| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yegS [C]
Identifier: 51597137
GI number: 51597137
Start: 3336826
End: 3337716
Strand: Direct
Name: yegS [C]
Synonym: YPTB2821
Alternate gene names: 51597137
Gene position: 3336826-3337716 (Clockwise)
Preceding gene: 51597136
Following gene: 51597139
Centisome position: 70.33
GC content: 51.96
Gene sequence:
>891_bases ATGCCACACACTCTTTTGATCCTCAACGGCAAAGAATCAGGCAACCCTGAGGTCCGCGAAGCGGTCAAAAACGTACGCGA CGAAGGCTTAACGCTTCATGTCCGTATCACCTGGGAGCACGGTGATGCAAAACGCTATGTTGAAGAGGCCGCCACCTTGG CTGTCAGTACCGTTATCGCTGGAGGCGGCGATGGCACCATTAATGAAGTGGCAACAGCATTGATGAGTTTACCTGCGGAT AAACGCCCTTGTCTGGGGATCCTACCGCTGGGAACCGCCAATGATTTTGCGACTGGCTGCAATATCCCTTTGCAAATAGA GAACGCACTGCAACTGGCGGTCAAAGGCCGGGCGGTGGCAATCGATCTGGCTCAAGTCAACGGTGAGCATTACTTTATCA ATATGGCAACCGGGGGTTTTGGTACCCGAATTACCACCGAAACACCCGATAAACTCAAAGCGGCCTTGGGCGGAGTCTCT TACTTTATTCATGGGCTGATGCGCCTTGATGCCCTAAAAGCAGACAGCTGTAAAATCCATGGCCCTGACTTTCATTGGTC GGGGGATGCGCTGGTCATTGGCATCGGCAACGGTAAACAGGCCGGGGGCGGACAACTTCTTTGCCCCGATGCACTGATTA ATGACGGCCTGATGCAATTACGCCTACTGACAGCAAAGGAGTTACTCCCTGCAGTGCTGAGTACCCTGTTCAATGGTGAG AAAAATAAGAATGTTATCGACGCCACGGTACCTTGGCTCGATATCACTGCACCGAACGATATCACCTTCAATCTGGATGG TGAGCCACTGTCCGGCAGATATTTCCACATTGAAATCTTACCCCATGCGATTCAGTGCCGGCTACCACCGAATTGCCCGT TGTTAGGCTAA
Upstream 100 bases:
>100_bases CGAGTGCAGCTAATTTTTCACCGATACAAGCCTCATCGATACAAGTACTGCTGCAGCACCAAGAATGAAGGGACTCCCAT ATAAATGATTTGGAGCACAT
Downstream 100 bases:
>100_bases ACGCCACTTAGCCCTACACACTCAGTGCCATCTGGAGGACGGCGGGCGACGAGTGTAGAACACGATAAATGAATGATAAA ACGTGTGAAATGCGGCAGAA
Product: lipid kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MPHTLLILNGKESGNPEVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLAVSTVIAGGGDGTINEVATALMSLPAD KRPCLGILPLGTANDFATGCNIPLQIENALQLAVKGRAVAIDLAQVNGEHYFINMATGGFGTRITTETPDKLKAALGGVS YFIHGLMRLDALKADSCKIHGPDFHWSGDALVIGIGNGKQAGGGQLLCPDALINDGLMQLRLLTAKELLPAVLSTLFNGE KNKNVIDATVPWLDITAPNDITFNLDGEPLSGRYFHIEILPHAIQCRLPPNCPLLG
Sequences:
>Translated_296_residues MPHTLLILNGKESGNPEVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLAVSTVIAGGGDGTINEVATALMSLPAD KRPCLGILPLGTANDFATGCNIPLQIENALQLAVKGRAVAIDLAQVNGEHYFINMATGGFGTRITTETPDKLKAALGGVS YFIHGLMRLDALKADSCKIHGPDFHWSGDALVIGIGNGKQAGGGQLLCPDALINDGLMQLRLLTAKELLPAVLSTLFNGE KNKNVIDATVPWLDITAPNDITFNLDGEPLSGRYFHIEILPHAIQCRLPPNCPLLG >Mature_295_residues PHTLLILNGKESGNPEVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLAVSTVIAGGGDGTINEVATALMSLPADK RPCLGILPLGTANDFATGCNIPLQIENALQLAVKGRAVAIDLAQVNGEHYFINMATGGFGTRITTETPDKLKAALGGVSY FIHGLMRLDALKADSCKIHGPDFHWSGDALVIGIGNGKQAGGGQLLCPDALINDGLMQLRLLTAKELLPAVLSTLFNGEK NKNVIDATVPWLDITAPNDITFNLDGEPLSGRYFHIEILPHAIQCRLPPNCPLLG
Specific function: Probably phosphorylates lipids; the in vivo substrate is unknown [H]
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=295, Percent_Identity=67.7966101694915, Blast_Score=417, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005218 - InterPro: IPR001206 - InterPro: IPR022433 - InterPro: IPR022862 [H]
Pfam domain/function: PF00781 DAGK_cat [H]
EC number: NA
Molecular weight: Translated: 31562; Mature: 31431
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHTLLILNGKESGNPEVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLAVSTVIA CCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHHEEEEEEE GGGDGTINEVATALMSLPADKRPCLGILPLGTANDFATGCNIPLQIENALQLAVKGRAVA CCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCEEEEEECCCEEE IDLAQVNGEHYFINMATGGFGTRITTETPDKLKAALGGVSYFIHGLMRLDALKADSCKIH EEEEEECCCEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE GPDFHWSGDALVIGIGNGKQAGGGQLLCPDALINDGLMQLRLLTAKELLPAVLSTLFNGE CCCCEECCCEEEEECCCCCCCCCCCEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC KNKNVIDATVPWLDITAPNDITFNLDGEPLSGRYFHIEILPHAIQCRLPPNCPLLG CCCEEEEEECCEEEEECCCCEEEEECCCCCCCEEEEEEEECCEEEEECCCCCCCCC >Mature Secondary Structure PHTLLILNGKESGNPEVREAVKNVRDEGLTLHVRITWEHGDAKRYVEEAATLAVSTVIA CCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHHEEEEEEE GGGDGTINEVATALMSLPADKRPCLGILPLGTANDFATGCNIPLQIENALQLAVKGRAVA CCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCEEEEEECCCEEE IDLAQVNGEHYFINMATGGFGTRITTETPDKLKAALGGVSYFIHGLMRLDALKADSCKIH EEEEEECCCEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE GPDFHWSGDALVIGIGNGKQAGGGQLLCPDALINDGLMQLRLLTAKELLPAVLSTLFNGE CCCCEECCCEEEEECCCCCCCCCCCEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC KNKNVIDATVPWLDITAPNDITFNLDGEPLSGRYFHIEILPHAIQCRLPPNCPLLG CCCEEEEEECCEEEEECCCCEEEEECCCCCCCEEEEEEEECCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA