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The map label for this gene is yaeJ [H]

Identifier: 51597295

GI number: 51597295

Start: 3518392

End: 3518832

Strand: Reverse

Name: yaeJ [H]

Synonym: YPTB2980

Alternate gene names: 51597295

Gene position: 3518832-3518392 (Counterclockwise)

Preceding gene: 51597296

Following gene: 51597294

Centisome position: 74.16

GC content: 48.75

Gene sequence:

>441_bases
ATGGCAAAACTACGGGCAATAAGTGTGTTGATTATCTCTAATAGTGTCACGCTAGCCAGCGGCGAGATTGAGCTGACCGC
GATCCGGGCGCAGGGCGCTGGAGGCCAGCATGTTAATAAAACCTCAACTGCGATTCATTTGCGCTTTGACATTAAGGCCT
CAAGCCTGCCAGAGTATTATAAAGAAAGGTTATTGTTGCTAAATAGCCATTTGGTGACAGCTGAAGGTGTTGTCATCATA
AAAGCACAGGAATACCGCAGCCAAGATATGAACCGTGAGGCTGCATTGGCGCGCTTGGTAGCACTCATTCGCCAGGCAAT
GGTGGTAGAAAAGGCCCGTCGAGCGACAAAACCAACCAAAGGTTCAAAAATCAGGCGAGTTGAGGGTAAAGTCCGCAAAG
GGGCGACAAAAGCGCTGCGTGGTAAAATACATCAAGAGTGA

Upstream 100 bases:

>100_bases
CTGCGCTGTCTAACCGCAATATGTCATTACAGGCGACACTGCAAGAAGGGACTATCTGGCTATCAGATGTACAGAATAAT
CTGGAAATTAGTTTTGCCGA

Downstream 100 bases:

>100_bases
AGTCGATATTCATATGAACGTTGATACATTGCGGTTGATATGACTTCATTCCATATATATCGGACACAGTATGGGAGAAT
CACTGTGAGTAAATTAACGA

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MAKLRAISVLIISNSVTLASGEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLVTAEGVVII
KAQEYRSQDMNREAALARLVALIRQAMVVEKARRATKPTKGSKIRRVEGKVRKGATKALRGKIHQE

Sequences:

>Translated_146_residues
MAKLRAISVLIISNSVTLASGEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLVTAEGVVII
KAQEYRSQDMNREAALARLVALIRQAMVVEKARRATKPTKGSKIRRVEGKVRKGATKALRGKIHQE
>Mature_145_residues
AKLRAISVLIISNSVTLASGEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLVTAEGVVIIK
AQEYRSQDMNREAALARLVALIRQAMVVEKARRATKPTKGSKIRRVEGKVRKGATKALRGKIHQE

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=135, Percent_Identity=65.1851851851852, Blast_Score=190, Evalue=3e-50,
Organism=Drosophila melanogaster, GI19921098, Length=91, Percent_Identity=37.3626373626374, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 16080; Mature: 15949

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLRAISVLIISNSVTLASGEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYY
CCCCEEEEEEEEECCEEEECCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHH
KERLLLLNSHLVTAEGVVIIKAQEYRSQDMNREAALARLVALIRQAMVVEKARRATKPTK
HHHHHHHCCCEEEECCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GSKIRRVEGKVRKGATKALRGKIHQE
CCEEHHHHHHHHHCHHHHHHCCCCCC
>Mature Secondary Structure 
AKLRAISVLIISNSVTLASGEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYY
CCCEEEEEEEEECCEEEECCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHH
KERLLLLNSHLVTAEGVVIIKAQEYRSQDMNREAALARLVALIRQAMVVEKARRATKPTK
HHHHHHHCCCEEEECCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GSKIRRVEGKVRKGATKALRGKIHQE
CCEEHHHHHHHHHCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635807; 9278503; 7635808 [H]