Click here to switch to the map view.

The map label for this gene is napF

Identifier: 51597078

GI number: 51597078

Start: 3262446

End: 3262949

Strand: Reverse

Name: napF

Synonym: YPTB2762

Alternate gene names: 51597078

Gene position: 3262949-3262446 (Counterclockwise)

Preceding gene: 51597080

Following gene: 51597077

Centisome position: 68.77

GC content: 52.98

Gene sequence:

>504_bases
ATGACTGATTTATCGCGGCGTAAATTGCTGACGGGTTTTTGGCAAACCGGTAAACAAGCGAACATTATTATCCGGCCTCC
CTGGTCGGTATCTGAGGTTGACTTTATTGCGGGTTGCACCCGTTGCCATGCCTGTGTCAGCGCCTGTGAAACTGGCGTAT
TGATTGCGGGCAGTGGTGGATTCCCCGAAATAGATTTTCAACGTGCTGAGTGCAGCTTTTGTCAGGCCTGTGTCCAGGCG
TGCGAGGCGGCCATTTTTACCTCGGTAGAGCAGACGGCTTGGCAGATTAAAGCCAGTATCTCTGACCGTTGTTTGCCTTA
TCACCAGGTTGAATGTCGCAGTTGCCAGGATAGCTGTGAAACCCGTGCAATTAAATTTCGCCCACGCTTGAGCGGCATTG
CTCAACCTGAATTAGACCTTCCTGCCTGTACCGGCTGCGGCGCTTGTGTGCCGGGGTGTCCAGTGCAGGCGGTAACCCTT
ACCCGGAGTGAAGATGGACGATAA

Upstream 100 bases:

>100_bases
TAAGAATTATTATCATTAGCTGCCTGTTTGGGCTTTAAATGAACGATTTATATACGCATACGCATGCGCGGGCACGCCAG
AAGATATTAAGGATATCGGC

Downstream 100 bases:

>100_bases
CGAATGGCATGTTTGTGGATTGGTGCTGCAAGCCAAACCGGCACGTTTTGTGCAGCTTATGGACCACCTGCTCGCTATCC
CGGGAACAGAAATACCCACC

Product: ferredoxin-type protein NapF

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MTDLSRRKLLTGFWQTGKQANIIIRPPWSVSEVDFIAGCTRCHACVSACETGVLIAGSGGFPEIDFQRAECSFCQACVQA
CEAAIFTSVEQTAWQIKASISDRCLPYHQVECRSCQDSCETRAIKFRPRLSGIAQPELDLPACTGCGACVPGCPVQAVTL
TRSEDGR

Sequences:

>Translated_167_residues
MTDLSRRKLLTGFWQTGKQANIIIRPPWSVSEVDFIAGCTRCHACVSACETGVLIAGSGGFPEIDFQRAECSFCQACVQA
CEAAIFTSVEQTAWQIKASISDRCLPYHQVECRSCQDSCETRAIKFRPRLSGIAQPELDLPACTGCGACVPGCPVQAVTL
TRSEDGR
>Mature_166_residues
TDLSRRKLLTGFWQTGKQANIIIRPPWSVSEVDFIAGCTRCHACVSACETGVLIAGSGGFPEIDFQRAECSFCQACVQAC
EAAIFTSVEQTAWQIKASISDRCLPYHQVECRSCQDSCETRAIKFRPRLSGIAQPELDLPACTGCGACVPGCPVQAVTLT
RSEDGR

Specific function: Involved in electron transfer [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788536, Length=157, Percent_Identity=52.8662420382166, Blast_Score=175, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004496 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 18099; Mature: 17968

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
9.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLSRRKLLTGFWQTGKQANIIIRPPWSVSEVDFIAGCTRCHACVSACETGVLIAGSGG
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCC
FPEIDFQRAECSFCQACVQACEAAIFTSVEQTAWQIKASISDRCLPYHQVECRSCQDSCE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
TRAIKFRPRLSGIAQPELDLPACTGCGACVPGCPVQAVTLTRSEDGR
HCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
TDLSRRKLLTGFWQTGKQANIIIRPPWSVSEVDFIAGCTRCHACVSACETGVLIAGSGG
CCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCC
FPEIDFQRAECSFCQACVQACEAAIFTSVEQTAWQIKASISDRCLPYHQVECRSCQDSCE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
TRAIKFRPRLSGIAQPELDLPACTGCGACVPGCPVQAVTLTRSEDGR
HCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]