| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yajO [H]
Identifier: 51596825
GI number: 51596825
Start: 2954668
End: 2955687
Strand: Direct
Name: yajO [H]
Synonym: YPTB2504
Alternate gene names: 51596825
Gene position: 2954668-2955687 (Clockwise)
Preceding gene: 51596824
Following gene: 51596832
Centisome position: 62.27
GC content: 47.06
Gene sequence:
>1020_bases ATGGATTACATTAAGTTGGGTCATTGCGGTCTGCAAGTTTCACGGCTTTGCCTTGGCACCATGAATATGGGCAGCAAACA GTGGAAACCCTGGGTTTTTGATAAAGCAGAAAGCACGCCACTGATCAAACACGCTCTAGATTGTGGGATAAATTTTATCG ATTTGGCTGACTTCTATTCCGCTGGAGTAGGTGAAGAAGTGGTTGGGCGCATCGTGAAAAATTTGATGTCGCGTGATGAG TTGGTGCTAACGACTAAAGTAGGTTACCCAATAGGTCATGGCCCGAATAATCAGGGACATTCCCGTAAGCATATAATGGC CAGTATTGATGCCAGCCTGAAACGGTTGGGTACCGATTATATCGATATCTATATGCTGCACTACTTCGATATCAATACTC CAGTTGAAGAAACCTGGTCGGCAATGAACGACATTATTCATTCCGGTAAAGCCCGTTATACCGGCGTTTCCACCATGTTT ACCTGGCAACTGAGTAAAATTTTATGGTGCTGCGAACGTAATGGTTTTGCCAAACCGATCAATATGCAATTACAGCTTAA CTGCGCCTACCGAGAAGAAGAGCGGGAGATGATCCCACAATGTCGCGATCAAGGCTTGGGGATTTCCGCATTTAGCCCAC TGGCGCGCGGCTTACTCAGTTGCGATTTCAGTTCAGTACGCAATAAGACAGATTTTTTCACTCAGGAGATGTATGCCGAT GTCACCTCACTGAATATTGCGCAATCTGTCGAACGGGTTGCAAAAAATCGTGGCATTACTCCCGCTCAGGTTGCTCAAGC CTGGGTGCTTAATCACCCAGGAATCGACTGCATGTTAGTGGGGGCCGATACTATCGAACAGATCAACAGTGCTGTTACCG CTCTGAGAATTTCACTCAACGCCGAAGAAAATTTTGAATTGGAGCGTAACTACACCCCGTGCGATGTTATTAATGATTAC ACCGCAGGCCAGCGGATCGCGCGGGAAGCTCGCCCGCCAAGCGGTATTTTTGCCCCATAA
Upstream 100 bases:
>100_bases CATGCAGCCATGGCAAAAACACCAAAACGTGATCAACTAACACATGCATTGACGCAACTGAGCAACCCCTTCTTTACCCC CAAAGCCTGAGGATTAACTG
Downstream 100 bases:
>100_bases AATAGCTGATATACGTGATTCTTTAACTATTGGCCAGTGCAACATAAAATCAATACGTTAACACTGGCCAAAAAGAATCA AAACCAAGGGATCGTGGCGT
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MDYIKLGHCGLQVSRLCLGTMNMGSKQWKPWVFDKAESTPLIKHALDCGINFIDLADFYSAGVGEEVVGRIVKNLMSRDE LVLTTKVGYPIGHGPNNQGHSRKHIMASIDASLKRLGTDYIDIYMLHYFDINTPVEETWSAMNDIIHSGKARYTGVSTMF TWQLSKILWCCERNGFAKPINMQLQLNCAYREEEREMIPQCRDQGLGISAFSPLARGLLSCDFSSVRNKTDFFTQEMYAD VTSLNIAQSVERVAKNRGITPAQVAQAWVLNHPGIDCMLVGADTIEQINSAVTALRISLNAEENFELERNYTPCDVINDY TAGQRIAREARPPSGIFAP
Sequences:
>Translated_339_residues MDYIKLGHCGLQVSRLCLGTMNMGSKQWKPWVFDKAESTPLIKHALDCGINFIDLADFYSAGVGEEVVGRIVKNLMSRDE LVLTTKVGYPIGHGPNNQGHSRKHIMASIDASLKRLGTDYIDIYMLHYFDINTPVEETWSAMNDIIHSGKARYTGVSTMF TWQLSKILWCCERNGFAKPINMQLQLNCAYREEEREMIPQCRDQGLGISAFSPLARGLLSCDFSSVRNKTDFFTQEMYAD VTSLNIAQSVERVAKNRGITPAQVAQAWVLNHPGIDCMLVGADTIEQINSAVTALRISLNAEENFELERNYTPCDVINDY TAGQRIAREARPPSGIFAP >Mature_339_residues MDYIKLGHCGLQVSRLCLGTMNMGSKQWKPWVFDKAESTPLIKHALDCGINFIDLADFYSAGVGEEVVGRIVKNLMSRDE LVLTTKVGYPIGHGPNNQGHSRKHIMASIDASLKRLGTDYIDIYMLHYFDINTPVEETWSAMNDIIHSGKARYTGVSTMF TWQLSKILWCCERNGFAKPINMQLQLNCAYREEEREMIPQCRDQGLGISAFSPLARGLLSCDFSSVRNKTDFFTQEMYAD VTSLNIAQSVERVAKNRGITPAQVAQAWVLNHPGIDCMLVGADTIEQINSAVTALRISLNAEENFELERNYTPCDVINDY TAGQRIAREARPPSGIFAP
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=317, Percent_Identity=30.9148264984227, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI4504825, Length=315, Percent_Identity=30.7936507936508, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI27436964, Length=309, Percent_Identity=29.126213592233, Blast_Score=124, Evalue=8e-29, Organism=Homo sapiens, GI27436962, Length=309, Percent_Identity=29.126213592233, Blast_Score=124, Evalue=9e-29, Organism=Homo sapiens, GI27436966, Length=309, Percent_Identity=28.8025889967638, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI27436971, Length=310, Percent_Identity=28.7096774193548, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI223718702, Length=303, Percent_Identity=25.4125412541254, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI41152114, Length=208, Percent_Identity=32.2115384615385, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI41327764, Length=302, Percent_Identity=25.8278145695364, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI223718708, Length=170, Percent_Identity=30, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI87081735, Length=323, Percent_Identity=41.4860681114551, Blast_Score=250, Evalue=8e-68, Organism=Escherichia coli, GI1789375, Length=311, Percent_Identity=33.1189710610932, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1788070, Length=320, Percent_Identity=30.3125, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1789199, Length=342, Percent_Identity=26.0233918128655, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI1788081, Length=270, Percent_Identity=30, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI48994888, Length=327, Percent_Identity=25.3822629969419, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787674, Length=303, Percent_Identity=23.1023102310231, Blast_Score=68, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17564128, Length=239, Percent_Identity=25.9414225941423, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6325169, Length=337, Percent_Identity=33.2344213649852, Blast_Score=198, Evalue=8e-52, Organism=Saccharomyces cerevisiae, GI6323998, Length=323, Percent_Identity=25.077399380805, Blast_Score=99, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6319958, Length=297, Percent_Identity=25.2525252525253, Blast_Score=93, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6322615, Length=253, Percent_Identity=27.2727272727273, Blast_Score=91, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6319951, Length=323, Percent_Identity=23.5294117647059, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6321052, Length=152, Percent_Identity=28.2894736842105, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24640980, Length=339, Percent_Identity=27.7286135693215, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI45549126, Length=339, Percent_Identity=27.4336283185841, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24646155, Length=310, Percent_Identity=27.741935483871, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24657054, Length=245, Percent_Identity=27.7551020408163, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24663317, Length=348, Percent_Identity=26.4367816091954, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24646159, Length=230, Percent_Identity=29.1304347826087, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24644950, Length=268, Percent_Identity=23.8805970149254, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI20129731, Length=225, Percent_Identity=27.5555555555556, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37957; Mature: 37957
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYIKLGHCGLQVSRLCLGTMNMGSKQWKPWVFDKAESTPLIKHALDCGINFIDLADFYS CCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHH AGVGEEVVGRIVKNLMSRDELVLTTKVGYPIGHGPNNQGHSRKHIMASIDASLKRLGTDY CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH IDIYMLHYFDINTPVEETWSAMNDIIHSGKARYTGVSTMFTWQLSKILWCCERNGFAKPI HEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCE NMQLQLNCAYREEEREMIPQCRDQGLGISAFSPLARGLLSCDFSSVRNKTDFFTQEMYAD EEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHH VTSLNIAQSVERVAKNRGITPAQVAQAWVLNHPGIDCMLVGADTIEQINSAVTALRISLN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHEEEEEC AEENFELERNYTPCDVINDYTAGQRIAREARPPSGIFAP CCCCCEECCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDYIKLGHCGLQVSRLCLGTMNMGSKQWKPWVFDKAESTPLIKHALDCGINFIDLADFYS CCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHH AGVGEEVVGRIVKNLMSRDELVLTTKVGYPIGHGPNNQGHSRKHIMASIDASLKRLGTDY CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH IDIYMLHYFDINTPVEETWSAMNDIIHSGKARYTGVSTMFTWQLSKILWCCERNGFAKPI HEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCE NMQLQLNCAYREEEREMIPQCRDQGLGISAFSPLARGLLSCDFSSVRNKTDFFTQEMYAD EEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHH VTSLNIAQSVERVAKNRGITPAQVAQAWVLNHPGIDCMLVGADTIEQINSAVTALRISLN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHEEEEEC AEENFELERNYTPCDVINDYTAGQRIAREARPPSGIFAP CCCCCEECCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]