| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597067
Identifier: 51597067
GI number: 51597067
Start: 3250122
End: 3250829
Strand: Reverse
Name: 51597067
Synonym: YPTB2750
Alternate gene names: NA
Gene position: 3250829-3250122 (Counterclockwise)
Preceding gene: 51597068
Following gene: 51597066
Centisome position: 68.52
GC content: 36.58
Gene sequence:
>708_bases ATGATTAATCGTGAGATTCAATTAGATATGCTCCAACGTGTTGCTGAAGCATTAGGGCCTGATTTACGTAAAAAAATGAC TTTTGTCGGAGGGTGTACGACAGGTCTTTTAGTCACCGATGAGTTTACTCGGGAACAAATACGCCACACCGATGATGTTG ATCTCATTATGCATGTCATGAGCTATACAAGTTATTCAGCACTTCAGCAAGAGCTTCAAGCGCATGGATTTAAAATTGAG GTACCTGATGACGATGGTGCGCCCATTTGTGCAATGAAACTCGGTGATTTGCGAGTCGATTTTATGCCAGATGATGAAAA TATATTAGGTTTTACTAACCGATGGTATAGAAAAGCAATGGAAACAAGCACCTATTTTAATTTAGCACCTGAGCTAAGTA TTAATTTGATAAGTCCTGTTTATTTTATTGCTACTAAATTGGAAGCATACAATGGCCGTGGGAAAGGTGATCCTCTAGAA AGTCGCGATATTGAAGATATTCTCAATTTAGTTGATGGCCGACCAGAGCTTGTAAATGAAATATCTACAGCGGAAAATGA TTTAAAAATATATATTAGTCAACAAATTGAAGTCCTTATTAAATTGAGTGACTTCGATTATGCAATTCAAAGTCATACAT ATGGTGATAAAGCGCGAGAAGATGAGATCTATGAAAGGCTAGAGAAGATAATAGAAATTGGTAAATAA
Upstream 100 bases:
>100_bases TGTATGCTTTGTTAGCGCTCATAGATGGTGTACGTATTGGGCAACCGCGTGAACGTAATTTTGCATCAGATATGTTGATG AAACGGATGGAAGTAACTCG
Downstream 100 bases:
>100_bases TTATGCTAATAACATGGGTTAGCCGCAAGGGTTTGAAAAGATTTAAAAATAATGACGCAGTGGCTTTGTATGAAAATAAT AAAATATTTATTGCGATAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MINREIQLDMLQRVAEALGPDLRKKMTFVGGCTTGLLVTDEFTREQIRHTDDVDLIMHVMSYTSYSALQQELQAHGFKIE VPDDDGAPICAMKLGDLRVDFMPDDENILGFTNRWYRKAMETSTYFNLAPELSINLISPVYFIATKLEAYNGRGKGDPLE SRDIEDILNLVDGRPELVNEISTAENDLKIYISQQIEVLIKLSDFDYAIQSHTYGDKAREDEIYERLEKIIEIGK
Sequences:
>Translated_235_residues MINREIQLDMLQRVAEALGPDLRKKMTFVGGCTTGLLVTDEFTREQIRHTDDVDLIMHVMSYTSYSALQQELQAHGFKIE VPDDDGAPICAMKLGDLRVDFMPDDENILGFTNRWYRKAMETSTYFNLAPELSINLISPVYFIATKLEAYNGRGKGDPLE SRDIEDILNLVDGRPELVNEISTAENDLKIYISQQIEVLIKLSDFDYAIQSHTYGDKAREDEIYERLEKIIEIGK >Mature_235_residues MINREIQLDMLQRVAEALGPDLRKKMTFVGGCTTGLLVTDEFTREQIRHTDDVDLIMHVMSYTSYSALQQELQAHGFKIE VPDDDGAPICAMKLGDLRVDFMPDDENILGFTNRWYRKAMETSTYFNLAPELSINLISPVYFIATKLEAYNGRGKGDPLE SRDIEDILNLVDGRPELVNEISTAENDLKIYISQQIEVLIKLSDFDYAIQSHTYGDKAREDEIYERLEKIIEIGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26878; Mature: 26878
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINREIQLDMLQRVAEALGPDLRKKMTFVGGCTTGLLVTDEFTREQIRHTDDVDLIMHVM CCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCHHHHHHHHH SYTSYSALQQELQAHGFKIEVPDDDGAPICAMKLGDLRVDFMPDDENILGFTNRWYRKAM HHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCEEEEEECCCCCEECHHHHHHHHHH ETSTYFNLAPELSINLISPVYFIATKLEAYNGRGKGDPLESRDIEDILNLVDGRPELVNE HHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHH ISTAENDLKIYISQQIEVLIKLSDFDYAIQSHTYGDKAREDEIYERLEKIIEIGK HHCCCCCEEEEEEEEEEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MINREIQLDMLQRVAEALGPDLRKKMTFVGGCTTGLLVTDEFTREQIRHTDDVDLIMHVM CCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCHHHHHHHHH SYTSYSALQQELQAHGFKIEVPDDDGAPICAMKLGDLRVDFMPDDENILGFTNRWYRKAM HHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCEEEEEECCCCCEECHHHHHHHHHH ETSTYFNLAPELSINLISPVYFIATKLEAYNGRGKGDPLESRDIEDILNLVDGRPELVNE HHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHH ISTAENDLKIYISQQIEVLIKLSDFDYAIQSHTYGDKAREDEIYERLEKIIEIGK HHCCCCCEEEEEEEEEEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA