| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is cysW
Identifier: 51597051
GI number: 51597051
Start: 3231707
End: 3232582
Strand: Reverse
Name: cysW
Synonym: YPTB2733
Alternate gene names: 51597051
Gene position: 3232582-3231707 (Counterclockwise)
Preceding gene: 51597052
Following gene: 51597050
Centisome position: 68.13
GC content: 52.74
Gene sequence:
>876_bases ATGATGGATGTTTCTGAATTTAACGGTGTTGCCCGCCCACCGATCAATTGGGGCAAATGGACGCTGATTGTCATTGGTGC GGCGTTCTCGTTTTTGCTGCTGGTGATCCCGATGGTGTGGATCTTTATCACCGCGTTTTCTAAAGGCATTGCGGTGGTCG GGCAGAATTTATTAAACCCAGATATGTTGCACGCCATCTGGCTGACGGTATTAGTGGCATTGATAACCGTGCCAGTGAAC CTGGTTTTTGGGGTGGTGCTGGCTTGGCTGGTGACGCGCTTTGTTTTCCCCGGTCGCCAATTGTTGATGACGTTAATTGA TATCCCGTTTGCGGTTTCGCCCGTCGTGGCGGGGCTGATGTATTTGTTGTTCTACGGCTCAAATGGGGTGGTCGGTGGTT GGCTTGATGCCCACGATATCCAGTTGATGTTCTCCTGGCCCGGTATGGTGCTGGTCACCATTTTTGTCACCTGTCCTTTT GTGGTGCGTGAACTGGTACCGGTGATGATGAGCCAAGGCAGTCAGGAAGATGAGGCTGCCGTATTACTCGGCGCTTCAGG TTGGCAGATGTTCCGTCGGGTCACCTTACCCAATATTCGCTGGGCGTTGTTGTATGGCGTGGTGTTAACCAATGCCCGCG CGATTGGTGAATTTGGTGCGGTCTCGGTGGTATCCGGTTCTATCCGTGGCGAGACGTATACCTTGCCACTGCAAGTTGAA TTGCTGCATCAGGATTACAACACCGCCGGGGCATTTACTGCCGCCGCGTTACTGACTCTGATGGCAATAGTGACCCTTTT TCTGAAGAGCGGCCTGCAATGGCGCTTGGCGCGTCAGGTTGTTCGTCTCGAACAGGAGCAAAAGCATGAGCATTGA
Upstream 100 bases:
>100_bases CCAGCGCCATTGCCTCGGTGATTCTGGCCGTGTCACTGGCGCTGTTGTTTAGCATTAACACGTTACAAAGCCGCTTTGGT CGGCGGATAGGTGGGCACTA
Downstream 100 bases:
>100_bases AATTAATAATATCAGTAAGTATTTTGGCCGGACCAAGGTACTGAATGACATTACGCTTGATATTCCTTCAGGCCAAATGG TGGCTCTGCTCGGCCCTTCT
Product: sulfate/thiosulfate transporter permease subunit
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MMDVSEFNGVARPPINWGKWTLIVIGAAFSFLLLVIPMVWIFITAFSKGIAVVGQNLLNPDMLHAIWLTVLVALITVPVN LVFGVVLAWLVTRFVFPGRQLLMTLIDIPFAVSPVVAGLMYLLFYGSNGVVGGWLDAHDIQLMFSWPGMVLVTIFVTCPF VVRELVPVMMSQGSQEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPLQVE LLHQDYNTAGAFTAAALLTLMAIVTLFLKSGLQWRLARQVVRLEQEQKHEH
Sequences:
>Translated_291_residues MMDVSEFNGVARPPINWGKWTLIVIGAAFSFLLLVIPMVWIFITAFSKGIAVVGQNLLNPDMLHAIWLTVLVALITVPVN LVFGVVLAWLVTRFVFPGRQLLMTLIDIPFAVSPVVAGLMYLLFYGSNGVVGGWLDAHDIQLMFSWPGMVLVTIFVTCPF VVRELVPVMMSQGSQEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPLQVE LLHQDYNTAGAFTAAALLTLMAIVTLFLKSGLQWRLARQVVRLEQEQKHEH >Mature_291_residues MMDVSEFNGVARPPINWGKWTLIVIGAAFSFLLLVIPMVWIFITAFSKGIAVVGQNLLNPDMLHAIWLTVLVALITVPVN LVFGVVLAWLVTRFVFPGRQLLMTLIDIPFAVSPVVAGLMYLLFYGSNGVVGGWLDAHDIQLMFSWPGMVLVTIFVTCPF VVRELVPVMMSQGSQEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPLQVE LLHQDYNTAGAFTAAALLTLMAIVTLFLKSGLQWRLARQVVRLEQEQKHEH
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=291, Percent_Identity=78.0068728522337, Blast_Score=465, Evalue=1e-132, Organism=Escherichia coli, GI1788764, Length=223, Percent_Identity=38.5650224215247, Blast_Score=154, Evalue=7e-39, Organism=Escherichia coli, GI1786980, Length=208, Percent_Identity=35.0961538461538, Blast_Score=95, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32141; Mature: 32141
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDVSEFNGVARPPINWGKWTLIVIGAAFSFLLLVIPMVWIFITAFSKGIAVVGQNLLNP CCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DMLHAIWLTVLVALITVPVNLVFGVVLAWLVTRFVFPGRQLLMTLIDIPFAVSPVVAGLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHH YLLFYGSNGVVGGWLDAHDIQLMFSWPGMVLVTIFVTCPFVVRELVPVMMSQGSQEDEAA HHHHHCCCCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE VLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPLQVE EEEECHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCHHHEECCCCCCEEEEEEEEE LLHQDYNTAGAFTAAALLTLMAIVTLFLKSGLQWRLARQVVRLEQEQKHEH EHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMDVSEFNGVARPPINWGKWTLIVIGAAFSFLLLVIPMVWIFITAFSKGIAVVGQNLLNP CCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DMLHAIWLTVLVALITVPVNLVFGVVLAWLVTRFVFPGRQLLMTLIDIPFAVSPVVAGLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHH YLLFYGSNGVVGGWLDAHDIQLMFSWPGMVLVTIFVTCPFVVRELVPVMMSQGSQEDEAA HHHHHCCCCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE VLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPLQVE EEEECHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCHHHEECCCCCCEEEEEEEEE LLHQDYNTAGAFTAAALLTLMAIVTLFLKSGLQWRLARQVVRLEQEQKHEH EHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]