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The map label for this gene is rnfG

Identifier: 51596488

GI number: 51596488

Start: 2541325

End: 2541954

Strand: Reverse

Name: rnfG

Synonym: YPTB2162

Alternate gene names: 51596488

Gene position: 2541954-2541325 (Counterclockwise)

Preceding gene: 51596489

Following gene: 51596487

Centisome position: 53.57

GC content: 49.52

Gene sequence:

>630_bases
ATGCTAAAAACAATGAGGCGTCACGGCATCACTCTGGCGCTGTTTGCTGCCGGTGCCACAGGGTTAACTGCGGTTGTTAA
CTCACTGACTGAAAACACGATTGCTCACCAAGCAGCATTACAGCAAAAAGCATTGCTGGACCAAGTCGTCCCGGCAGAAA
ATTATGATAATGACATGCAAGCAGAATGTTACGTTGTCACTGATTCAGCCTTGGGTAATATGGCTCCCCATCGCCTGTAC
CTTGCGCGTAAAGGTAACCAACCGGTAGCTGCCGCAATCGAAACCACAGCACCAGATGGCTATTCCGGTGCGATTCAACT
GTTGGTCGGTGCAGATTTTCACGGTAATGTTCTTGGCAGCCGGGTGATTGAGCATCATGAAACCCCAGGTTTAGGGGATA
AAATTGATATCCGTATCTCTGATTGGATCAACCATTTCAGCGGTCAACACGTAACAGGTGATGACGATAAGCGTTGGGCG
GTGAAAAAAGATGGCGGGTCGTTTGATCAGTTTACTGGTGCTACCATCACACCACGGGCTGTCGTGCGGGCAGTAAAAAA
TGCGGCACTGTATTTGCAAACACTGCCACCACAGCTTAGTCGCCTGCCCTCCTGTGGAGAAGATCAATGA

Upstream 100 bases:

>100_bases
TTTTGCCGTGTTGCTCGCCAATATTACAGTTCCGTTGATTGACCACTATACCCAACCTCGGGTCTATGGCCATAAAAGCG
GGCACAAATAAGGAGCCGTT

Downstream 100 bases:

>100_bases
GTGAAGCGAAAAAACTGTTAGCACAAGGGTTGTGGAAAAATAACTCTGCGCTGGTGCAACTGTTGGGGCTCTGTCCATTG
TTGGCAGTCTCTTCCACGGC

Product: electron transport complex protein RnfG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MLKTMRRHGITLALFAAGATGLTAVVNSLTENTIAHQAALQQKALLDQVVPAENYDNDMQAECYVVTDSALGNMAPHRLY
LARKGNQPVAAAIETTAPDGYSGAIQLLVGADFHGNVLGSRVIEHHETPGLGDKIDIRISDWINHFSGQHVTGDDDKRWA
VKKDGGSFDQFTGATITPRAVVRAVKNAALYLQTLPPQLSRLPSCGEDQ

Sequences:

>Translated_209_residues
MLKTMRRHGITLALFAAGATGLTAVVNSLTENTIAHQAALQQKALLDQVVPAENYDNDMQAECYVVTDSALGNMAPHRLY
LARKGNQPVAAAIETTAPDGYSGAIQLLVGADFHGNVLGSRVIEHHETPGLGDKIDIRISDWINHFSGQHVTGDDDKRWA
VKKDGGSFDQFTGATITPRAVVRAVKNAALYLQTLPPQLSRLPSCGEDQ
>Mature_209_residues
MLKTMRRHGITLALFAAGATGLTAVVNSLTENTIAHQAALQQKALLDQVVPAENYDNDMQAECYVVTDSALGNMAPHRLY
LARKGNQPVAAAIETTAPDGYSGAIQLLVGADFHGNVLGSRVIEHHETPGLGDKIDIRISDWINHFSGQHVTGDDDKRWA
VKKDGGSFDQFTGATITPRAVVRAVKNAALYLQTLPPQLSRLPSCGEDQ

Specific function: May be part of a membrane complex involved in electron transport

COG id: COG4659

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfG

Gene ontology:

Cell location: Cell inner membrane (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnfG family

Homologues:

Organism=Escherichia coli, GI1787918, Length=207, Percent_Identity=70.048309178744, Blast_Score=312, Evalue=1e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFG_YERPE (Q8ZED3)

Other databases:

- EMBL:   AL590842
- EMBL:   AE009952
- EMBL:   AE017042
- PIR:   AC0273
- RefSeq:   NP_669395.1
- RefSeq:   NP_993378.1
- RefSeq:   YP_002347212.1
- ProteinModelPortal:   Q8ZED3
- GeneID:   1147029
- GeneID:   1175074
- GeneID:   2765158
- GenomeReviews:   AE009952_GR
- GenomeReviews:   AE017042_GR
- GenomeReviews:   AL590842_GR
- KEGG:   ype:YPO2241
- KEGG:   ypk:y2082
- KEGG:   ypm:YP_2039
- HOGENOM:   HBG454413
- OMA:   GMFDQFT
- ProtClustDB:   PRK01908
- BioCyc:   YPES187410:Y2082-MONOMER
- BioCyc:   YPES214092:YPO2241-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_00479
- InterPro:   IPR022989
- InterPro:   IPR010209
- InterPro:   IPR007329
- SMART:   SM00900
- TIGRFAMs:   TIGR01947

Pfam domain/function: PF04205 FMN_bind

EC number: NA

Molecular weight: Translated: 22484; Mature: 22484

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1acc4058)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTMRRHGITLALFAAGATGLTAVVNSLTENTIAHQAALQQKALLDQVVPAENYDNDMQ
CCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AECYVVTDSALGNMAPHRLYLARKGNQPVAAAIETTAPDGYSGAIQLLVGADFHGNVLGS
EEEEEEECCHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHH
RVIEHHETPGLGDKIDIRISDWINHFSGQHVTGDDDKRWAVKKDGGSFDQFTGATITPRA
HHHHHCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHH
VVRAVKNAALYLQTLPPQLSRLPSCGEDQ
HHHHHHHHHEEEECCCHHHHHCCCCCCCH
>Mature Secondary Structure
MLKTMRRHGITLALFAAGATGLTAVVNSLTENTIAHQAALQQKALLDQVVPAENYDNDMQ
CCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AECYVVTDSALGNMAPHRLYLARKGNQPVAAAIETTAPDGYSGAIQLLVGADFHGNVLGS
EEEEEEECCHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHH
RVIEHHETPGLGDKIDIRISDWINHFSGQHVTGDDDKRWAVKKDGGSFDQFTGATITPRA
HHHHHCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHH
VVRAVKNAALYLQTLPPQLSRLPSCGEDQ
HHHHHHHHHEEEECCCHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430