| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is lgt
Identifier: 51597349
GI number: 51597349
Start: 3581036
End: 3581908
Strand: Reverse
Name: lgt
Synonym: YPTB3034
Alternate gene names: 51597349
Gene position: 3581908-3581036 (Counterclockwise)
Preceding gene: 51597350
Following gene: 51597348
Centisome position: 75.49
GC content: 49.37
Gene sequence:
>873_bases ATGAGCAATAGCTATCTGGCGTTTCCTAAATTTGATCCGGTCATTTTCTCAATTGGTCCGGTTTCCCTCCATTGGTACGG CCTAATGTATTTGGTGGGCTTCGTGTTTGCGATGTGGCTCGCTGTCCGTCGTGCGAATAAGCCTGGTAGTGGTTGGACCA AAGAAGAAGTCGAAAACCTGCTGTACGCTGGTTTCCTTGGCGTCTTTATCGGTGGTCGCGTGGGTTATGTTCTGTTCTAT AACTTGCCGATGTTCCTCGATAACCCACTTTATCTGTTTAAAGTATGGGATGGCGGTATGTCATTCCATGGCGGTTTGAT TGGTGTCATTTGTGTCATGCTATGGTTTGCCCGTCGAACCAAACGCAATTTCTTCCAGGTTGCTGATTTTATTGCCCCGC TGATCCCTTTTGGTTTGGGCGCAGGGCGTCTGGGGAATTTTATCAATGCCGAACTTTGGGGGCGTGTCACTACCGATACC CCGTGGGCGATGTTATTCCCAACTTCCCGTAATACCGATATTGCCATCGTGGCCGCTGATCCTGCTAAATGGCAGGCGAT ATTTAATCAATACGGTGTCTTGCCGCGTCACCCCTCGCAACTGTACGAAATGATCCTCGAAGGGGTGGTGCTATTTATCA TCCTGAACGTGTTTATCCGCAAGCCACGTCCCATGGGCAGTGTCTCTGGGCTGTTCTTGATTGGTTATGGTACCTTCCGC ATCATTGTGGAGTGCTTCCGCCAACCAGACGAACAACTCGGCTTGTTCGAGGGCATGATCAGCATGGGGCAGATATTGTC TGTGCCTATGATTCTGGCCGGTATTATTATGATGATTTGGGCATATCGCCGTCCTACGCAAAAACTTTCGTGA
Upstream 100 bases:
>100_bases CTTTTCCTACTGGTGCTCCCCAGAGTGGCCTTGGCCTATGCTATTATGCGCTACCTGTAGCCCTAACTGGGCAAGAACGA TAGACATTTTGTGGTGATAG
Downstream 100 bases:
>100_bases GGTAACATGAAACAGTATCTGGATTTGATGAAAAAAGTGCTGGAAGAAGGCACACCTAAAGCTGACCGTACCGGTACCGG CACTCTGTCAATTTTTGGGC
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSNSYLAFPKFDPVIFSIGPVSLHWYGLMYLVGFVFAMWLAVRRANKPGSGWTKEEVENLLYAGFLGVFIGGRVGYVLFY NLPMFLDNPLYLFKVWDGGMSFHGGLIGVICVMLWFARRTKRNFFQVADFIAPLIPFGLGAGRLGNFINAELWGRVTTDT PWAMLFPTSRNTDIAIVAADPAKWQAIFNQYGVLPRHPSQLYEMILEGVVLFIILNVFIRKPRPMGSVSGLFLIGYGTFR IIVECFRQPDEQLGLFEGMISMGQILSVPMILAGIIMMIWAYRRPTQKLS
Sequences:
>Translated_290_residues MSNSYLAFPKFDPVIFSIGPVSLHWYGLMYLVGFVFAMWLAVRRANKPGSGWTKEEVENLLYAGFLGVFIGGRVGYVLFY NLPMFLDNPLYLFKVWDGGMSFHGGLIGVICVMLWFARRTKRNFFQVADFIAPLIPFGLGAGRLGNFINAELWGRVTTDT PWAMLFPTSRNTDIAIVAADPAKWQAIFNQYGVLPRHPSQLYEMILEGVVLFIILNVFIRKPRPMGSVSGLFLIGYGTFR IIVECFRQPDEQLGLFEGMISMGQILSVPMILAGIIMMIWAYRRPTQKLS >Mature_289_residues SNSYLAFPKFDPVIFSIGPVSLHWYGLMYLVGFVFAMWLAVRRANKPGSGWTKEEVENLLYAGFLGVFIGGRVGYVLFYN LPMFLDNPLYLFKVWDGGMSFHGGLIGVICVMLWFARRTKRNFFQVADFIAPLIPFGLGAGRLGNFINAELWGRVTTDTP WAMLFPTSRNTDIAIVAADPAKWQAIFNQYGVLPRHPSQLYEMILEGVVLFIILNVFIRKPRPMGSVSGLFLIGYGTFRI IVECFRQPDEQLGLFEGMISMGQILSVPMILAGIIMMIWAYRRPTQKLS
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=292, Percent_Identity=77.7397260273973, Blast_Score=461, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_YERP3 (A7FFD9)
Other databases:
- EMBL: CP000720 - RefSeq: YP_001399967.1 - STRING: A7FFD9 - GeneID: 5388159 - GenomeReviews: CP000720_GR - KEGG: ypi:YpsIP31758_0983 - eggNOG: COG0682 - HOGENOM: HBG450278 - OMA: NPIAFSL - ProtClustDB: PRK00052 - BioCyc: YPSE349747:YPSIP31758_0983-MONOMER - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 32809; Mature: 32678
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1b3d47d8)-; HASH(0x19ade5c4)-; HASH(0x1d14aed8)-; HASH(0x1d6887ac)-; HASH(0x18a349ac)-; HASH(0x18a3497c)-; HASH(0x1c6d8840)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSYLAFPKFDPVIFSIGPVSLHWYGLMYLVGFVFAMWLAVRRANKPGSGWTKEEVENL CCCCEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LYAGFLGVFIGGRVGYVLFYNLPMFLDNPLYLFKVWDGGMSFHGGLIGVICVMLWFARRT HHHHHHHHHHCCHHEEHHEEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH KRNFFQVADFIAPLIPFGLGAGRLGNFINAELWGRVTTDTPWAMLFPTSRNTDIAIVAAD HHHHHHHHHHHHHHHHHCCCCHHHCCHHCHHHCCEEECCCCEEEEEECCCCCCEEEEECC PAKWQAIFNQYGVLPRHPSQLYEMILEGVVLFIILNVFIRKPRPMGSVSGLFLIGYGTFR CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHH IIVECFRQPDEQLGLFEGMISMGQILSVPMILAGIIMMIWAYRRPTQKLS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH >Mature Secondary Structure SNSYLAFPKFDPVIFSIGPVSLHWYGLMYLVGFVFAMWLAVRRANKPGSGWTKEEVENL CCCEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LYAGFLGVFIGGRVGYVLFYNLPMFLDNPLYLFKVWDGGMSFHGGLIGVICVMLWFARRT HHHHHHHHHHCCHHEEHHEEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH KRNFFQVADFIAPLIPFGLGAGRLGNFINAELWGRVTTDTPWAMLFPTSRNTDIAIVAAD HHHHHHHHHHHHHHHHHCCCCHHHCCHHCHHHCCEEECCCCEEEEEECCCCCCEEEEECC PAKWQAIFNQYGVLPRHPSQLYEMILEGVVLFIILNVFIRKPRPMGSVSGLFLIGYGTFR CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHH IIVECFRQPDEQLGLFEGMISMGQILSVPMILAGIIMMIWAYRRPTQKLS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA