| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is 51596836
Identifier: 51596836
GI number: 51596836
Start: 2971075
End: 2972130
Strand: Reverse
Name: 51596836
Synonym: YPTB2515
Alternate gene names: NA
Gene position: 2972130-2971075 (Counterclockwise)
Preceding gene: 51596837
Following gene: 51596835
Centisome position: 62.64
GC content: 51.99
Gene sequence:
>1056_bases ATGATTAGGTATTCCGGCAATCCGTTAATCACACCCCAGGATATTACGCCAAGCCATCCGGGATTTAAGGTTGAATGCGC CTTTAATGCGGGCATTACCAAACTGGGCGATGAGACGATTATGTTGATTCGTATCGCGGAGAGCGTTATCCCTGAAAGTG AGGGTATTACCGTCGTGCCTTTGCTTATGGAAATTTCCGGGCACTGGCAGGTGACCACGCGGGTATTTAAGCACGATGAC CCCGCCTACGATTTTAGTGATCCTCGGCTGATCAGCGATATCGCCGATCCATCGACCGTGTACCTGACATCTCTCTCCCA TCTTCGTGTGGCAAGAAGCCATGATGGCGTTACTTTCGTCGTTGACGATCAACCCTTTATCTTCCCGGCCAACGGTGATG AAGCGTTTGGTTGTGAGGATGCTCGCATTACTCAGATCGACGGCGCTTACTATATTAACTATTCCGCAGTGTCAGCAAAG GGCATTTGCACCGCGCTGGCGGTTACCCAGGATTTCACCGACGTTAAGCGTTTGGGGCTGATTTTCTGCCCTGATAATCG CGATGCGTGTCTGTTCCCGGAAAAAATCAACGGTAAATATATGACGTTGCACCGCCCGGCACCTAAACACTTCGGTAAAC CCGAGATTTGGCTGGCCAGCTCTCTGGATCTGCTGCATTGGGGAGATCATCGGCATTTACTGGGGACATCGCAAGACCCT TGGGATGCCTTGAAACTGGGGGGCGGGGCGCAAATGCTGAAAACAGAAAAAGGGTGGCTGCAAATTTACCATGGGGTAGA TGCGACCCAACGCTATTCTCTCGGTGCGCTGCTGCTAGACCTGGAACAGCCTACTAAAATCCTTGCTAAATCGCCGGTAC CGTTGCTTCAACCGCAGGCTCCTTATGAGCTGCACGGCTTTTTTGGTAACGTCGTCTTTACCTGCGGCGCACTCATTGAG AACGATAGCCTACGGGTCTATTACGGTGCGGCGGATGAATGTATGTGCCTGGCTGAAATGCCGCTGGCTCAACTGTGGCA GCACCTGTCGGTGTAA
Upstream 100 bases:
>100_bases TATTTGATACTCGAAATTATTTGATAATCGAAAGTATTTGATACTCGAAAACGCGGTGAAATGACTCACCACGATATTGC TATTTATATAGAGGACCATA
Downstream 100 bases:
>100_bases TTACGGGATAAAAAAATAAGGCTTCTATGATGAGACATGCCCCACCAGCCAGCGTTGCCCAATTGTTCGCCGATTACCAA AAACGGACGGCTCACAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosidase Related Protein; Glycosylase; Glycosidase-Like Protein; Conserved Domain Protein; Glycosidase-Related; Glycosidase-Related Protein; Cytoplasmic Protein; Glycosylase-Like Protein; Unknwon Conserved Protein
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MIRYSGNPLITPQDITPSHPGFKVECAFNAGITKLGDETIMLIRIAESVIPESEGITVVPLLMEISGHWQVTTRVFKHDD PAYDFSDPRLISDIADPSTVYLTSLSHLRVARSHDGVTFVVDDQPFIFPANGDEAFGCEDARITQIDGAYYINYSAVSAK GICTALAVTQDFTDVKRLGLIFCPDNRDACLFPEKINGKYMTLHRPAPKHFGKPEIWLASSLDLLHWGDHRHLLGTSQDP WDALKLGGGAQMLKTEKGWLQIYHGVDATQRYSLGALLLDLEQPTKILAKSPVPLLQPQAPYELHGFFGNVVFTCGALIE NDSLRVYYGAADECMCLAEMPLAQLWQHLSV
Sequences:
>Translated_351_residues MIRYSGNPLITPQDITPSHPGFKVECAFNAGITKLGDETIMLIRIAESVIPESEGITVVPLLMEISGHWQVTTRVFKHDD PAYDFSDPRLISDIADPSTVYLTSLSHLRVARSHDGVTFVVDDQPFIFPANGDEAFGCEDARITQIDGAYYINYSAVSAK GICTALAVTQDFTDVKRLGLIFCPDNRDACLFPEKINGKYMTLHRPAPKHFGKPEIWLASSLDLLHWGDHRHLLGTSQDP WDALKLGGGAQMLKTEKGWLQIYHGVDATQRYSLGALLLDLEQPTKILAKSPVPLLQPQAPYELHGFFGNVVFTCGALIE NDSLRVYYGAADECMCLAEMPLAQLWQHLSV >Mature_351_residues MIRYSGNPLITPQDITPSHPGFKVECAFNAGITKLGDETIMLIRIAESVIPESEGITVVPLLMEISGHWQVTTRVFKHDD PAYDFSDPRLISDIADPSTVYLTSLSHLRVARSHDGVTFVVDDQPFIFPANGDEAFGCEDARITQIDGAYYINYSAVSAK GICTALAVTQDFTDVKRLGLIFCPDNRDACLFPEKINGKYMTLHRPAPKHFGKPEIWLASSLDLLHWGDHRHLLGTSQDP WDALKLGGGAQMLKTEKGWLQIYHGVDATQRYSLGALLLDLEQPTKILAKSPVPLLQPQAPYELHGFFGNVVFTCGALIE NDSLRVYYGAADECMCLAEMPLAQLWQHLSV
Specific function: Unknown
COG id: COG2152
COG function: function code G; Predicted glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38887; Mature: 38887
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRYSGNPLITPQDITPSHPGFKVECAFNAGITKLGDETIMLIRIAESVIPESEGITVVP CEEECCCEEECCCCCCCCCCCEEEEEEECCCCEECCCCEEEEEEEEHHHCCCCCCCEEEE LLMEISGHWQVTTRVFKHDDPAYDFSDPRLISDIADPSTVYLTSLSHLRVARSHDGVTFV EEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHCCCCCEEEEEEHHHHEEEECCCCEEEE VDDQPFIFPANGDEAFGCEDARITQIDGAYYINYSAVSAKGICTALAVTQDFTDVKRLGL ECCCCEEEECCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCEEEEEECCCHHHHHHCEE IFCPDNRDACLFPEKINGKYMTLHRPAPKHFGKPEIWLASSLDLLHWGDHRHLLGTSQDP EEECCCCCCEECHHCCCCEEEEEECCCHHHCCCCCEEEECCCCEEEECCCCEECCCCCCC WDALKLGGGAQMLKTEKGWLQIYHGVDATQRYSLGALLLDLEQPTKILAKSPVPLLQPQA HHHHEECCCHHEEECCCCEEEEEECCCCCHHEECCEEEEECCCCHHHHHCCCCCCCCCCC PYELHGFFGNVVFTCGALIENDSLRVYYGAADECMCLAEMPLAQLWQHLSV CCEEHHHHHHHHHEEHHEEECCCEEEEECCCCCEEEECCCCHHHHHHHHCC >Mature Secondary Structure MIRYSGNPLITPQDITPSHPGFKVECAFNAGITKLGDETIMLIRIAESVIPESEGITVVP CEEECCCEEECCCCCCCCCCCEEEEEEECCCCEECCCCEEEEEEEEHHHCCCCCCCEEEE LLMEISGHWQVTTRVFKHDDPAYDFSDPRLISDIADPSTVYLTSLSHLRVARSHDGVTFV EEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHCCCCCEEEEEEHHHHEEEECCCCEEEE VDDQPFIFPANGDEAFGCEDARITQIDGAYYINYSAVSAKGICTALAVTQDFTDVKRLGL ECCCCEEEECCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCEEEEEECCCHHHHHHCEE IFCPDNRDACLFPEKINGKYMTLHRPAPKHFGKPEIWLASSLDLLHWGDHRHLLGTSQDP EEECCCCCCEECHHCCCCEEEEEECCCHHHCCCCCEEEECCCCEEEECCCCEECCCCCCC WDALKLGGGAQMLKTEKGWLQIYHGVDATQRYSLGALLLDLEQPTKILAKSPVPLLQPQA HHHHEECCCHHEEECCCCEEEEEECCCCCHHEECCEEEEECCCCHHHHHCCCCCCCCCCC PYELHGFFGNVVFTCGALIENDSLRVYYGAADECMCLAEMPLAQLWQHLSV CCEEHHHHHHHHHEEHHEEECCCEEEEECCCCCEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA