| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yiaL [H]
Identifier: 51596892
GI number: 51596892
Start: 3044239
End: 3044706
Strand: Direct
Name: yiaL [H]
Synonym: YPTB2573
Alternate gene names: 51596892
Gene position: 3044239-3044706 (Clockwise)
Preceding gene: 51596891
Following gene: 51596908
Centisome position: 64.16
GC content: 49.57
Gene sequence:
>468_bases ATGATACTTGATGAACTAAAAAAAGCGGTGAATAACCCCATCTATCCAGAAGTGATCCGTCGGACACTGGCGGCAATCAG CCAAATGGATTTAGCGGCCCTCCCCGCCGGTGAACTTGAGATTGAAGGGCGCGAAATCTACCTGAACCATATGATCGCCA CGACGAAACCACTGTATGAGCAACGCCCTGAATTACACCGCTATTACATTGATATTCATATTCTCTTAGAAGGCAGTGAA GTGATCGGGGCTTCGCCATCAACCCAAGGCCAACGCCCGACGATGGATTTTGATAGTGAGAAAGATTACGGTTTGTTTGA GGGGATGAGTACCGAGACCTTGCTGACGTTAGCACCGGGTGATATTGCCCTACTGTTCCCTGGGGAATTGCATCGCCCGA TGGGGACATTAACAGACCCGGCCCCCATCCGTAAGCTAGTGGTGAAGGTGGCTAATCATCTTTTATGA
Upstream 100 bases:
>100_bases TGAGCGCGATTCTTAGTGAATAGCGGTGCTGAATGAATAGCGTTTTTTATTGAATGACGGTGCTTAACTGCGCGGACCCC ATAAGGGGATAGGAAAAATA
Downstream 100 bases:
>100_bases TGGTTGGTACAGATGACAGATGACAGATGACAGATGACAGATGACAGATGATGATTGGCGTTGACTTGAACGAATAAACG CTCAACCGAGAGTTCCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MILDELKKAVNNPIYPEVIRRTLAAISQMDLAALPAGELEIEGREIYLNHMIATTKPLYEQRPELHRYYIDIHILLEGSE VIGASPSTQGQRPTMDFDSEKDYGLFEGMSTETLLTLAPGDIALLFPGELHRPMGTLTDPAPIRKLVVKVANHLL
Sequences:
>Translated_155_residues MILDELKKAVNNPIYPEVIRRTLAAISQMDLAALPAGELEIEGREIYLNHMIATTKPLYEQRPELHRYYIDIHILLEGSE VIGASPSTQGQRPTMDFDSEKDYGLFEGMSTETLLTLAPGDIALLFPGELHRPMGTLTDPAPIRKLVVKVANHLL >Mature_155_residues MILDELKKAVNNPIYPEVIRRTLAAISQMDLAALPAGELEIEGREIYLNHMIATTKPLYEQRPELHRYYIDIHILLEGSE VIGASPSTQGQRPTMDFDSEKDYGLFEGMSTETLLTLAPGDIALLFPGELHRPMGTLTDPAPIRKLVVKVANHLL
Specific function: Unknown
COG id: COG2731
COG function: function code G; Beta-galactosidase, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yhcH/yiaL/yjgK family [H]
Homologues:
Organism=Escherichia coli, GI1790001, Length=136, Percent_Identity=33.8235294117647, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI87082398, Length=141, Percent_Identity=34.0425531914894, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1789615, Length=119, Percent_Identity=36.1344537815126, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004375 [H]
Pfam domain/function: PF04074 DUF386 [H]
EC number: NA
Molecular weight: Translated: 17305; Mature: 17305
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILDELKKAVNNPIYPEVIRRTLAAISQMDLAALPAGELEIEGREIYLNHMIATTKPLYE CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEHHHHHCCCHHH QRPELHRYYIDIHILLEGSEVIGASPSTQGQRPTMDFDSEKDYGLFEGMSTETLLTLAPG HCCCCEEEEEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEECCC DIALLFPGELHRPMGTLTDPAPIRKLVVKVANHLL CEEEECCCHHCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MILDELKKAVNNPIYPEVIRRTLAAISQMDLAALPAGELEIEGREIYLNHMIATTKPLYE CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEHHHHHCCCHHH QRPELHRYYIDIHILLEGSEVIGASPSTQGQRPTMDFDSEKDYGLFEGMSTETLLTLAPG HCCCCEEEEEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEECCC DIALLFPGELHRPMGTLTDPAPIRKLVVKVANHLL CEEEECCCHHCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]