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The map label for this gene is ydhO [H]

Identifier: 51596622

GI number: 51596622

Start: 2711042

End: 2711908

Strand: Direct

Name: ydhO [H]

Synonym: YPTB2298

Alternate gene names: 51596622

Gene position: 2711042-2711908 (Clockwise)

Preceding gene: 51596620

Following gene: 51596623

Centisome position: 57.14

GC content: 44.98

Gene sequence:

>867_bases
GTGGGTAGCGTTATTATGCGTTTAATGCTTACGCTGTTTGTGCTGCTGTTTACCCAGCTATTTTTAAATTTGGCGCATGC
GTCACCGCAAGCTCATTCGTCTGTTGAACAGAAAAAGGGGCATGTTAGCCAGGCCAGTCCTGATGATCGTAAAAAGCGCA
AAGCAGATAAAAGTACAAAGAGAAGTAAAATCGCTACCACGAAAGGCCCTGTCAGTAAGAAGACAACTGAGCCTCGTAAA
ACAGGCAACAATAAGACAAGTACCAACAAAGTCGTTCGCAATAAAATAAACAGCAGTCGGACAACTGAAAGTAAAACTGC
AGCTAATAAGAAAAGGACATCAAGCATAAGAACAGCCAAAACACCGTATGGGCGGCAGCGAAATAAAGCGCAAGGTAAGG
CCAGTACCGAGTTGGCAGCAAACAACAAACTTAAGCTCAGCCCAGCACACAAGAAGCGTTACCAAAAAGCGAAACAGACC
GCGATGAGCAAACTGATGAAGCAAGTTGGTAAGCCTTACCGCTGGGGTGGCAGTTCCCCTAACACCGGTTTCGATTGCAG
CGGGCTTATTTATTACGCTTACAAAGATGTCGTCAAAATAAAAATGCCACGAACCGCTAATGAAATGTATCACTTACGTG
ATGCCGCTCCCGTTAAGCGCACGGAATTGGAAAGTGGTGATTTAGTCTTCTTCAAGATCGCCAATCGCGGTGTCGCAGAC
CATGTTGGTGTCTATTTAGGTAATGGTAAATTTATTCAGTCTCCTCGTACCGGTGAGGAAATTCGTATCAGTATGTTGAA
TAATGATTACTGGCAAGATCACTATGTCGGCGCACGCCGCGTCGTCACACCTAAAACTATTCGTTAG

Upstream 100 bases:

>100_bases
TGTTTTCTCACAATATCGACTAAAATCCTATAGCTCTCTGCTTTGTTATATCGTGAGTTTCGGCAATACTGTCACTCTTC
ATATTCGTTTCAGGGCCAAG

Downstream 100 bases:

>100_bases
TAAAAACTATTTGTTATTAAAAGCTTTGTTATCAAAAATATTTGTTAGTAAAAATATTCGCGAGTAAAAGCATCTGCCAG
TAAAACCCTCTAGCCCTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MGSVIMRLMLTLFVLLFTQLFLNLAHASPQAHSSVEQKKGHVSQASPDDRKKRKADKSTKRSKIATTKGPVSKKTTEPRK
TGNNKTSTNKVVRNKINSSRTTESKTAANKKRTSSIRTAKTPYGRQRNKAQGKASTELAANNKLKLSPAHKKRYQKAKQT
AMSKLMKQVGKPYRWGGSSPNTGFDCSGLIYYAYKDVVKIKMPRTANEMYHLRDAAPVKRTELESGDLVFFKIANRGVAD
HVGVYLGNGKFIQSPRTGEEIRISMLNNDYWQDHYVGARRVVTPKTIR

Sequences:

>Translated_288_residues
MGSVIMRLMLTLFVLLFTQLFLNLAHASPQAHSSVEQKKGHVSQASPDDRKKRKADKSTKRSKIATTKGPVSKKTTEPRK
TGNNKTSTNKVVRNKINSSRTTESKTAANKKRTSSIRTAKTPYGRQRNKAQGKASTELAANNKLKLSPAHKKRYQKAKQT
AMSKLMKQVGKPYRWGGSSPNTGFDCSGLIYYAYKDVVKIKMPRTANEMYHLRDAAPVKRTELESGDLVFFKIANRGVAD
HVGVYLGNGKFIQSPRTGEEIRISMLNNDYWQDHYVGARRVVTPKTIR
>Mature_287_residues
GSVIMRLMLTLFVLLFTQLFLNLAHASPQAHSSVEQKKGHVSQASPDDRKKRKADKSTKRSKIATTKGPVSKKTTEPRKT
GNNKTSTNKVVRNKINSSRTTESKTAANKKRTSSIRTAKTPYGRQRNKAQGKASTELAANNKLKLSPAHKKRYQKAKQTA
MSKLMKQVGKPYRWGGSSPNTGFDCSGLIYYAYKDVVKIKMPRTANEMYHLRDAAPVKRTELESGDLVFFKIANRGVADH
VGVYLGNGKFIQSPRTGEEIRISMLNNDYWQDHYVGARRVVTPKTIR

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=287, Percent_Identity=50.8710801393728, Blast_Score=269, Evalue=2e-73,
Organism=Escherichia coli, GI1786421, Length=159, Percent_Identity=52.8301886792453, Blast_Score=186, Evalue=1e-48,
Organism=Escherichia coli, GI1788501, Length=125, Percent_Identity=35.2, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788001, Length=118, Percent_Identity=34.7457627118644, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 32302; Mature: 32170

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSVIMRLMLTLFVLLFTQLFLNLAHASPQAHSSVEQKKGHVSQASPDDRKKRKADKSTK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RSKIATTKGPVSKKTTEPRKTGNNKTSTNKVVRNKINSSRTTESKTAANKKRTSSIRTAK
HHHHCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
TPYGRQRNKAQGKASTELAANNKLKLSPAHKKRYQKAKQTAMSKLMKQVGKPYRWGGSSP
CCCCCCCCHHCCCHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCC
NTGFDCSGLIYYAYKDVVKIKMPRTANEMYHLRDAAPVKRTELESGDLVFFKIANRGVAD
CCCCCCCCEEHEEECCEEEEECCCCHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCCCHH
HVGVYLGNGKFIQSPRTGEEIRISMLNNDYWQDHYVGARRVVTPKTIR
HCCEEECCCEEECCCCCCCEEEEEECCCCCCHHHHCCCCEECCCCCCC
>Mature Secondary Structure 
GSVIMRLMLTLFVLLFTQLFLNLAHASPQAHSSVEQKKGHVSQASPDDRKKRKADKSTK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RSKIATTKGPVSKKTTEPRKTGNNKTSTNKVVRNKINSSRTTESKTAANKKRTSSIRTAK
HHHHCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
TPYGRQRNKAQGKASTELAANNKLKLSPAHKKRYQKAKQTAMSKLMKQVGKPYRWGGSSP
CCCCCCCCHHCCCHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCC
NTGFDCSGLIYYAYKDVVKIKMPRTANEMYHLRDAAPVKRTELESGDLVFFKIANRGVAD
CCCCCCCCEEHEEECCEEEEECCCCHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCCCHH
HVGVYLGNGKFIQSPRTGEEIRISMLNNDYWQDHYVGARRVVTPKTIR
HCCEEECCCEEECCCCCCCEEEEEECCCCCCHHHHCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]