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The map label for this gene is pepT

Identifier: 51596759

GI number: 51596759

Start: 2880758

End: 2881993

Strand: Reverse

Name: pepT

Synonym: YPTB2437

Alternate gene names: 51596759

Gene position: 2881993-2880758 (Counterclockwise)

Preceding gene: 51596760

Following gene: 51596749

Centisome position: 60.74

GC content: 45.23

Gene sequence:

>1236_bases
ATGGACAAATTACTCGACCGATTTTTCAACTATGTTTCTTTTGATACACAAGCAAAAGCCAATGTAAAATCTGTGCCGAG
CACTCAGGGACAGCGCAAGCTTGCTCAGGCGTTGCAACAGGAATTATTGACGTTGGGCTTTTCCCACGTCACCTTGAGCG
ATCATGGTTGCGTGATGGCAACATTGCCGGCAAATGTCTCCTGGCCGGTCCCCACGATTGGCTTTATTGCCCATCTGGAC
ACCTCACCAGATTTTTCAGGTAAAAATGTTAATCCACAGATAGTGGAGAACTACCGTGGTGGTGATATTGCGTTAGGTAT
TGGTGATGAGGTTTTATCTCCTGTTATGTTCCCGGTATTACATCAATTACTTGGACATACCTTGATCACGACTGATGGTA
AAACCCTGTTAGGGGCGGATGATAAAGCGGGTATTGCTGAAATCATTACCGCTATGGTGCGCTTAAAGCACCGTAATGTC
CCCCATGGGGATATTCGTATTGCCTTCACACCGGATGAAGAAGTGGGTAAGGGGGCTCAGTTTTTTAATGTGGCAGAGTT
TGATGCACAGTGGGCTTATACCGTTGATGGTGGCGGCATTGGTGAATTAGAGTTTGAAAATTTCAATGCAGCATCGGTGG
CAATAAAGATCGTCGGCAATAATGTTCATCCAGGCAGTGCTAAGGGCGTCATGGTTAATGCGTTGTCGCTGGCAACCCGT
TACCATCAAGAGTTGCCAGTAGATGAAACCCCTGAGTGTACTGAGGGTTACGACGGTTTCTATCATCTGCAAAGTATTAA
AGGCACGGTTGAACGCGCTGAGATGCACTACATTGTTCGAGATTTCAATCGCGATAGCTTTGAAGCGCGGAAGAAGAATA
TGGTGGATATCGCCAAGCGGGTTGGTAAAGGTTTACATCGTGATTGTTATATCGAAATTGTTATCGATGACAGCTATTAC
AATATGCGTGAGCAGATTATTAAGCACCCGCACATTATCGAATTAGCCCAACAGGCCATGCTTGATTGTGATATTACTCC
GATTATGAAGCCAATTCGTGGTGGTACCGATGGTGCACAACTCTCTTTTAAAGGGTTACCTTGCCCGAATATTTTTACCG
GAGGCTATAATTACCACGGTAAACATGAGTTTATTACGCTGGAAGGGATGGAAAAAGCGGTTGCAGTCATTATGCGAATT
TCTGAGCTGACCGCCAAGCGGGCTAAAGAATCATAA

Upstream 100 bases:

>100_bases
CTTATTATTCTGGCTTAAGTTTATCTAAAGCTGACCTGACGCAATATTTGATCATGATCACTTCCCCATAATGTTATTCA
CTATTATGAGGGTGGGAACC

Downstream 100 bases:

>100_bases
GCTGAACGATAGAGAGAAACGCCCCGAAAAGGGGCGTTTGAGGTTATTGACAAAGTGCCCATAGCGGAGTGAATAGGCAG
CAAGTAAAGATGCTGTAAAC

Product: peptidase T

Products: NA

Alternate protein names: Aminotripeptidase; Tripeptidase; Tripeptide aminopeptidase [H]

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MDKLLDRFFNYVSFDTQAKANVKSVPSTQGQRKLAQALQQELLTLGFSHVTLSDHGCVMATLPANVSWPVPTIGFIAHLD
TSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGHTLITTDGKTLLGADDKAGIAEIITAMVRLKHRNV
PHGDIRIAFTPDEEVGKGAQFFNVAEFDAQWAYTVDGGGIGELEFENFNAASVAIKIVGNNVHPGSAKGVMVNALSLATR
YHQELPVDETPECTEGYDGFYHLQSIKGTVERAEMHYIVRDFNRDSFEARKKNMVDIAKRVGKGLHRDCYIEIVIDDSYY
NMREQIIKHPHIIELAQQAMLDCDITPIMKPIRGGTDGAQLSFKGLPCPNIFTGGYNYHGKHEFITLEGMEKAVAVIMRI
SELTAKRAKES

Sequences:

>Translated_411_residues
MDKLLDRFFNYVSFDTQAKANVKSVPSTQGQRKLAQALQQELLTLGFSHVTLSDHGCVMATLPANVSWPVPTIGFIAHLD
TSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGHTLITTDGKTLLGADDKAGIAEIITAMVRLKHRNV
PHGDIRIAFTPDEEVGKGAQFFNVAEFDAQWAYTVDGGGIGELEFENFNAASVAIKIVGNNVHPGSAKGVMVNALSLATR
YHQELPVDETPECTEGYDGFYHLQSIKGTVERAEMHYIVRDFNRDSFEARKKNMVDIAKRVGKGLHRDCYIEIVIDDSYY
NMREQIIKHPHIIELAQQAMLDCDITPIMKPIRGGTDGAQLSFKGLPCPNIFTGGYNYHGKHEFITLEGMEKAVAVIMRI
SELTAKRAKES
>Mature_411_residues
MDKLLDRFFNYVSFDTQAKANVKSVPSTQGQRKLAQALQQELLTLGFSHVTLSDHGCVMATLPANVSWPVPTIGFIAHLD
TSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGHTLITTDGKTLLGADDKAGIAEIITAMVRLKHRNV
PHGDIRIAFTPDEEVGKGAQFFNVAEFDAQWAYTVDGGGIGELEFENFNAASVAIKIVGNNVHPGSAKGVMVNALSLATR
YHQELPVDETPECTEGYDGFYHLQSIKGTVERAEMHYIVRDFNRDSFEARKKNMVDIAKRVGKGLHRDCYIEIVIDDSYY
NMREQIIKHPHIIELAQQAMLDCDITPIMKPIRGGTDGAQLSFKGLPCPNIFTGGYNYHGKHEFITLEGMEKAVAVIMRI
SELTAKRAKES

Specific function: Cleaves the N-terminal amino acid of tripeptides [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20B family [H]

Homologues:

Organism=Escherichia coli, GI1787372, Length=407, Percent_Identity=76.9041769041769, Blast_Score=676, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR002933
- InterPro:   IPR011650
- InterPro:   IPR010161 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.4.11.4 [H]

Molecular weight: Translated: 45387; Mature: 45387

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS00758 ARGE_DAPE_CPG2_1 ; PS00759 ARGE_DAPE_CPG2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLLDRFFNYVSFDTQAKANVKSVPSTQGQRKLAQALQQELLTLGFSHVTLSDHGCVMA
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCEEEE
TLPANVSWPVPTIGFIAHLDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVL
ECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHH
HQLLGHTLITTDGKTLLGADDKAGIAEIITAMVRLKHRNVPHGDIRIAFTPDEEVGKGAQ
HHHHCCEEEECCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHCCCCC
FFNVAEFDAQWAYTVDGGGIGELEFENFNAASVAIKIVGNNVHPGSAKGVMVNALSLATR
EEEEEECCCEEEEEECCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHH
YHQELPVDETPECTEGYDGFYHLQSIKGTVERAEMHYIVRDFNRDSFEARKKNMVDIAKR
HHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VGKGLHRDCYIEIVIDDSYYNMREQIIKHPHIIELAQQAMLDCDITPIMKPIRGGTDGAQ
HCCCCCCCEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCE
LSFKGLPCPNIFTGGYNYHGKHEFITLEGMEKAVAVIMRISELTAKRAKES
EEECCCCCCCCEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKLLDRFFNYVSFDTQAKANVKSVPSTQGQRKLAQALQQELLTLGFSHVTLSDHGCVMA
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCEEEE
TLPANVSWPVPTIGFIAHLDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVL
ECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHH
HQLLGHTLITTDGKTLLGADDKAGIAEIITAMVRLKHRNVPHGDIRIAFTPDEEVGKGAQ
HHHHCCEEEECCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHCCCCC
FFNVAEFDAQWAYTVDGGGIGELEFENFNAASVAIKIVGNNVHPGSAKGVMVNALSLATR
EEEEEECCCEEEEEECCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHH
YHQELPVDETPECTEGYDGFYHLQSIKGTVERAEMHYIVRDFNRDSFEARKKNMVDIAKR
HHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VGKGLHRDCYIEIVIDDSYYNMREQIIKHPHIIELAQQAMLDCDITPIMKPIRGGTDGAQ
HCCCCCCCEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCE
LSFKGLPCPNIFTGGYNYHGKHEFITLEGMEKAVAVIMRISELTAKRAKES
EEECCCCCCCCEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA