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The map label for this gene is cadC [C]

Identifier: 51597367

GI number: 51597367

Start: 3605021

End: 3605680

Strand: Reverse

Name: cadC [C]

Synonym: YPTB3053

Alternate gene names: 51597367

Gene position: 3605680-3605021 (Counterclockwise)

Preceding gene: 51597369

Following gene: 51597366

Centisome position: 75.99

GC content: 32.88

Gene sequence:

>660_bases
ATGAATACGATAGTGATTAATGATGTTTTTTTTACGCCACAAAAGAGAACGATTGATAGGAATGGAAAGGTAACTAAAAT
AAGAAACAAAGAATCAGAGCTATTATCTTTACTTTGTGAGTATTATCCAGAGCCGATATCAAGGGAGGATATTGAGAAGA
GACTCTGGGAGGGGAGTTATGTTACTGATAATACATTGACTCAGACGATCAGTAATCTACGTCATGCACTTGATGATAAA
AAACACGAGTTAGTGGTTACTATTCCTAAAAAGGGGTATCGTATCGGTATTAAACCTGAAATTTTCATAGAGGGTGAAGT
TCAATGTCAACCTTATGAAAAATTGGGAATAATAGGTTCGTCTGTGGATAAAATGGCAATGTCTTTTTTAAAAGGAAAAA
TGTCATTTTATAGAGTCTGCCTATTTGTACTTGGTGTTATTTTCTTTTTTATATTTTTTAATGTGGCCTTGTACCGTTAT
CAAGTAAAGTTAGTAGATGTCAACTCTTTACCGATATTAATTAATTTGGATAAAGAACAAGATAAAACGTTTTTATCTGT
TTATCAGCAGCATCCTTATGTTTTACTGAAAAAGAAAAAAAATGGCGGCTATGTTGTTTGTAAACGCCAGGGAGACGAGT
TGGTATGCGAAAAAAAATAA

Upstream 100 bases:

>100_bases
TTAAATATAAAAAATCGTTTTATTAATAATTACAATTAGTTTTTCTTTGTTAGGATTACACTCAATGCTGAAATTTTAAA
CCAAAAACAATAAGAATATA

Downstream 100 bases:

>100_bases
TTTATTCGATATTATTTTCTATTCTCCTTGGGGGAGGGGTGGGGACAATTATTGGTATGATTTATGCCTATATACATCCG
ATGAAAAATCTTGAAGGCTA

Product: regulatory membrane protein.

Products: NA

Alternate protein names: Transcriptional Regulator CadC; Reguatory Protein

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNTIVINDVFFTPQKRTIDRNGKVTKIRNKESELLSLLCEYYPEPISREDIEKRLWEGSYVTDNTLTQTISNLRHALDDK
KHELVVTIPKKGYRIGIKPEIFIEGEVQCQPYEKLGIIGSSVDKMAMSFLKGKMSFYRVCLFVLGVIFFFIFFNVALYRY
QVKLVDVNSLPILINLDKEQDKTFLSVYQQHPYVLLKKKKNGGYVVCKRQGDELVCEKK

Sequences:

>Translated_219_residues
MNTIVINDVFFTPQKRTIDRNGKVTKIRNKESELLSLLCEYYPEPISREDIEKRLWEGSYVTDNTLTQTISNLRHALDDK
KHELVVTIPKKGYRIGIKPEIFIEGEVQCQPYEKLGIIGSSVDKMAMSFLKGKMSFYRVCLFVLGVIFFFIFFNVALYRY
QVKLVDVNSLPILINLDKEQDKTFLSVYQQHPYVLLKKKKNGGYVVCKRQGDELVCEKK
>Mature_219_residues
MNTIVINDVFFTPQKRTIDRNGKVTKIRNKESELLSLLCEYYPEPISREDIEKRLWEGSYVTDNTLTQTISNLRHALDDK
KHELVVTIPKKGYRIGIKPEIFIEGEVQCQPYEKLGIIGSSVDKMAMSFLKGKMSFYRVCLFVLGVIFFFIFFNVALYRY
QVKLVDVNSLPILINLDKEQDKTFLSVYQQHPYVLLKKKKNGGYVVCKRQGDELVCEKK

Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25505; Mature: 25505

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIVINDVFFTPQKRTIDRNGKVTKIRNKESELLSLLCEYYPEPISREDIEKRLWEGSY
CCEEEEEEEEECCCCCEECCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
VTDNTLTQTISNLRHALDDKKHELVVTIPKKGYRIGIKPEIFIEGEVQCQPYEKLGIIGS
CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCEEEEECCEEECCHHHHCCCCC
SVDKMAMSFLKGKMSFYRVCLFVLGVIFFFIFFNVALYRYQVKLVDVNSLPILINLDKEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCEEEEECCCCC
DKTFLSVYQQHPYVLLKKKKNGGYVVCKRQGDELVCEKK
CHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEECCC
>Mature Secondary Structure
MNTIVINDVFFTPQKRTIDRNGKVTKIRNKESELLSLLCEYYPEPISREDIEKRLWEGSY
CCEEEEEEEEECCCCCEECCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
VTDNTLTQTISNLRHALDDKKHELVVTIPKKGYRIGIKPEIFIEGEVQCQPYEKLGIIGS
CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCEEEEECCEEECCHHHHCCCCC
SVDKMAMSFLKGKMSFYRVCLFVLGVIFFFIFFNVALYRYQVKLVDVNSLPILINLDKEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCEEEEECCCCC
DKTFLSVYQQHPYVLLKKKKNGGYVVCKRQGDELVCEKK
CHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA