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The map label for this gene is yhjH [H]

Identifier: 51596924

GI number: 51596924

Start: 3080585

End: 3081283

Strand: Reverse

Name: yhjH [H]

Synonym: YPTB2605

Alternate gene names: 51596924

Gene position: 3081283-3080585 (Counterclockwise)

Preceding gene: 51596926

Following gene: 51596923

Centisome position: 64.94

GC content: 40.2

Gene sequence:

>699_bases
GTGCGTATGAAGCTAAATATCAAAGTTAATTGTTCTTATGTCTGTGAACCCATACGTAAGCAAGACGGCAGCTTATTGGC
AGTAGAATTGTTAAGCCGATTTTCAGCGACACCCGTTGATTTACCTATTGATGTCGAAAAATTTATTAATGAATTGGACA
TAAACGGAAAAAACGATTTATTCCAAAATCAATTGCAGGCGGTAAAAGCCTACAGTGATTGGTTTATCACGAACAATGTC
CTGCTTTCGATCAATATTGATTTTGATTTAGCGAGTGTGATTGTTACTGATGCGCCCACCCGGCAGTTGCTGGATGAAAT
GCCTTTTTTACGGCTGGAAATCATGGAGACATTCTCCAATTTATCCGATGGTATGAATAATCCCTTGCTACGTGAGTTAG
CCTCACTGTATCCATTATGGTTGGATGATTTAGGCAGCGGAGGCTCAACATTGAACGCGGTGACTGCCAATATCTTTGAA
TATATAAAAATTGATAAGCATTTCTTCTGGCAGCACAACAAACATACCTTCCCGATATTGATCAACAACATTAAAAAATA
TTGTCTTGGGGTCATTGTTGTCGGGGTAGAAAATCAGGGGGAGTCTGAGCAACTCGCAGGCAGTAATATTGATGCTATGC
AGGGGTATCTATTTAACCCGATGACATTGGATGAGCTAGTCTCCCAACCTTTGCGTTAA

Upstream 100 bases:

>100_bases
TAGGGTAATGTTAGGCGTTTAATAAAAGATTAGCGATAGTTTATCAATCCTCCTGCTGAGATCGGATAACGATCTTACTG
TTATCTATATACTTTTCCAG

Downstream 100 bases:

>100_bases
TGTTTTTGGCAAAGCGCGCCTTGATAGGCTGTATCGCGCGGGTATTCGTCTGGGCTGTCAGCGCGATCCTTTTCGACAAA
ATTTTCTCATGGTAGATACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MRMKLNIKVNCSYVCEPIRKQDGSLLAVELLSRFSATPVDLPIDVEKFINELDINGKNDLFQNQLQAVKAYSDWFITNNV
LLSINIDFDLASVIVTDAPTRQLLDEMPFLRLEIMETFSNLSDGMNNPLLRELASLYPLWLDDLGSGGSTLNAVTANIFE
YIKIDKHFFWQHNKHTFPILINNIKKYCLGVIVVGVENQGESEQLAGSNIDAMQGYLFNPMTLDELVSQPLR

Sequences:

>Translated_232_residues
MRMKLNIKVNCSYVCEPIRKQDGSLLAVELLSRFSATPVDLPIDVEKFINELDINGKNDLFQNQLQAVKAYSDWFITNNV
LLSINIDFDLASVIVTDAPTRQLLDEMPFLRLEIMETFSNLSDGMNNPLLRELASLYPLWLDDLGSGGSTLNAVTANIFE
YIKIDKHFFWQHNKHTFPILINNIKKYCLGVIVVGVENQGESEQLAGSNIDAMQGYLFNPMTLDELVSQPLR
>Mature_232_residues
MRMKLNIKVNCSYVCEPIRKQDGSLLAVELLSRFSATPVDLPIDVEKFINELDINGKNDLFQNQLQAVKAYSDWFITNNV
LLSINIDFDLASVIVTDAPTRQLLDEMPFLRLEIMETFSNLSDGMNNPLLRELASLYPLWLDDLGSGGSTLNAVTANIFE
YIKIDKHFFWQHNKHTFPILINNIKKYCLGVIVVGVENQGESEQLAGSNIDAMQGYLFNPMTLDELVSQPLR

Specific function: A bis-(3'-5') cyclic diguanylic acid (c-di-GMP) phosphodiesterase involved in regulating the levels of c-di-GMP that control cell motility (the flagella) and adhesion (adhesive curli fimbriae). The YhjH effect on flagella is controlled via the c-di-GMP-bi

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87082280, Length=233, Percent_Identity=27.0386266094421, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1788000, Length=224, Percent_Identity=27.2321428571429, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: =3.1.4.52 [H]

Molecular weight: Translated: 26290; Mature: 26290

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMKLNIKVNCSYVCEPIRKQDGSLLAVELLSRFSATPVDLPIDVEKFINELDINGKNDL
CEEEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHH
FQNQLQAVKAYSDWFITNNVLLSINIDFDLASVIVTDAPTRQLLDEMPFLRLEIMETFSN
HHHHHHHHHHHHCEEEECCEEEEEEECCEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHH
LSDGMNNPLLRELASLYPLWLDDLGSGGSTLNAVTANIFEYIKIDKHFFWQHNKHTFPIL
HHCCCCCHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHH
INNIKKYCLGVIVVGVENQGESEQLAGSNIDAMQGYLFNPMTLDELVSQPLR
HHHHHHHHHEEEEEEECCCCCCHHHCCCCCHHHHCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MRMKLNIKVNCSYVCEPIRKQDGSLLAVELLSRFSATPVDLPIDVEKFINELDINGKNDL
CEEEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHH
FQNQLQAVKAYSDWFITNNVLLSINIDFDLASVIVTDAPTRQLLDEMPFLRLEIMETFSN
HHHHHHHHHHHHCEEEECCEEEEEEECCEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHH
LSDGMNNPLLRELASLYPLWLDDLGSGGSTLNAVTANIFEYIKIDKHFFWQHNKHTFPIL
HHCCCCCHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHH
INNIKKYCLGVIVVGVENQGESEQLAGSNIDAMQGYLFNPMTLDELVSQPLR
HHHHHHHHHEEEEEEECCCCCCHHHCCCCCHHHHCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]