| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yebT [H]
Identifier: 51596704
GI number: 51596704
Start: 2806246
End: 2808897
Strand: Direct
Name: yebT [H]
Synonym: YPTB2380
Alternate gene names: 51596704
Gene position: 2806246-2808897 (Clockwise)
Preceding gene: 51596703
Following gene: 51596705
Centisome position: 59.15
GC content: 49.74
Gene sequence:
>2652_bases ATGCAACAGGAAACACCGAGTACACCGACTGAGGCTCATGTAAAACATAAACGCCGGTTCTCCCCCTTCTGGCTACTGCC TTTTATTGCGCTACTGATCACGGGCTGGCTGATTTATAACAATTGGCAAGAACGTGGGACGGAAATCACTATTGATTTTC AGTCAACTGCTGGAATTGTTGCTGGCCGCACACCCATCCGCTATCAAGGCGTGGATGTAGGTTTGGTTCAATCCATCAGA TTGGATGATAACCTGCGTAACATTAAAGTGACCGCCAGTATCAAAAATGATATGAAGGATTCACTACGTGAAGGTACCCA GTTCTGGCTAGTGACCCCCAAAGCCTCTCTGGCCGGTGTTTCTGGATTGGATGCGCTGGTGGGCGGTAATTATATCGGCA TGATGCCTGGTGAGGGTAAGCCGCAAAGCCATTTCACTGCATTGGATACTCAGCCTAAATTCCGCCTGAATACAGGCGAA TTAATGATTCATCTCTCTGCCCCTGACCTCGGCTCACTCAATAACGGCTCGTTGGTTTACTATCGTAAAATTCCGGTTGG CAAAGTGTATGACTACACGATCGCCCCTGATAATAACGGGGTTATTATTGATGTCCTGATTGATAGACGATTTGCCAATT TGGTGAAAAAGGACTCTCGATTCTGGAATGTTTCTGGTTTTAAAGCTGATTTCAGCCTAAGCGGTGCCTCGGTGCAAATG GAGAGTCTGGCGGCGCTGGTCAATGGCGCAATTGCTTTCGATTCCCCACAAAATAGCCAAGATGCCGCGCCAGATCAGCC TTTCCAACTTTATTCTGATTTAGCGCACAGTCAGCGCGGGGTGGCCATCACCCTGGATTTACCAGGGGGAAGTCACTTGA GTGAGGGCCGTACCCCCCTGATTTATCAGGGGTTGCAAGTTGGTACTTTGACTAAAATGACGCTTCAACCAGACCAAAAA GTGACGGGAGAGCTAACCATTGATCCCTCCGTAGTGAATTTGATGCGTAGTGGCACACGCATTGAAATGAATAGCCCGCG GATCAGCCTCAGTAATGCCAACGTAAGTGAACTGCTTACTGGTAATACATTAGAGCTGATCCCAGGCGACGGTGAGCCAC AACAACATTTTACCGTACTGCCCAGCAGTAAAAGCCTGTTACAACAACCCAATGTCCTTGAATTGCAACTCACCGCGCCA CAAAGCTATGGCATTGATGTCGGCCAGCCTATTTCACTACGTGGTATCAAGATTGGTCAGGTGTTAACCCGCGAACTGTC AGCCGATGGCGTCACCTTTACGGCCGCGATAGAAGCGAAATATCGCCATCTGGTGCACAAGGACAGCAAATTTGTGGCAA ACAGCCGCCTTGATGTCAACGTGGGGATTGATGGCGTTAACGTGCAAGGCGCCAGCGCACAAGAATGGATTGATGGCGGT ATTCTGCTTTTATCAGGTAGCAAAGGCGAGGTATCAGGTAGCAAGGGCGAGGCACTGAAACAATACCCCCTTTACAGTAG CGTGGCAAAAGCAACTGATGGGATTTTAGGCAGTTCACCGGCAACGACCCTAACGCTAACGGCCAGCAGTTTGCCTGATA TACAGGCCGGTTCTGTGGTGTTGTACCGTAAGTTTCAGGTGGGTGAAATTACTCACGTACGCCCTAAAGCCAACGCCTTC GAAGTGGATGTTTACATTCAACCCGAGTATCGCAATCTACTAACCGAAAAGAGTATTTTTTGGTCAGAAGGGGGCGCAAA AGTACAACTGAGTGGGAGTGGCCTTACTGTACAAGCCTCACCGCTTAACCGGGCCTTAAAAGGGGCCATCAGCTTCGATA ATCTAGAAGGCGTCACTCTGGATAAAGGGGCCAAGCGGACATTGTATAGTAATGAAACGGCCGCACGGGCCGTGGGTAGC CAGATTATATTGCGTACATTTGATGCCAGTAAACTGTCGGCGGGTATGCCAATCCGCTATTTGGGGATCGATATTGGCCA AGTTGAGTCGCTGAAGCTGGCACCCGAGCGTAATGAAGTCTTAGCCAAAGCCGTACTTTACCCAGAATATGTGCAAAACT TTACCCGCGCGGGTACCCGTTTCTCCATCGTCTCACCGGAGATCTCGGCTGCAGGGGTCAATAATCTGGAGACCTTGTTC CAGCCCTACATTAATGTAGAGCCCGGTAAAGGGGGGCCCTTGCGCAATTTTGAGTTGCAGACCGCCACCATTACTGACTC CCGTTATCTTGATGGCCTGAGCATCATACTGGATACCGCTGAAGCGGGTTCGTTGCAAGTTGGGACGCCAGTCCTGTTCC GTGGGCTTGAAGTTGGCACTGTCACCGGTTTTAATCTGGGTGCAATGTCCGATCGAGTGCAGGTATCACTGCGGATAAGC CAAAAGTTTCAGCATCTAGTAAGACAAAACACGGTATTTTGGCTAGCATCAGGTTATAACTTTGAGTTCGGTCTGATAGG TGGTGTGGTGAAAAGCGGGACCTTCCAGCAGTTTATCCGTGGTGGTATCGCTTTCGCTACGCCACCAACCATACCACTGG CACCGAGAGCCAATGTCAATCAGCACTTTTTGCTCGCCCCCGAAGAGCCTAAAGATTGGCGAAAATGGGGAACAGCCATT CCACGTTCTTAA
Upstream 100 bases:
>100_bases TCCTTCACTATGGGGCCAGCAGCCTTCTATTTTGGGTCTGCGGTTATTTTGACTATTCTTGCTGTTGAGTGGCTAGATAG CCGATTGATTTGGGATGCAT
Downstream 100 bases:
>100_bases ATAATTCATCAGGGTGGTTCGCCATAAGCTGCCCTGATGATTACCCGTGCTCATGCCCTGCACAGCAATCGCCATTCTTA TAAACCCTTTTTCTAAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 883; Mature: 883
Protein sequence:
>883_residues MQQETPSTPTEAHVKHKRRFSPFWLLPFIALLITGWLIYNNWQERGTEITIDFQSTAGIVAGRTPIRYQGVDVGLVQSIR LDDNLRNIKVTASIKNDMKDSLREGTQFWLVTPKASLAGVSGLDALVGGNYIGMMPGEGKPQSHFTALDTQPKFRLNTGE LMIHLSAPDLGSLNNGSLVYYRKIPVGKVYDYTIAPDNNGVIIDVLIDRRFANLVKKDSRFWNVSGFKADFSLSGASVQM ESLAALVNGAIAFDSPQNSQDAAPDQPFQLYSDLAHSQRGVAITLDLPGGSHLSEGRTPLIYQGLQVGTLTKMTLQPDQK VTGELTIDPSVVNLMRSGTRIEMNSPRISLSNANVSELLTGNTLELIPGDGEPQQHFTVLPSSKSLLQQPNVLELQLTAP QSYGIDVGQPISLRGIKIGQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGIDGVNVQGASAQEWIDGG ILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTLTLTASSLPDIQAGSVVLYRKFQVGEITHVRPKANAF EVDVYIQPEYRNLLTEKSIFWSEGGAKVQLSGSGLTVQASPLNRALKGAISFDNLEGVTLDKGAKRTLYSNETAARAVGS QIILRTFDASKLSAGMPIRYLGIDIGQVESLKLAPERNEVLAKAVLYPEYVQNFTRAGTRFSIVSPEISAAGVNNLETLF QPYINVEPGKGGPLRNFELQTATITDSRYLDGLSIILDTAEAGSLQVGTPVLFRGLEVGTVTGFNLGAMSDRVQVSLRIS QKFQHLVRQNTVFWLASGYNFEFGLIGGVVKSGTFQQFIRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRKWGTAI PRS
Sequences:
>Translated_883_residues MQQETPSTPTEAHVKHKRRFSPFWLLPFIALLITGWLIYNNWQERGTEITIDFQSTAGIVAGRTPIRYQGVDVGLVQSIR LDDNLRNIKVTASIKNDMKDSLREGTQFWLVTPKASLAGVSGLDALVGGNYIGMMPGEGKPQSHFTALDTQPKFRLNTGE LMIHLSAPDLGSLNNGSLVYYRKIPVGKVYDYTIAPDNNGVIIDVLIDRRFANLVKKDSRFWNVSGFKADFSLSGASVQM ESLAALVNGAIAFDSPQNSQDAAPDQPFQLYSDLAHSQRGVAITLDLPGGSHLSEGRTPLIYQGLQVGTLTKMTLQPDQK VTGELTIDPSVVNLMRSGTRIEMNSPRISLSNANVSELLTGNTLELIPGDGEPQQHFTVLPSSKSLLQQPNVLELQLTAP QSYGIDVGQPISLRGIKIGQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGIDGVNVQGASAQEWIDGG ILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTLTLTASSLPDIQAGSVVLYRKFQVGEITHVRPKANAF EVDVYIQPEYRNLLTEKSIFWSEGGAKVQLSGSGLTVQASPLNRALKGAISFDNLEGVTLDKGAKRTLYSNETAARAVGS QIILRTFDASKLSAGMPIRYLGIDIGQVESLKLAPERNEVLAKAVLYPEYVQNFTRAGTRFSIVSPEISAAGVNNLETLF QPYINVEPGKGGPLRNFELQTATITDSRYLDGLSIILDTAEAGSLQVGTPVLFRGLEVGTVTGFNLGAMSDRVQVSLRIS QKFQHLVRQNTVFWLASGYNFEFGLIGGVVKSGTFQQFIRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRKWGTAI PRS >Mature_883_residues MQQETPSTPTEAHVKHKRRFSPFWLLPFIALLITGWLIYNNWQERGTEITIDFQSTAGIVAGRTPIRYQGVDVGLVQSIR LDDNLRNIKVTASIKNDMKDSLREGTQFWLVTPKASLAGVSGLDALVGGNYIGMMPGEGKPQSHFTALDTQPKFRLNTGE LMIHLSAPDLGSLNNGSLVYYRKIPVGKVYDYTIAPDNNGVIIDVLIDRRFANLVKKDSRFWNVSGFKADFSLSGASVQM ESLAALVNGAIAFDSPQNSQDAAPDQPFQLYSDLAHSQRGVAITLDLPGGSHLSEGRTPLIYQGLQVGTLTKMTLQPDQK VTGELTIDPSVVNLMRSGTRIEMNSPRISLSNANVSELLTGNTLELIPGDGEPQQHFTVLPSSKSLLQQPNVLELQLTAP QSYGIDVGQPISLRGIKIGQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGIDGVNVQGASAQEWIDGG ILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTLTLTASSLPDIQAGSVVLYRKFQVGEITHVRPKANAF EVDVYIQPEYRNLLTEKSIFWSEGGAKVQLSGSGLTVQASPLNRALKGAISFDNLEGVTLDKGAKRTLYSNETAARAVGS QIILRTFDASKLSAGMPIRYLGIDIGQVESLKLAPERNEVLAKAVLYPEYVQNFTRAGTRFSIVSPEISAAGVNNLETLF QPYINVEPGKGGPLRNFELQTATITDSRYLDGLSIILDTAEAGSLQVGTPVLFRGLEVGTVTGFNLGAMSDRVQVSLRIS QKFQHLVRQNTVFWLASGYNFEFGLIGGVVKSGTFQQFIRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRKWGTAI PRS
Specific function: Unknown
COG id: COG3008
COG function: function code R; Paraquat-inducible protein B
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqiB family [H]
Homologues:
Organism=Escherichia coli, GI87081984, Length=884, Percent_Identity=67.8733031674208, Blast_Score=1262, Evalue=0.0, Organism=Escherichia coli, GI1787184, Length=316, Percent_Identity=29.1139240506329, Blast_Score=155, Evalue=9e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003399 [H]
Pfam domain/function: PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 95771; Mature: 95771
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQETPSTPTEAHVKHKRRFSPFWLLPFIALLITGWLIYNNWQERGTEITIDFQSTAGIV CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCHHHCCCEEEEEECCCCCEE AGRTPIRYQGVDVGLVQSIRLDDNLRNIKVTASIKNDMKDSLREGTQFWLVTPKASLAGV ECCCCEEEECCCEEEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCEEEEECCCHHHCCC SGLDALVGGNYIGMMPGEGKPQSHFTALDTQPKFRLNTGELMIHLSAPDLGSLNNGSLVY CCCHHHHCCCEEEECCCCCCCCCCEEEECCCCCEEEECCEEEEEECCCCCCCCCCCCEEE YRKIPVGKVYDYTIAPDNNGVIIDVLIDRRFANLVKKDSRFWNVSGFKADFSLSGASVQM EEECCCCCEEEEEECCCCCCEEEEEEECHHHHHHHHCCCCEEECCCEEEEEEECCCCEEH ESLAALVNGAIAFDSPQNSQDAAPDQPFQLYSDLAHSQRGVAITLDLPGGSHLSEGRTPL HHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCE IYQGLQVGTLTKMTLQPDQKVTGELTIDPSVVNLMRSGTRIEMNSPRISLSNANVSELLT EECCEEECEEEEEEECCCCCCCEEEEECHHHHHHHHCCCEEEECCCEEEECCCCHHHHHC GNTLELIPGDGEPQQHFTVLPSSKSLLQQPNVLELQLTAPQSYGIDVGQPISLRGIKIGQ CCEEEEECCCCCCCCEEEECCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCEECCEEHHH VLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGIDGVNVQGASAQEWIDGG HHHHHHCCCCEEEEEEEHHHHHHHHCCCCCEEECCEEEEEECCCCEEECCCCHHHHCCCC ILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTLTLTASSLPDIQAGSVV EEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEE LYRKFQVGEITHVRPKANAFEVDVYIQPEYRNLLTEKSIFWSEGGAKVQLSGSGLTVQAS EEEEEECCCEEEECCCCCEEEEEEEECCHHHHHHHHCCEEECCCCCEEEECCCCEEEECC PLNRALKGAISFDNLEGVTLDKGAKRTLYSNETAARAVGSQIILRTFDASKLSAGMPIRY CHHHHHHCCEEECCCCCEEECCCCCCEEECCCHHHHHHCCEEEEEEECCHHHCCCCCEEE LGIDIGQVESLKLAPERNEVLAKAVLYPEYVQNFTRAGTRFSIVSPEISAAGVNNLETLF EECCCCCCCEEEECCCHHHHHHHHHHCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHH QPYINVEPGKGGPLRNFELQTATITDSRYLDGLSIILDTAEAGSLQVGTPVLFRGLEVGT CCCEEECCCCCCCCCCEEEEEEEECCCHHHCCEEEEEECCCCCCEEECCHHHHCCEEEEE VTGFNLGAMSDRVQVSLRISQKFQHLVRQNTVFWLASGYNFEFGLIGGVVKSGTFQQFIR EECCCCCCCCCEEEEEEEHHHHHHHHHHCCEEEEEECCCCEEEEEHHHHHCCCCHHHHHH GGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRKWGTAIPRS CCEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCC >Mature Secondary Structure MQQETPSTPTEAHVKHKRRFSPFWLLPFIALLITGWLIYNNWQERGTEITIDFQSTAGIV CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCHHHCCCEEEEEECCCCCEE AGRTPIRYQGVDVGLVQSIRLDDNLRNIKVTASIKNDMKDSLREGTQFWLVTPKASLAGV ECCCCEEEECCCEEEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCEEEEECCCHHHCCC SGLDALVGGNYIGMMPGEGKPQSHFTALDTQPKFRLNTGELMIHLSAPDLGSLNNGSLVY CCCHHHHCCCEEEECCCCCCCCCCEEEECCCCCEEEECCEEEEEECCCCCCCCCCCCEEE YRKIPVGKVYDYTIAPDNNGVIIDVLIDRRFANLVKKDSRFWNVSGFKADFSLSGASVQM EEECCCCCEEEEEECCCCCCEEEEEEECHHHHHHHHCCCCEEECCCEEEEEEECCCCEEH ESLAALVNGAIAFDSPQNSQDAAPDQPFQLYSDLAHSQRGVAITLDLPGGSHLSEGRTPL HHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCE IYQGLQVGTLTKMTLQPDQKVTGELTIDPSVVNLMRSGTRIEMNSPRISLSNANVSELLT EECCEEECEEEEEEECCCCCCCEEEEECHHHHHHHHCCCEEEECCCEEEECCCCHHHHHC GNTLELIPGDGEPQQHFTVLPSSKSLLQQPNVLELQLTAPQSYGIDVGQPISLRGIKIGQ CCEEEEECCCCCCCCEEEECCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCEECCEEHHH VLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGIDGVNVQGASAQEWIDGG HHHHHHCCCCEEEEEEEHHHHHHHHCCCCCEEECCEEEEEECCCCEEECCCCHHHHCCCC ILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTLTLTASSLPDIQAGSVV EEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEE LYRKFQVGEITHVRPKANAFEVDVYIQPEYRNLLTEKSIFWSEGGAKVQLSGSGLTVQAS EEEEEECCCEEEECCCCCEEEEEEEECCHHHHHHHHCCEEECCCCCEEEECCCCEEEECC PLNRALKGAISFDNLEGVTLDKGAKRTLYSNETAARAVGSQIILRTFDASKLSAGMPIRY CHHHHHHCCEEECCCCCEEECCCCCCEEECCCHHHHHHCCEEEEEEECCHHHCCCCCEEE LGIDIGQVESLKLAPERNEVLAKAVLYPEYVQNFTRAGTRFSIVSPEISAAGVNNLETLF EECCCCCCCEEEECCCHHHHHHHHHHCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHH QPYINVEPGKGGPLRNFELQTATITDSRYLDGLSIILDTAEAGSLQVGTPVLFRGLEVGT CCCEEECCCCCCCCCCEEEEEEEECCCHHHCCEEEEEECCCCCCEEECCHHHHCCEEEEE VTGFNLGAMSDRVQVSLRISQKFQHLVRQNTVFWLASGYNFEFGLIGGVVKSGTFQQFIR EECCCCCCCCCEEEEEEEHHHHHHHHHHCCEEEEEECCCCEEEEEHHHHHCCCCHHHHHH GGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRKWGTAIPRS CCEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]