| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yceG
Identifier: 51596789
GI number: 51596789
Start: 2911986
End: 2913011
Strand: Reverse
Name: yceG
Synonym: YPTB2467
Alternate gene names: 51596789
Gene position: 2913011-2911986 (Counterclockwise)
Preceding gene: 51596790
Following gene: 51596788
Centisome position: 61.4
GC content: 46.1
Gene sequence:
>1026_bases ATGAAAAGAAAAAGCACCAAAGCACTGATCCTTTTTGTTGTGATCTGTTTGGGATTACTGCTGTTGGGTTATCAAAAAGT ACAAGATTTTGCGCGTCAGCCCTTGGCGATTAAGCAAGAGACTTACTTTACCTTACCGGTAGGTACCGGGCGGGTTGCTC TAGAGAATTTATTGCTACGTGATCATGTGATTGCTAATACAGGTTTATTTCCCTGGCTACTGCGCATAGAACCCGAACTG GCTAATTTTAAGGCTGGGACATATCGTTTTACGCCGGGTATGACGGTACGTGAGATGCTGGAGTTGTTGGTCAGTGGTAA AGAAGCCCAGTTTACCGTTCGTTTTATTGAAGGTAAGCGCCTGCGTGATTGGCTGGATGAATTACAACAGTCAAAATATA TCAAACATGTGCTGGAAGGGAAAACAGATGCTGAAATTGCGCAGTTACTGGGGTTAAAAGAGAGTGAACACCCCGAAGGC TGGCTCTATCCTGATACCTACTCCTATACCGCAGGTACAACGGATTTAACACTGCTCAAACGTGCCCATCAACGAATGGA GAAAACCGTTGCAGAAATCTGGCAGGGGCGTGATGACGGATTGCCGTATAAGACCCCAAGTGATTTGGTTACTATGGCAT CAATCATTGAAAAAGAAACCGCGGTAAATGAGGAGCGGGATAAGGTGGCTTCTGTCTTCATTAACCGTTTACGTCTTGGT ATGCGCCTACAAACGGATCCAACAGTGATTTATGGTATGGGCGAAAAGTATAACGGCAACATTACTCGTAAAGACTTAGA TACCCCGACACCTTATAATACCTATGTTATTTCCGGTTTGCCGCCAACCCCCATTGCCATGCCAGGGTTGGCATCGCTGA CCGCTGCTGCCCATCCGGCCCAAACGCCCTATCTCTATTTTGTCGCAGACGGCAAGGGCGGGCATACATTCACCACTAAT TTAGCCAGTCATAATCAAGCCGTGCGTGTTTATCGCCAGTCGCTAAAGGATAAAAATGAACAGTAA
Upstream 100 bases:
>100_bases GTCAGCAGTCTGATTAATTGTTATATAATCACGCTTGTTTTTAGAACGCCGCCACATTCAATTTAAAACCGCCACATTCA AATTTAAAAATGGCCACCCG
Downstream 100 bases:
>100_bases ATTTATCGTTATTGAAGGGCTTGAAGGGGCAGGGAAAACCACCGCCCGCGACACCGTGGTCGCGGTGCTGCGGGCCCAAG GGATTAACGATATCGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKRKSTKALILFVVICLGLLLLGYQKVQDFARQPLAIKQETYFTLPVGTGRVALENLLLRDHVIANTGLFPWLLRIEPEL ANFKAGTYRFTPGMTVREMLELLVSGKEAQFTVRFIEGKRLRDWLDELQQSKYIKHVLEGKTDAEIAQLLGLKESEHPEG WLYPDTYSYTAGTTDLTLLKRAHQRMEKTVAEIWQGRDDGLPYKTPSDLVTMASIIEKETAVNEERDKVASVFINRLRLG MRLQTDPTVIYGMGEKYNGNITRKDLDTPTPYNTYVISGLPPTPIAMPGLASLTAAAHPAQTPYLYFVADGKGGHTFTTN LASHNQAVRVYRQSLKDKNEQ
Sequences:
>Translated_341_residues MKRKSTKALILFVVICLGLLLLGYQKVQDFARQPLAIKQETYFTLPVGTGRVALENLLLRDHVIANTGLFPWLLRIEPEL ANFKAGTYRFTPGMTVREMLELLVSGKEAQFTVRFIEGKRLRDWLDELQQSKYIKHVLEGKTDAEIAQLLGLKESEHPEG WLYPDTYSYTAGTTDLTLLKRAHQRMEKTVAEIWQGRDDGLPYKTPSDLVTMASIIEKETAVNEERDKVASVFINRLRLG MRLQTDPTVIYGMGEKYNGNITRKDLDTPTPYNTYVISGLPPTPIAMPGLASLTAAAHPAQTPYLYFVADGKGGHTFTTN LASHNQAVRVYRQSLKDKNEQ >Mature_341_residues MKRKSTKALILFVVICLGLLLLGYQKVQDFARQPLAIKQETYFTLPVGTGRVALENLLLRDHVIANTGLFPWLLRIEPEL ANFKAGTYRFTPGMTVREMLELLVSGKEAQFTVRFIEGKRLRDWLDELQQSKYIKHVLEGKTDAEIAQLLGLKESEHPEG WLYPDTYSYTAGTTDLTLLKRAHQRMEKTVAEIWQGRDDGLPYKTPSDLVTMASIIEKETAVNEERDKVASVFINRLRLG MRLQTDPTVIYGMGEKYNGNITRKDLDTPTPYNTYVISGLPPTPIAMPGLASLTAAAHPAQTPYLYFVADGKGGHTFTTN LASHNQAVRVYRQSLKDKNEQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=320, Percent_Identity=65.3125, Blast_Score=425, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 38478; Mature: 38478
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKSTKALILFVVICLGLLLLGYQKVQDFARQPLAIKQETYFTLPVGTGRVALENLLLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEECCCCHHHHHHHHHH DHVIANTGLFPWLLRIEPELANFKAGTYRFTPGMTVREMLELLVSGKEAQFTVRFIEGKR HHHHHCCCCCCEEEEECCHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCH LRDWLDELQQSKYIKHVLEGKTDAEIAQLLGLKESEHPEGWLYPDTYSYTAGTTDLTLLK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RAHQRMEKTVAEIWQGRDDGLPYKTPSDLVTMASIIEKETAVNEERDKVASVFINRLRLG HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC MRLQTDPTVIYGMGEKYNGNITRKDLDTPTPYNTYVISGLPPTPIAMPGLASLTAAAHPA EEECCCCEEEEECCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCC QTPYLYFVADGKGGHTFTTNLASHNQAVRVYRQSLKDKNEQ CCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRKSTKALILFVVICLGLLLLGYQKVQDFARQPLAIKQETYFTLPVGTGRVALENLLLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEECCCCHHHHHHHHHH DHVIANTGLFPWLLRIEPELANFKAGTYRFTPGMTVREMLELLVSGKEAQFTVRFIEGKR HHHHHCCCCCCEEEEECCHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCH LRDWLDELQQSKYIKHVLEGKTDAEIAQLLGLKESEHPEGWLYPDTYSYTAGTTDLTLLK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RAHQRMEKTVAEIWQGRDDGLPYKTPSDLVTMASIIEKETAVNEERDKVASVFINRLRLG HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC MRLQTDPTVIYGMGEKYNGNITRKDLDTPTPYNTYVISGLPPTPIAMPGLASLTAAAHPA EEECCCCEEEEECCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCC QTPYLYFVADGKGGHTFTTNLASHNQAVRVYRQSLKDKNEQ CCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 1644759; 8631667 [H]