Click here to switch to the map view.

The map label for this gene is 51596981

Identifier: 51596981

GI number: 51596981

Start: 3144224

End: 3145573

Strand: Reverse

Name: 51596981

Synonym: YPTB2662

Alternate gene names: NA

Gene position: 3145573-3144224 (Counterclockwise)

Preceding gene: 51596982

Following gene: 51596980

Centisome position: 66.3

GC content: 47.85

Gene sequence:

>1350_bases
GTGAGAACTAACAAAGTCGTTTGGAGTGAGGGGCTTTTTCTTCGCCCACAACTTTTTCAACAGCAAGAGCGCTATCTTGA
ATATTACGCCCATAAGCGAGCGGCAACGATAACCCCATTCTTTTGGGGATTTGCGCAATATGAAATTGATAGAGAAGCGC
TCTCGTATGGCAAATTAGTATTGCGATCTGGGAAGGGCGTGTTACCCGACGGTACACCATTTGATATTCCCGGCCATGCT
GAATTGCCTGAACCGCTCACTATCACCCCAGAACATCTGGGTAAGTTGATCTATCTGGCGGTCCCACTGCGCCTGGATAA
CAGTGATGAAACCATTTTTGATGAGCACGATATGAGCTCATTGGCACGTTTTTACGCCTATGAAGCTGCGCTCAACGATA
CCAATGCCATTCGGCAAGGGCCGAAGCCGGTACAACTGTCAAGATTACGCCTCAGATTAGTCTCAGAAGGTGAGATGACA
GAATCATGGATTGGGCTGCCATTAACCAAAGTCAGAGCGATTCAGCCTGATGGTAGTGTCTTGCTACACACCGAAGATTA
TATTCCTCCGGTGACGGGTTATGCCGCAAGTTCATTGCTGTCTGAATGGTTAACCCATCTTAATGGTTTGGTTAAAATGC
GCGCAGAGATGTTGGCCAATCGCTTGTCAAACAGTGATGGGAAAGCGAGCGCCAGCGCAGAAATTGTCGATTATTTGCTA
CTGCAAATTTTTAATAAATATGAGCCGATTCTCGATCATTTAAGGCACATTCCTGAATTACCACCTATTACGCTTTATCA
GGAGTTGGCTAAGTTCTCGGGGGAATTATCTACCTTTATCCGGACCAAAACCCGCCGACCCCGTCCGGCACCTGGCTATG
ATCATGCGAAGCTCTATGCGTCTATTCGTCCGTTGGTTGACGAAGTTCATGAACTACTGAACCAGATCTTGGTGCGTGCT
GGGCAGATGATACCGCTGGAGACGAAAGGCAATGGCGTTTGGTCTGCCTCCGTACTGCCTAATGAATTACGCTCGTTTTC
AAATCTGGTCCTTGCCGTTCATGCGCAATTACCGATGGATGTGCTACAGCATCAATTTTCAGTACAAACAAAAATCAGCG
CACCTCAGCAATTGCATGAACTGGTGCGATCGCATTTGCCAGGGTTGGAACTACAGCGTTTGCCGGTACCGCCCAGACAA
ATTCCGTATAGCGCAGGGTACGTTTATTTTGAATTGATAAAAAATGGCCCCTTCTGGGACAAGGTTTCCAATGCTGGTGC
CATTGCCCTGCACGTGGCGGGTGATTTCCCGGCCTTGAAAATGGAGCTCTGGGGGATTAGAGATTCATGA

Upstream 100 bases:

>100_bases
TTGGTATAAAAAAATGTGGCCAGGGCAAGACCAACAAGATCCGATCATGAAGGTACGCGTTGAGCGTCTGTCAATATCAA
TTAAAGAAATGGATTAAGCC

Downstream 100 bases:

>100_bases
GTGACAGCAGTGATTTGAACCTTGGGGGCTCAATGCCTCCTTTTGATCAAAGCAGAAATGTGGATGAGAGTCCGCAGGCA
TTAGGCCGGTTCTTGCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Conserved Protein; Protein ImpJ/VasE; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; T6ss M; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion Protein VasE; Type VI Secretion System Protein; Type VI Secretion System Protein ImpJ; Temperature-Dependent Protein Secretion ImpJ; Type VI Secretion

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MRTNKVVWSEGLFLRPQLFQQQERYLEYYAHKRAATITPFFWGFAQYEIDREALSYGKLVLRSGKGVLPDGTPFDIPGHA
ELPEPLTITPEHLGKLIYLAVPLRLDNSDETIFDEHDMSSLARFYAYEAALNDTNAIRQGPKPVQLSRLRLRLVSEGEMT
ESWIGLPLTKVRAIQPDGSVLLHTEDYIPPVTGYAASSLLSEWLTHLNGLVKMRAEMLANRLSNSDGKASASAEIVDYLL
LQIFNKYEPILDHLRHIPELPPITLYQELAKFSGELSTFIRTKTRRPRPAPGYDHAKLYASIRPLVDEVHELLNQILVRA
GQMIPLETKGNGVWSASVLPNELRSFSNLVLAVHAQLPMDVLQHQFSVQTKISAPQQLHELVRSHLPGLELQRLPVPPRQ
IPYSAGYVYFELIKNGPFWDKVSNAGAIALHVAGDFPALKMELWGIRDS

Sequences:

>Translated_449_residues
MRTNKVVWSEGLFLRPQLFQQQERYLEYYAHKRAATITPFFWGFAQYEIDREALSYGKLVLRSGKGVLPDGTPFDIPGHA
ELPEPLTITPEHLGKLIYLAVPLRLDNSDETIFDEHDMSSLARFYAYEAALNDTNAIRQGPKPVQLSRLRLRLVSEGEMT
ESWIGLPLTKVRAIQPDGSVLLHTEDYIPPVTGYAASSLLSEWLTHLNGLVKMRAEMLANRLSNSDGKASASAEIVDYLL
LQIFNKYEPILDHLRHIPELPPITLYQELAKFSGELSTFIRTKTRRPRPAPGYDHAKLYASIRPLVDEVHELLNQILVRA
GQMIPLETKGNGVWSASVLPNELRSFSNLVLAVHAQLPMDVLQHQFSVQTKISAPQQLHELVRSHLPGLELQRLPVPPRQ
IPYSAGYVYFELIKNGPFWDKVSNAGAIALHVAGDFPALKMELWGIRDS
>Mature_449_residues
MRTNKVVWSEGLFLRPQLFQQQERYLEYYAHKRAATITPFFWGFAQYEIDREALSYGKLVLRSGKGVLPDGTPFDIPGHA
ELPEPLTITPEHLGKLIYLAVPLRLDNSDETIFDEHDMSSLARFYAYEAALNDTNAIRQGPKPVQLSRLRLRLVSEGEMT
ESWIGLPLTKVRAIQPDGSVLLHTEDYIPPVTGYAASSLLSEWLTHLNGLVKMRAEMLANRLSNSDGKASASAEIVDYLL
LQIFNKYEPILDHLRHIPELPPITLYQELAKFSGELSTFIRTKTRRPRPAPGYDHAKLYASIRPLVDEVHELLNQILVRA
GQMIPLETKGNGVWSASVLPNELRSFSNLVLAVHAQLPMDVLQHQFSVQTKISAPQQLHELVRSHLPGLELQRLPVPPRQ
IPYSAGYVYFELIKNGPFWDKVSNAGAIALHVAGDFPALKMELWGIRDS

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50694; Mature: 50694

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTNKVVWSEGLFLRPQLFQQQERYLEYYAHKRAATITPFFWGFAQYEIDREALSYGKLV
CCCCCEEECCCCEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LRSGKGVLPDGTPFDIPGHAELPEPLTITPEHLGKLIYLAVPLRLDNSDETIFDEHDMSS
HCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHCCEEEEEEEEEECCCCCCCCCHHHHHH
LARFYAYEAALNDTNAIRQGPKPVQLSRLRLRLVSEGEMTESWIGLPLTKVRAIQPDGSV
HHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHCCCHHHEEEECCCCCE
LLHTEDYIPPVTGYAASSLLSEWLTHLNGLVKMRAEMLANRLSNSDGKASASAEIVDYLL
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LQIFNKYEPILDHLRHIPELPPITLYQELAKFSGELSTFIRTKTRRPRPAPGYDHAKLYA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
SIRPLVDEVHELLNQILVRAGQMIPLETKGNGVWSASVLPNELRSFSNLVLAVHAQLPMD
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCHHHHHHHHHHEEEEECCCCHH
VLQHQFSVQTKISAPQQLHELVRSHLPGLELQRLPVPPRQIPYSAGYVYFELIKNGPFWD
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCHH
KVSNAGAIALHVAGDFPALKMELWGIRDS
HHCCCCEEEEEECCCCCEEEEEECCCCCC
>Mature Secondary Structure
MRTNKVVWSEGLFLRPQLFQQQERYLEYYAHKRAATITPFFWGFAQYEIDREALSYGKLV
CCCCCEEECCCCEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LRSGKGVLPDGTPFDIPGHAELPEPLTITPEHLGKLIYLAVPLRLDNSDETIFDEHDMSS
HCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHCCEEEEEEEEEECCCCCCCCCHHHHHH
LARFYAYEAALNDTNAIRQGPKPVQLSRLRLRLVSEGEMTESWIGLPLTKVRAIQPDGSV
HHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHCCCHHHEEEECCCCCE
LLHTEDYIPPVTGYAASSLLSEWLTHLNGLVKMRAEMLANRLSNSDGKASASAEIVDYLL
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LQIFNKYEPILDHLRHIPELPPITLYQELAKFSGELSTFIRTKTRRPRPAPGYDHAKLYA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
SIRPLVDEVHELLNQILVRAGQMIPLETKGNGVWSASVLPNELRSFSNLVLAVHAQLPMD
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCHHHHHHHHHHEEEEECCCCHH
VLQHQFSVQTKISAPQQLHELVRSHLPGLELQRLPVPPRQIPYSAGYVYFELIKNGPFWD
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCHH
KVSNAGAIALHVAGDFPALKMELWGIRDS
HHCCCCEEEEEECCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA