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The map label for this gene is 51596538

Identifier: 51596538

GI number: 51596538

Start: 2610602

End: 2613142

Strand: Direct

Name: 51596538

Synonym: YPTB2214

Alternate gene names: NA

Gene position: 2610602-2613142 (Clockwise)

Preceding gene: 51596537

Following gene: 51596540

Centisome position: 55.02

GC content: 47.74

Gene sequence:

>2541_bases
ATGAAATCATTAACCCCGCAGTTACTTAATGGCCAACAACTTCATGACCAGTTACAGCAGGTAACACAAGGTATCGACCA
AGCGATTGATTGGGTTAAGAGTACCCGCCAACATGCTGTTCGTTTGGATAGAGAAGCCGAACACTTAACCATTAAGTTAC
GCCGTATGCGTAATAAAGCGCACCCTCTATCTGAGACCGCGCTAACCGCGATGACTATTGGTTTTGTGGGGCACTCACAG
GCGGGGAAAAAACACCTTATCTCGGCACTGGCGGCCAATGAACATGGCCGATTGGAAACCACGCTCGGGGGGGAAAAACT
CGACTTTTGGCAACAAATTAGGCCGGAATATCAAACAACTGGCTTGGTTACTCGCTTTAGCTATCAGACAGAAGGTCATC
AAACGCACGGTCATGAAAGCAGAGCAACAAATGAAGCCTATCCGGTTCAGCTCACCTTACTCAGCGAAGTAGATATCGCC
AAAATCATCGCCCGTGCTTTCTTGCTGGATTGCCCTCAGGAAAATCCAGCTTATTCGTTGGATGAGCAACAGATTACCGA
ACATCTACGGCAGTTGATGATGCACAGGCGGCCAATCATTAACGCTGGAATCAATAGCGATGATGTGATTGCACTTTGGG
ACTCCCTGGCCCACCACGACACACAACGCCAGAAAGAACTGGCGACTCACTTCTGGCCTACCGCGATTGAACTGGCACCG
TATCTGAGTATTGATGACCGGGCCAAATTATTTTCGTTATTGTGGGGAAAAAACGATCCACTCACTGACGCTTATCGCCA
TTTTTCCTACATTTTGCAGCACCTTAGCGGCGCACAGCAATTATTAGCACCGCTAAGTGTTTTGGTTGACGATACCCTGT
TACCTACCAATGGTGTCATGAATATTGCCACGCTTGGTGACTTGAATACACCTGCAGATAACCCTATCCAAGTGCTTCCC
TTGATCAGCGGTCATACCGCGAAATGCGTGACACTGTCACAAGCGGAATTGACGCTGTTAGCGGTGGAACTGAAGATCCC
ACTCGATAAACCCGCGCGTGAAAGTGCATTTGAATCCGTTGAATTGCTTAATTTTCCTGATGCTCGCGGTTCGCAAACTA
TCCCGGCATTAATGGAAAACGCCGCTTATCCGCTGGCCTCGCTACTGTCACAGGCTAAAAATGCCTATTTACTCGAACGT
TATACCAACCAACAGCAAATCAACCTGTTATTGGTGTGTACCGCCACCGATCAGCGTTCAGAGATAAAAAGTACCAGCAA
GGCATTGGATTATTGGGTTAAACAGACTCAGGGAGAGAGCGTTCAGATACGCTCGCGTCGTAATCCGGGTTTAATCTGGG
CCTTAACGCCCCATGATCAGCGCATTACCGCGAATCTACCTCTCTCCACCCCGACAGACGCCCAAACGCATGACGCGAAT
ATCAAAAATTACGATGAAGCGGTACAACGCTATGTTGGTAATCCCGGTGACAGTTGGGGAACCCTATTAGCATTGGATGC
ACGTGGGGTTGAACGGATGATCTCGTACCTATCGAAAGAAATCCTTCGGGATATCAAATCAGAACGTCTAACCGAACAAC
TTCACGAGTTACAACGGGAACTGACCAATAATCTGTTCGCGGGTTGGTATCAACCTTCGGTTACGGACGAACGACAGCAA
AAACAACGTATTGTAGAAATATTACTTAAAGCGTTGCAAACCCGTACTGGGGTACATGGTGAATTGTTGGAGCAATTACT
TCCTTCCCGCGATGAACTACGCCGCCTTTATCTGCAACAGCACCTTTATCTATCACCCCGCCTTTATCAACAAGAGAAAA
AAGGGGTTGCGGATTTTTTCACACCACTCGCCAGCACTGAACCTTTCAGTATCGGTATCGATATCGATCTGTTTAGTGAC
CTTCCCACTCCCACTGAGCCATCGCTGACACCACAAGCCAGACATGATAACGATGAAGCGGAGTATGCCGCTCATGTGCA
TTATTATTGGATAAATCATCTACGCCAACTGCCCGATAATACTGCGCTACTTGAATTACTGGGCGTCACTAAACCCACGA
TAGAACTGCTGGTCGCGGAATTCATCACTGCCAGTATTCGGCTGGATATTGCTGGGAATTTACGACAGGCACTGGCTGAT
AACGAACCGGCGGATCTGCATCGTGCAGCCAAAGCGGACCGTCAGGTTTCTCGTGCGCTCACTGTACTCGGTGATTTCAT
TGCCTGGTTAGGTTTTTTGCAAATCAGCGAAGATAAGCGCCCGGATAGCCGCATCAACCGAGGGTATAAAATTTTTGTCC
AGCCCCCTAAATCAGTATCAACTTTAGGGGTCTCTCACCGGTTAACGCAACTGGCATTAACCCCAACCAACAGTACCGCA
TTTTATATCTATGATTGGTTAGTGGGTTTGGGTGAAATGATTATTCAAAACGTGGGATATTCAGCCAGTAATGAGATAAG
CCCGGCACAGCGGCAACAACTGGCGGCAATATTATCGGTGATAAAACCCGCAAATGATTAA

Upstream 100 bases:

>100_bases
GTGTGCCCTTGCATCATCTGCGACTTAAATTGAACACATTAGCCAGCAATGGCTCAGGATCCCCCCATTATTGGATCGAC
AGCGGGAGCGTATTTAGAAA

Downstream 100 bases:

>100_bases
ATAGATGGCTGATAACGTTAAATAAAGGGGAACGTGCCACAAAAATGCGCAACTCCCCGACGGAGAAGCGCATTTTTTAA
ACAGCAGAACTCAAGTGACA

Product: virulence factor

Products: NA

Alternate protein names: Virulence Factor SrfC-Like Protein; Virulence Effector SrfC; Virulence Factor SrfC; Virulence Protein; Virulence Effector Protein; Virulence Factor Protein; Protein Virulence Factor-Like Protein; Type III Secretion System Effector; HopL1 Protein; Protein Conserved In Bacteria Virulence Factor; Type III Effector Protein; Coiled-Coil Structure

Number of amino acids: Translated: 846; Mature: 846

Protein sequence:

>846_residues
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKAHPLSETALTAMTIGFVGHSQ
AGKKHLISALAANEHGRLETTLGGEKLDFWQQIRPEYQTTGLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIA
KIIARAFLLDCPQENPAYSLDEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAP
YLSIDDRAKLFSLLWGKNDPLTDAYRHFSYILQHLSGAQQLLAPLSVLVDDTLLPTNGVMNIATLGDLNTPADNPIQVLP
LISGHTAKCVTLSQAELTLLAVELKIPLDKPARESAFESVELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLER
YTNQQQINLLLVCTATDQRSEIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDAN
IKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRELTNNLFAGWYQPSVTDERQQ
KQRIVEILLKALQTRTGVHGELLEQLLPSRDELRRLYLQQHLYLSPRLYQQEKKGVADFFTPLASTEPFSIGIDIDLFSD
LPTPTEPSLTPQARHDNDEAEYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIAGNLRQALAD
NEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPDSRINRGYKIFVQPPKSVSTLGVSHRLTQLALTPTNSTA
FYIYDWLVGLGEMIIQNVGYSASNEISPAQRQQLAAILSVIKPAND

Sequences:

>Translated_846_residues
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKAHPLSETALTAMTIGFVGHSQ
AGKKHLISALAANEHGRLETTLGGEKLDFWQQIRPEYQTTGLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIA
KIIARAFLLDCPQENPAYSLDEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAP
YLSIDDRAKLFSLLWGKNDPLTDAYRHFSYILQHLSGAQQLLAPLSVLVDDTLLPTNGVMNIATLGDLNTPADNPIQVLP
LISGHTAKCVTLSQAELTLLAVELKIPLDKPARESAFESVELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLER
YTNQQQINLLLVCTATDQRSEIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDAN
IKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRELTNNLFAGWYQPSVTDERQQ
KQRIVEILLKALQTRTGVHGELLEQLLPSRDELRRLYLQQHLYLSPRLYQQEKKGVADFFTPLASTEPFSIGIDIDLFSD
LPTPTEPSLTPQARHDNDEAEYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIAGNLRQALAD
NEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPDSRINRGYKIFVQPPKSVSTLGVSHRLTQLALTPTNSTA
FYIYDWLVGLGEMIIQNVGYSASNEISPAQRQQLAAILSVIKPAND
>Mature_846_residues
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKAHPLSETALTAMTIGFVGHSQ
AGKKHLISALAANEHGRLETTLGGEKLDFWQQIRPEYQTTGLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIA
KIIARAFLLDCPQENPAYSLDEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAP
YLSIDDRAKLFSLLWGKNDPLTDAYRHFSYILQHLSGAQQLLAPLSVLVDDTLLPTNGVMNIATLGDLNTPADNPIQVLP
LISGHTAKCVTLSQAELTLLAVELKIPLDKPARESAFESVELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLER
YTNQQQINLLLVCTATDQRSEIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDAN
IKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRELTNNLFAGWYQPSVTDERQQ
KQRIVEILLKALQTRTGVHGELLEQLLPSRDELRRLYLQQHLYLSPRLYQQEKKGVADFFTPLASTEPFSIGIDIDLFSD
LPTPTEPSLTPQARHDNDEAEYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIAGNLRQALAD
NEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPDSRINRGYKIFVQPPKSVSTLGVSHRLTQLALTPTNSTA
FYIYDWLVGLGEMIIQNVGYSASNEISPAQRQQLAAILSVIKPAND

Specific function: Unknown

COG id: COG4458

COG function: function code S; Uncharacterized protein conserved in bacteria, putative virulence factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95202; Mature: 95202

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKA
CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
HPLSETALTAMTIGFVGHSQAGKKHLISALAANEHGRLETTLGGEKLDFWQQIRPEYQTT
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHCCCHHHC
GLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIAKIIARAFLLDCPQENPAYSL
CEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
DEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAP
CHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
YLSIDDRAKLFSLLWGKNDPLTDAYRHFSYILQHLSGAQQLLAPLSVLVDDTLLPTNGVM
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCE
NIATLGDLNTPADNPIQVLPLISGHTAKCVTLSQAELTLLAVELKIPLDKPARESAFESV
EEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHH
ELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLERYTNQQQINLLLVCTATDQRS
HHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCCCEEEEEEEEECCCCHH
EIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDAN
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCC
IKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRE
CCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTNNLFAGWYQPSVTDERQQKQRIVEILLKALQTRTGVHGELLEQLLPSRDELRRLYLQQ
HHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHH
HLYLSPRLYQQEKKGVADFFTPLASTEPFSIGIDIDLFSDLPTPTEPSLTPQARHDNDEA
HHHCCCHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCH
EYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIAGNLRQALAD
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECHHHHHHHCC
NEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPDSRINRGYKIFVQPPKSVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCCHH
TLGVSHRLTQLALTPTNSTAFYIYDWLVGLGEMIIQNVGYSASNEISPAQRQQLAAILSV
HHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
IKPAND
HCCCCC
>Mature Secondary Structure
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKA
CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
HPLSETALTAMTIGFVGHSQAGKKHLISALAANEHGRLETTLGGEKLDFWQQIRPEYQTT
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHCCCHHHC
GLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIAKIIARAFLLDCPQENPAYSL
CEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
DEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAP
CHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
YLSIDDRAKLFSLLWGKNDPLTDAYRHFSYILQHLSGAQQLLAPLSVLVDDTLLPTNGVM
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCE
NIATLGDLNTPADNPIQVLPLISGHTAKCVTLSQAELTLLAVELKIPLDKPARESAFESV
EEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHH
ELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLERYTNQQQINLLLVCTATDQRS
HHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCCCEEEEEEEEECCCCHH
EIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDAN
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCC
IKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRE
CCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTNNLFAGWYQPSVTDERQQKQRIVEILLKALQTRTGVHGELLEQLLPSRDELRRLYLQQ
HHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHH
HLYLSPRLYQQEKKGVADFFTPLASTEPFSIGIDIDLFSDLPTPTEPSLTPQARHDNDEA
HHHCCCHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCH
EYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIAGNLRQALAD
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECHHHHHHHCC
NEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPDSRINRGYKIFVQPPKSVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCCHH
TLGVSHRLTQLALTPTNSTAFYIYDWLVGLGEMIIQNVGYSASNEISPAQRQQLAAILSV
HHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
IKPAND
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA