| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596995
Identifier: 51596995
GI number: 51596995
Start: 3163147
End: 3164484
Strand: Direct
Name: 51596995
Synonym: YPTB2676
Alternate gene names: NA
Gene position: 3163147-3164484 (Clockwise)
Preceding gene: 51596994
Following gene: 51596996
Centisome position: 66.67
GC content: 47.91
Gene sequence:
>1338_bases ATGCAGTCTGTACCCTCTATTTTTGTGAGTATTGCAAGTTATCGGGATCCTGAGTTGATCCCCACCTTGCATGACATGAT AAATACCGCAGAGCGCCCTGAAAATCTTAATATTGCGATTTTTTGGCAAAATGATAATGACATTAATACCTTCTTAAATC AGGGAATGCAGTTGATTGAGCGTAAAACTCATCAGGGCTATCCACTGTACCAGTTGGAATACAACCGGGCGCGGGTGTCG GTACTCAGTGTGCATTACTATGAAAGTAGAGGGGCATGCTGGGCCAGGCACATGGCCGAAACCTTGTTCCAGGATGAAGC ATTCTTTTTGCAGATCGATTCTCACTGTCGTTTCATTCCACACTGGGATCACGAAATGATCGCGATGTTGGATAGTCTGC GCGCTGAAAGCCCTAAGCCTATCCTCTCCAGCTACCCTCCTGCGTATGAACCCGGCGAGAATGAGATTCGGAAAGATTAT GTCAGCCGCATGATATTTAATCTCTTTACGCAGGAAGGTATCGTGCAAATGCTATCAACCACCATCACCGAAACGGCCCC CGTGCGTTGTGGTTATCTGGCGGGGGGGTTTATTTTTAGTGACGGTAGTTTTGCCAGAGAGGTGCCCAACGATCCCAATA TTTTCTTTATTGGCGAAGAAATTGCCATGGCAGCGCGTGCCTTTACCCATGGCTATGACATTTACGCCCCACACAAAATT CTGCTCTGGCATTTCTATACCCGCGCGGAGCACAGTAAGGTTTGGTCAGATCACAATAATGAAGCCAAAGAAACGGGTGC AGTAGATATGGCCTGGTGGGAGCGCGATAAAATTGCGAAAGACCGGGTTTGTACCCTGTTAGATGGCGATAAAGATCACC GCGTACTCGCCCCCTATACCTTGGGCACCCAGCGTTCATTGTCGGAATTCGAATACCGTCTGGGCATCAATATTAAAAAC CGGGCGGTGCATCCGGATGCCGCGGGTGAAAAAAAAGTGAGCTTCTTCACTGATCTTCCCACATCCCATGAAGACTGGCT TTCCTCCCTGATTAGCGTAAATAAAAAAACGCTAAAAGTGGAAAAGAAAGAGGTGGACTTCACGCGAGAGGATGTGGAGT GGTGGCACATTGGCGTTTATAACCCGCAAAATGTCGCCGTTATGGTGGAAAAAGTTGACCCGCAGAACCTGAGCAAAACG GTTACCCCCGTTGACGAAACCACCTTTGAGTTGAAGTTGGCCTTTAATACTCAAACCCATCCGAATGCACAAACAATTAG AATATGTCCTTACATGCGAACGCAGGGGTGGGGAGATGTCGTGGAGAAACCCTGGTGA
Upstream 100 bases:
>100_bases GAATAAACCGGCTATTGGTGATTTTTCCGCGATGGCAGAAATTATTCTGCAGATAAAATAACGCCATTCGGCAGCTCGTT AAATTTTACACGGATTATAT
Downstream 100 bases:
>100_bases GCAGCGCAGATATTTTTAAAAAGATTTTAAGTATTGACACCTTATTATCATTCGATGGTGTCATCCCTTCGTTATCCGAG TTTCAGCTAAAGCTGGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIERKTHQGYPLYQLEYNRARVS VLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIPHWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDY VSRMIFNLFTQEGIVQMLSTTITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKI LLWHFYTRAEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRVCTLLDGDKDHRVLAPYTLGTQRSLSEFEYRLGINIKN RAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKVEKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNLSKT VTPVDETTFELKLAFNTQTHPNAQTIRICPYMRTQGWGDVVEKPW
Sequences:
>Translated_445_residues MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIERKTHQGYPLYQLEYNRARVS VLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIPHWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDY VSRMIFNLFTQEGIVQMLSTTITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKI LLWHFYTRAEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRVCTLLDGDKDHRVLAPYTLGTQRSLSEFEYRLGINIKN RAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKVEKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNLSKT VTPVDETTFELKLAFNTQTHPNAQTIRICPYMRTQGWGDVVEKPW >Mature_445_residues MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIERKTHQGYPLYQLEYNRARVS VLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIPHWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDY VSRMIFNLFTQEGIVQMLSTTITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKI LLWHFYTRAEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRVCTLLDGDKDHRVLAPYTLGTQRSLSEFEYRLGINIKN RAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKVEKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNLSKT VTPVDETTFELKLAFNTQTHPNAQTIRICPYMRTQGWGDVVEKPW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51463; Mature: 51463
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIE CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH RKTHQGYPLYQLEYNRARVSVLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIP HHHCCCCCEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCC HWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDYVSRMIFNLFTQEGIVQMLST CCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKI HHHCCCCCEEEEEECCEEECCCCHHHCCCCCCCEEEECHHHHHHHHHHHCCCCEECCCEE LLWHFYTRAEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRVCTLLDGDKDHRVLAPYT EEEEEHHHHHHHHHHCCCCCCHHHCCCEEEEHHCHHHHCHHCEEEEECCCCCCEEEECEE LGTQRSLSEFEYRLGINIKNRAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKV CCCCHHHHHHHEEECCEECCCEECCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHEEE EKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNLSKTVTPVDETTFELKLAFNTQTH EHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCC PNAQTIRICPYMRTQGWGDVVEKPW CCCCEEEECCCCCCCCCCHHHCCCC >Mature Secondary Structure MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIE CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH RKTHQGYPLYQLEYNRARVSVLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIP HHHCCCCCEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCC HWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDYVSRMIFNLFTQEGIVQMLST CCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKI HHHCCCCCEEEEEECCEEECCCCHHHCCCCCCCEEEECHHHHHHHHHHHCCCCEECCCEE LLWHFYTRAEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRVCTLLDGDKDHRVLAPYT EEEEEHHHHHHHHHHCCCCCCHHHCCCEEEEHHCHHHHCHHCEEEEECCCCCCEEEECEE LGTQRSLSEFEYRLGINIKNRAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKV CCCCHHHHHHHEEECCEECCCEECCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHEEE EKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNLSKTVTPVDETTFELKLAFNTQTH EHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCC PNAQTIRICPYMRTQGWGDVVEKPW CCCCEEEECCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA