| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is fabZ
Identifier: 51597307
GI number: 51597307
Start: 3530012
End: 3530542
Strand: Reverse
Name: fabZ
Synonym: YPTB2992
Alternate gene names: 51597307
Gene position: 3530542-3530012 (Counterclockwise)
Preceding gene: 51597308
Following gene: 51597306
Centisome position: 74.41
GC content: 47.46
Gene sequence:
>531_bases TTGACTACTGACACTCATACTCTGCATATTGAAGAGATTTTGGATCTACTCCCGCACCGTTTTCCGTTCTTGCTGGTAGA CCGTGTCCTTGATTTTGAGGAAGGAAAATTTCTGCGTGCAGTGAAGAACGTCTCTTTTAACGAGCCATTTTTCCAAGGCC ATTTCCCAGGCAAGCCCATCTTCCCTGGTGTGCTTATATTAGAAGCGATGGCGCAGGCTACAGGGATTTTGGCGTTTAAG AGCCGCGGTAAACTGGAACCGGGCGAGCTTTATTACTTTGCTGGTATTGATGAAGCACGTTTTAAGCGCCCAGTAGTGCC TGGCGATCAGATGATCATGGAAGTTGAGTTTGTTAAAGAACGCCGTGGCCTAACCCGTTTTACCGGTGTAGCTAAAGTCG ATGGCGAAATCGTTTGCACTGCCACCATGATGTGCGCGCGTAGCAAACCAGCAGCACCTGCAGAATCTGTCGTTGTAAAA CCAGATGTTGTAAAACCAGATGTTGTAAATCCTGTCGTTAAGGAGTCCTGA
Upstream 100 bases:
>100_bases GTCTACAGAGTTCCTAATTTGCGGCCTGCCTAATGCCTCCCTTTGGGGCTGTGCAGGCCGTGTTGTTGATAGCATCAGTT TTTTAGACAGGAAGAGTATT
Downstream 100 bases:
>100_bases TTCGTGATTGACAAAACCGCCTTTATCCATCCAAGTTCTATCGTTGAAGAAGGTGCCATCATTGGCGCTGGTGTTTATAT TGGGCCCTTCTGCATTGTCG
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTTDTHTLHIEEILDLLPHRFPFLLVDRVLDFEEGKFLRAVKNVSFNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFK SRGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVEFVKERRGLTRFTGVAKVDGEIVCTATMMCARSKPAAPAESVVVK PDVVKPDVVNPVVKES
Sequences:
>Translated_176_residues MTTDTHTLHIEEILDLLPHRFPFLLVDRVLDFEEGKFLRAVKNVSFNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFK SRGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVEFVKERRGLTRFTGVAKVDGEIVCTATMMCARSKPAAPAESVVVK PDVVKPDVVNPVVKES >Mature_175_residues TTDTHTLHIEEILDLLPHRFPFLLVDRVLDFEEGKFLRAVKNVSFNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKS RGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVEFVKERRGLTRFTGVAKVDGEIVCTATMMCARSKPAAPAESVVVKP DVVKPDVVNPVVKES
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=151, Percent_Identity=89.4039735099338, Blast_Score=277, Evalue=3e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 19631; Mature: 19500
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDTHTLHIEEILDLLPHRFPFLLVDRVLDFEEGKFLRAVKNVSFNEPFFQGHFPGKPI CCCCCCEEEHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC FPGVLILEAMAQATGILAFKSRGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVEFVKE CHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHH RRGLTRFTGVAKVDGEIVCTATMMCARSKPAAPAESVVVKPDVVKPDVVNPVVKES HCCCHHHCCEEECCCCEEEHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCHHCCC >Mature Secondary Structure TTDTHTLHIEEILDLLPHRFPFLLVDRVLDFEEGKFLRAVKNVSFNEPFFQGHFPGKPI CCCCCEEEHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC FPGVLILEAMAQATGILAFKSRGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVEFVKE CHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHH RRGLTRFTGVAKVDGEIVCTATMMCARSKPAAPAESVVVKPDVVKPDVVNPVVKES HCCCHHHCCEEECCCCEEEHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]