| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597222
Identifier: 51597222
GI number: 51597222
Start: 3436730
End: 3437749
Strand: Reverse
Name: 51597222
Synonym: YPTB2906
Alternate gene names: NA
Gene position: 3437749-3436730 (Counterclockwise)
Preceding gene: 51597223
Following gene: 51597221
Centisome position: 72.45
GC content: 50.39
Gene sequence:
>1020_bases ATGATTTTCCAACAACAATACTTATATTGGCTGGCCGGAGTGGTGCTATTGATTGTCGCGGTGATGTCATTTCGTGATAA AGCCAATCCAAGGCGCTTAACCACCGGTTTGTTTTGGGGGTTGTATGGCTTGATTTTTCTGGTTGGCGATTGGACTTATC GGCTGGCGAATGCGCTGGCGGGCGAAGGCCCAGATGAGAAACGCGTCCTGAATATTATTGTGGGTCTGGTCGTGGTGGTC ATGGCATTGATTGCCGGGTTTGGTGGTGTAAAGCTGGGCAGTTACCACCAACGGACGCCGCAAGAGCGTGAAGTTAGCGC AAAACGTTTAGGTAATCGGCTATTTATTCCAGCATTAGCTATCCCATTGGTTACGGTTATCGGTGTGCTGTTGTTCAATA ACATACCGGCTCTGCAACAAGGGATGTTTGGTCCGGGTAACCACTCCACGCTAGTGACGCTATTTTCAATGACGGTCGGT TGTGTTCTTGGCTTGGTCCTTGCCGTGGCGATGACCCGTGAGACGGCGGCGCAACCGGTACAGGAAGCGCGCCGCTTGCT GGATTCTATCGGCTGGGCATTTATTCTGCCGCAAATTCTGGCGACACTGGGGTTACTATTTACTGGCGCGGGTGTCGGGA CGGCCATTGCTCATCTTACGCAAGAATATCTGGCCGTCGACCAGCGCTTTATTGCTGTTGCGGTCTATGCTATTGGCATG GCGCTGTTAACCATGATCATGGGTAATGCGTTCGCCGCTTTCCCGATAGTGACTGCCGGTATTGGTATTCCTATTTTAGT GTTACAACACGGGGGAAACCCGGCAGTGATGGCGGCCATCGGCATGTTCTCTGGCTATTGTGGGATATTGATGACACCGA TGGCGGCCAATTATAATATTGTTCCGGCCGCATTATTGGAATTGCCGGACAAAAATGCGGTCATCAAAGCGCAAATCCCA ACCGGGGTAGCTCTGTTGATTGTTAACGTATTTTTACTGTATTTCCTGATGTTTCTCTAA
Upstream 100 bases:
>100_bases TCCTGATCCATGCCTACCGTTTACAGCGGTTAGATAAACAACTTGCTGCGGAATTAACGGCGCTGAATCAGTCTGCCCTG GCAGCTCAGGGAGAGGCTAA
Downstream 100 bases:
>100_bases GGAGAGGCGATGAGACGTGTATTAATTACCGGGTTCGAACCTTTTGGGGGGGAGCGGATCAATCCTTCCTGGGAAGTGGT CAAACAAATGAATGATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MIFQQQYLYWLAGVVLLIVAVMSFRDKANPRRLTTGLFWGLYGLIFLVGDWTYRLANALAGEGPDEKRVLNIIVGLVVVV MALIAGFGGVKLGSYHQRTPQEREVSAKRLGNRLFIPALAIPLVTVIGVLLFNNIPALQQGMFGPGNHSTLVTLFSMTVG CVLGLVLAVAMTRETAAQPVQEARRLLDSIGWAFILPQILATLGLLFTGAGVGTAIAHLTQEYLAVDQRFIAVAVYAIGM ALLTMIMGNAFAAFPIVTAGIGIPILVLQHGGNPAVMAAIGMFSGYCGILMTPMAANYNIVPAALLELPDKNAVIKAQIP TGVALLIVNVFLLYFLMFL
Sequences:
>Translated_339_residues MIFQQQYLYWLAGVVLLIVAVMSFRDKANPRRLTTGLFWGLYGLIFLVGDWTYRLANALAGEGPDEKRVLNIIVGLVVVV MALIAGFGGVKLGSYHQRTPQEREVSAKRLGNRLFIPALAIPLVTVIGVLLFNNIPALQQGMFGPGNHSTLVTLFSMTVG CVLGLVLAVAMTRETAAQPVQEARRLLDSIGWAFILPQILATLGLLFTGAGVGTAIAHLTQEYLAVDQRFIAVAVYAIGM ALLTMIMGNAFAAFPIVTAGIGIPILVLQHGGNPAVMAAIGMFSGYCGILMTPMAANYNIVPAALLELPDKNAVIKAQIP TGVALLIVNVFLLYFLMFL >Mature_339_residues MIFQQQYLYWLAGVVLLIVAVMSFRDKANPRRLTTGLFWGLYGLIFLVGDWTYRLANALAGEGPDEKRVLNIIVGLVVVV MALIAGFGGVKLGSYHQRTPQEREVSAKRLGNRLFIPALAIPLVTVIGVLLFNNIPALQQGMFGPGNHSTLVTLFSMTVG CVLGLVLAVAMTRETAAQPVQEARRLLDSIGWAFILPQILATLGLLFTGAGVGTAIAHLTQEYLAVDQRFIAVAVYAIGM ALLTMIMGNAFAAFPIVTAGIGIPILVLQHGGNPAVMAAIGMFSGYCGILMTPMAANYNIVPAALLELPDKNAVIKAQIP TGVALLIVNVFLLYFLMFL
Specific function: Unknown
COG id: COG3817
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36357; Mature: 36357
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFQQQYLYWLAGVVLLIVAVMSFRDKANPRRLTTGLFWGLYGLIFLVGDWTYRLANALA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GEGPDEKRVLNIIVGLVVVVMALIAGFGGVKLGSYHQRTPQEREVSAKRLGNRLFIPALA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH IPLVTVIGVLLFNNIPALQQGMFGPGNHSTLVTLFSMTVGCVLGLVLAVAMTRETAAQPV HHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEARRLLDSIGWAFILPQILATLGLLFTGAGVGTAIAHLTQEYLAVDQRFIAVAVYAIGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLTMIMGNAFAAFPIVTAGIGIPILVLQHGGNPAVMAAIGMFSGYCGILMTPMAANYNI HHHHHHHCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCC VPAALLELPDKNAVIKAQIPTGVALLIVNVFLLYFLMFL HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MIFQQQYLYWLAGVVLLIVAVMSFRDKANPRRLTTGLFWGLYGLIFLVGDWTYRLANALA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GEGPDEKRVLNIIVGLVVVVMALIAGFGGVKLGSYHQRTPQEREVSAKRLGNRLFIPALA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH IPLVTVIGVLLFNNIPALQQGMFGPGNHSTLVTLFSMTVGCVLGLVLAVAMTRETAAQPV HHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEARRLLDSIGWAFILPQILATLGLLFTGAGVGTAIAHLTQEYLAVDQRFIAVAVYAIGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLTMIMGNAFAAFPIVTAGIGIPILVLQHGGNPAVMAAIGMFSGYCGILMTPMAANYNI HHHHHHHCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCC VPAALLELPDKNAVIKAQIPTGVALLIVNVFLLYFLMFL HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA