| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is pucI [H]
Identifier: 51597278
GI number: 51597278
Start: 3496321
End: 3497832
Strand: Direct
Name: pucI [H]
Synonym: YPTB2963
Alternate gene names: 51597278
Gene position: 3496321-3497832 (Clockwise)
Preceding gene: 51597276
Following gene: 51597280
Centisome position: 73.69
GC content: 48.68
Gene sequence:
>1512_bases ATGTTGCCTTTGGAAGGAACGCGCTTTATGCCAAATAATGAAAAAATCTCGGCTAGCAGCATTAACCCCCACTACAGTCC CAAACTCACTAATGAAGATCTGGCCCCAACTCGTAAGCAGAACTGGGGCTGGTACAATATCTTTTCATTTTGGATGACGG ATGTGCACAGCATGGGGGGTTATGTGGTCGCCGCCAGCTTCTTTGCTCTCGGGCTATCCAGTTGGCAAGTGCTGTTATCG CTATTAGTCGGTATTTGCATTGTACAAATTTGCGCCAATCTGGTGGCCAAACCAAGCCAGATAGCCGGTGTGCCCTATGC CGTTATCTGTCGACAATCTTTTGGGGTATTTGGAGCAAATATCCCAGCCGTTATCCGTGGGCTGATCGCCGTTGCCTGGT ATGGCATTCAAACCTATCTGGCGGGTAATGCTTTTATGCTCGTGATGCTGAAATTCTTCCCCAGCCTGATCCCCCTGACT CAGAGCCAATGGCTAGGGTTATCCACCCTCGGCTGGATCTGTTTCTCCATTATGTGGGTACTGCAGGCGATGGTGTTCTG GCATGGGATGAATGCGATTAAGCGCTTTATTGATTTTGCCGGGCCGGCAGTCTATGTCGTGATGCTGTCATTGGCGTTAT GGATTGTCTATCAAACCGGCTGGAGTAACATTTCATTCACCCTCGCCAGTAAAATCTTAAGCCCATCAGAACAGGTCTGG CAGATGCTGACGGCAACCGCGCTGGTCGTCTCTTATTTTGCCGGGCCATTACTGAACTTTGGTGATTTCTCCCGCTATGG CAAAAGTATGCAGGAAATCCGCCGAGGCAACCGATGGGGGCTACCCTTTAACTTCCTCCTGTTCTCTCTCGTCACCGTGG TGATTGTCTCCGGCTCACAGTCGCTGTTCGGTGAAATGATTACCGACCCTATCGAGACCGTTACCCGCGTCGGCAATGGC GTGGCTATCGCTCTAGGTCTACTGACCATGATTATCGCCACTATCGGGATTAATATCGTCGCAAACTTTGTTTCACCCGC CTTTGATTTTTCTAACTGTTCACCACAAAGAATCAACTTCCGTACTGGTGGGATGATAGCTGCGGTAGGTTCAGTTTTGC TTACCCCATGGAACCTGTTCCAATCACCAATCATTATCCACTACACCCTGGACGTGCTGGGTGCCTTTATGGGGCCGCTA TTTGGTATTTTAATCGCTGATTTTTATCTGATTAAACGCGGCCAATTATATGTAGATGATCTGTTTAATGCTTCATCATC AGGACGTTATTGGTATCGCGGAGGTTTTAATCCGAAAGCGATTATGGCGTTACTGCCCGCAGTGGCCATTGGCTTGATGA TCATTTTCATCCCCAACCTACAGCAGATCTCCAGTTTCAGTTGGTTTATCGGGGCGTTTCTTGGCGGGAGTATTTATCGC TTTATTGCACGCAATGACCCATTGCCGAACAATGCGGCTCTGTTTATACGCCCTGAAATAGGCAAAGATTGA
Upstream 100 bases:
>100_bases ATACAACAATTTTTAGTCTGAGTTCTGCAAATATCTCTAGCCCTAACTCTGTAAATATTTCTCATGTGAGGTTCGACAAA CCTTGTCTCACATCATCTGA
Downstream 100 bases:
>100_bases GTTAAGCAGAAACGACAAAGCCCTGAGTTATTACTTAACTCAGGGCTTCTAAATTTTGGCGGTGCGGACGGGACTCGAAC CCGCGACCCCCGGCGTGACA
Product: nucleobase:cation symporter
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MLPLEGTRFMPNNEKISASSINPHYSPKLTNEDLAPTRKQNWGWYNIFSFWMTDVHSMGGYVVAASFFALGLSSWQVLLS LLVGICIVQICANLVAKPSQIAGVPYAVICRQSFGVFGANIPAVIRGLIAVAWYGIQTYLAGNAFMLVMLKFFPSLIPLT QSQWLGLSTLGWICFSIMWVLQAMVFWHGMNAIKRFIDFAGPAVYVVMLSLALWIVYQTGWSNISFTLASKILSPSEQVW QMLTATALVVSYFAGPLLNFGDFSRYGKSMQEIRRGNRWGLPFNFLLFSLVTVVIVSGSQSLFGEMITDPIETVTRVGNG VAIALGLLTMIIATIGINIVANFVSPAFDFSNCSPQRINFRTGGMIAAVGSVLLTPWNLFQSPIIIHYTLDVLGAFMGPL FGILIADFYLIKRGQLYVDDLFNASSSGRYWYRGGFNPKAIMALLPAVAIGLMIIFIPNLQQISSFSWFIGAFLGGSIYR FIARNDPLPNNAALFIRPEIGKD
Sequences:
>Translated_503_residues MLPLEGTRFMPNNEKISASSINPHYSPKLTNEDLAPTRKQNWGWYNIFSFWMTDVHSMGGYVVAASFFALGLSSWQVLLS LLVGICIVQICANLVAKPSQIAGVPYAVICRQSFGVFGANIPAVIRGLIAVAWYGIQTYLAGNAFMLVMLKFFPSLIPLT QSQWLGLSTLGWICFSIMWVLQAMVFWHGMNAIKRFIDFAGPAVYVVMLSLALWIVYQTGWSNISFTLASKILSPSEQVW QMLTATALVVSYFAGPLLNFGDFSRYGKSMQEIRRGNRWGLPFNFLLFSLVTVVIVSGSQSLFGEMITDPIETVTRVGNG VAIALGLLTMIIATIGINIVANFVSPAFDFSNCSPQRINFRTGGMIAAVGSVLLTPWNLFQSPIIIHYTLDVLGAFMGPL FGILIADFYLIKRGQLYVDDLFNASSSGRYWYRGGFNPKAIMALLPAVAIGLMIIFIPNLQQISSFSWFIGAFLGGSIYR FIARNDPLPNNAALFIRPEIGKD >Mature_503_residues MLPLEGTRFMPNNEKISASSINPHYSPKLTNEDLAPTRKQNWGWYNIFSFWMTDVHSMGGYVVAASFFALGLSSWQVLLS LLVGICIVQICANLVAKPSQIAGVPYAVICRQSFGVFGANIPAVIRGLIAVAWYGIQTYLAGNAFMLVMLKFFPSLIPLT QSQWLGLSTLGWICFSIMWVLQAMVFWHGMNAIKRFIDFAGPAVYVVMLSLALWIVYQTGWSNISFTLASKILSPSEQVW QMLTATALVVSYFAGPLLNFGDFSRYGKSMQEIRRGNRWGLPFNFLLFSLVTVVIVSGSQSLFGEMITDPIETVTRVGNG VAIALGLLTMIIATIGINIVANFVSPAFDFSNCSPQRINFRTGGMIAAVGSVLLTPWNLFQSPIIIHYTLDVLGAFMGPL FGILIADFYLIKRGQLYVDDLFNASSSGRYWYRGGFNPKAIMALLPAVAIGLMIIFIPNLQQISSFSWFIGAFLGGSIYR FIARNDPLPNNAALFIRPEIGKD
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=459, Percent_Identity=28.7581699346405, Blast_Score=207, Evalue=9e-55, Organism=Saccharomyces cerevisiae, GI6322219, Length=438, Percent_Identity=23.0593607305936, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6319495, Length=435, Percent_Identity=22.5287356321839, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6319429, Length=438, Percent_Identity=21.0045662100457, Blast_Score=115, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6324766, Length=439, Percent_Identity=22.3234624145786, Blast_Score=106, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6323266, Length=439, Percent_Identity=23.2346241457859, Blast_Score=106, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6324645, Length=446, Percent_Identity=21.7488789237668, Blast_Score=100, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 55557; Mature: 55557
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLEGTRFMPNNEKISASSINPHYSPKLTNEDLAPTRKQNWGWYNIFSFWMTDVHSMGG CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC YVVAASFFALGLSSWQVLLSLLVGICIVQICANLVAKPSQIAGVPYAVICRQSFGVFGAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCCCCCC IPAVIRGLIAVAWYGIQTYLAGNAFMLVMLKFFPSLIPLTQSQWLGLSTLGWICFSIMWV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHH LQAMVFWHGMNAIKRFIDFAGPAVYVVMLSLALWIVYQTGWSNISFTLASKILSPSEQVW HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHH QMLTATALVVSYFAGPLLNFGDFSRYGKSMQEIRRGNRWGLPFNFLLFSLVTVVIVSGSQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCH SLFGEMITDPIETVTRVGNGVAIALGLLTMIIATIGINIVANFVSPAFDFSNCSPQRINF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEC RTGGMIAAVGSVLLTPWNLFQSPIIIHYTLDVLGAFMGPLFGILIADFYLIKRGQLYVDD CCCCHHHHHHHHHHCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHH LFNASSSGRYWYRGGFNPKAIMALLPAVAIGLMIIFIPNLQQISSFSWFIGAFLGGSIYR HHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FIARNDPLPNNAALFIRPEIGKD HHHCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MLPLEGTRFMPNNEKISASSINPHYSPKLTNEDLAPTRKQNWGWYNIFSFWMTDVHSMGG CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC YVVAASFFALGLSSWQVLLSLLVGICIVQICANLVAKPSQIAGVPYAVICRQSFGVFGAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCCCCCC IPAVIRGLIAVAWYGIQTYLAGNAFMLVMLKFFPSLIPLTQSQWLGLSTLGWICFSIMWV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHH LQAMVFWHGMNAIKRFIDFAGPAVYVVMLSLALWIVYQTGWSNISFTLASKILSPSEQVW HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHH QMLTATALVVSYFAGPLLNFGDFSRYGKSMQEIRRGNRWGLPFNFLLFSLVTVVIVSGSQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCH SLFGEMITDPIETVTRVGNGVAIALGLLTMIIATIGINIVANFVSPAFDFSNCSPQRINF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEC RTGGMIAAVGSVLLTPWNLFQSPIIIHYTLDVLGAFMGPLFGILIADFYLIKRGQLYVDD CCCCHHHHHHHHHHCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHH LFNASSSGRYWYRGGFNPKAIMALLPAVAIGLMIIFIPNLQQISSFSWFIGAFLGGSIYR HHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FIARNDPLPNNAALFIRPEIGKD HHHCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]