| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596828
Identifier: 51596828
GI number: 51596828
Start: 2957352
End: 2958302
Strand: Reverse
Name: 51596828
Synonym: YPTB2507
Alternate gene names: NA
Gene position: 2958302-2957352 (Counterclockwise)
Preceding gene: 51596829
Following gene: 51596827
Centisome position: 62.35
GC content: 51.21
Gene sequence:
>951_bases ATGAGCTCACTGATTGTTTTACATCAGGTGCGCGTTGAGAACGCCAATGCCATCGCGGGTTTAACTTATGGTTTTCCCGC GATCACCCATTTTCTGGGCTACAGCCACGCGTTATCACGTAAATTGCAATCCAGTCACGGTTTAACACTACGGGGTTGTG CCGTTATCTGCCACCACCAGCAAGTTCATGCCTATTCCTCCGGGCGCGATTATGTCTTCTCGCTAACGCGGAATCCACTC ACTAAAGAGGCCAAAACCGCCGCCTTTAATGAAGAGGGCCGTATGCATATGACGGTGTCTCTGGTGATTGAATGTGATGG CACGATTGCTAATGGGGATGACGGTGCTAACGCGCTGGAAAAACATCTGGCGTCATTGTGCCTGACTCAGCGTTTAGCCG GGGGCACTATCACCAACATTCGCAGAGTTAAAGTCATTAATTATCCTGAAACCGAGGTCGCCACACGCAGATTATTGTGC CACTTACTGCCAGGTTTTGCGTTACTGGATCGCTCTGAATTGTTGGCTGAGCATCTTAACCAGCTAAGACAAACCAATCC ACAGACAGAAATGCTGGATGCCTGGCTCGATTTCTCCGCGCTCAAAATACAGGCTATTCCCCCGCAGAGCGATACGCCGG TGGAAAGCGGTGCTCCTGCACCGTGGGGTTATGTTGGTAAGCCAGCAGCAGGGTATTTGGTCCCCATTGTCACTGGTTAT CGTGCCATTTCACCGCTGTATGCGCCGGGTGAAGTGGATAAAACCCGTGACCCGCATACGCCGTTCCGCTTTGTTGAATC CCTTTATGGCATCGGTGAGTGGCGCGGGTTGCACCGCATAACGGATCTGCGTCAATTGCTCTGGGGCTATCACCAGGAAG GCGATAATTACCTCTGTCGCTGTGCACTCCCGGCATCGGTTGATACCTATCTATTAAATGATGAAGAATAA
Upstream 100 bases:
>100_bases ATGATGAACTGGTCTTTGGCTATGTTGAACAGCGGGAGTGGTCAAGCTTATTTAAGCAGCGGCTACGTGAATTTGAACAA GGTAGCCTGGAGACATGGTC
Downstream 100 bases:
>100_bases TTTTAAAGGATCTAAAAATGGCTAAAGCAACGATTAAAACCGCTTCTGTACTGGCATTTGAACGTAAGTTATCCAATTCC GACGCCATGATGTATGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: CRISPR-Associated Csy2 Family Protein; Csy2 Family CRISPR-Associated Protein; CRISPR-Associated Protein Family Protein
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSSLIVLHQVRVENANAIAGLTYGFPAITHFLGYSHALSRKLQSSHGLTLRGCAVICHHQQVHAYSSGRDYVFSLTRNPL TKEAKTAAFNEEGRMHMTVSLVIECDGTIANGDDGANALEKHLASLCLTQRLAGGTITNIRRVKVINYPETEVATRRLLC HLLPGFALLDRSELLAEHLNQLRQTNPQTEMLDAWLDFSALKIQAIPPQSDTPVESGAPAPWGYVGKPAAGYLVPIVTGY RAISPLYAPGEVDKTRDPHTPFRFVESLYGIGEWRGLHRITDLRQLLWGYHQEGDNYLCRCALPASVDTYLLNDEE
Sequences:
>Translated_316_residues MSSLIVLHQVRVENANAIAGLTYGFPAITHFLGYSHALSRKLQSSHGLTLRGCAVICHHQQVHAYSSGRDYVFSLTRNPL TKEAKTAAFNEEGRMHMTVSLVIECDGTIANGDDGANALEKHLASLCLTQRLAGGTITNIRRVKVINYPETEVATRRLLC HLLPGFALLDRSELLAEHLNQLRQTNPQTEMLDAWLDFSALKIQAIPPQSDTPVESGAPAPWGYVGKPAAGYLVPIVTGY RAISPLYAPGEVDKTRDPHTPFRFVESLYGIGEWRGLHRITDLRQLLWGYHQEGDNYLCRCALPASVDTYLLNDEE >Mature_315_residues SSLIVLHQVRVENANAIAGLTYGFPAITHFLGYSHALSRKLQSSHGLTLRGCAVICHHQQVHAYSSGRDYVFSLTRNPLT KEAKTAAFNEEGRMHMTVSLVIECDGTIANGDDGANALEKHLASLCLTQRLAGGTITNIRRVKVINYPETEVATRRLLCH LLPGFALLDRSELLAEHLNQLRQTNPQTEMLDAWLDFSALKIQAIPPQSDTPVESGAPAPWGYVGKPAAGYLVPIVTGYR AISPLYAPGEVDKTRDPHTPFRFVESLYGIGEWRGLHRITDLRQLLWGYHQEGDNYLCRCALPASVDTYLLNDEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35000; Mature: 34869
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLIVLHQVRVENANAIAGLTYGFPAITHFLGYSHALSRKLQSSHGLTLRGCAVICHHQ CCCEEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECH QVHAYSSGRDYVFSLTRNPLTKEAKTAAFNEEGRMHMTVSLVIECDGTIANGDDGANALE HHHEECCCCCEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEEEEECCEECCCCCCHHHHH KHLASLCLTQRLAGGTITNIRRVKVINYPETEVATRRLLCHLLPGFALLDRSELLAEHLN HHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QLRQTNPQTEMLDAWLDFSALKIQAIPPQSDTPVESGAPAPWGYVGKPAAGYLVPIVTGY HHHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHH RAISPLYAPGEVDKTRDPHTPFRFVESLYGIGEWRGLHRITDLRQLLWGYHQEGDNYLCR HHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE CALPASVDTYLLNDEE EECCCCCCEEEECCCC >Mature Secondary Structure SSLIVLHQVRVENANAIAGLTYGFPAITHFLGYSHALSRKLQSSHGLTLRGCAVICHHQ CCEEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECH QVHAYSSGRDYVFSLTRNPLTKEAKTAAFNEEGRMHMTVSLVIECDGTIANGDDGANALE HHHEECCCCCEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEEEEECCEECCCCCCHHHHH KHLASLCLTQRLAGGTITNIRRVKVINYPETEVATRRLLCHLLPGFALLDRSELLAEHLN HHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QLRQTNPQTEMLDAWLDFSALKIQAIPPQSDTPVESGAPAPWGYVGKPAAGYLVPIVTGY HHHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHH RAISPLYAPGEVDKTRDPHTPFRFVESLYGIGEWRGLHRITDLRQLLWGYHQEGDNYLCR HHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE CALPASVDTYLLNDEE EECCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA