| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596392
Identifier: 51596392
GI number: 51596392
Start: 2432081
End: 2433253
Strand: Reverse
Name: 51596392
Synonym: YPTB2066
Alternate gene names: NA
Gene position: 2433253-2432081 (Counterclockwise)
Preceding gene: 51596393
Following gene: 51596387
Centisome position: 51.28
GC content: 54.65
Gene sequence:
>1173_bases ATGCGAAAAACTTCATCACTGTTTCTCCTGTTTGGCACGTTGTTCAGCGCAGGAGGCTATGGTGCCACATTTCTCATTTC TGCTTGGTTTCACTCGCAGGGGGGCAACGACATTGACGCTGGGGCAACCCTCGGTATGGCTCTGTTCGGGACACTCATCG GTGTGCCTTTGGTTGGCTGGTTTGCTGGAAAATTGGACGCCTCACGTCTGGCGGCGCTGGCAGCACTGATCCAGTCCTGT GGCTACTTTCTACTGGGGAGCCTCAGTGGCGGATCCGGCTATCTGCCCCATGTAGCGGCACTGTTGATTGGCCTGGGCTG GGGCATGTTCTATATCGGGGGGCCAATGGCGCTGTCTGAACGCCTCACCGATACCGAACGAGGCCCTGGTTTTACACGCT TCAGTGCATTCCAGATGACCGGAATTTGTGGTAGCCCTATCCTGCTGACTATCGCGGTGGTACAAGGAGGGATCCCCATC CAGGCCGCATTTCTGTTGGTGGGCGTGATGGGGGTCTTCGCCTCTATCCTGTTGATGATTTTTGGCACCCGAGAGCCACT TATCCGGCATGAGAATTCACTGCGGCCTTGGGTAAAAAAAATTACCGTACTCGCCAAAAGCGGAGTCATCAGACCCATCG TGATGGTCTGTCTAGGGGGGGCCGTTTTTTCTGGAATGATGTCGTTTCAGGACTCGCTCACCGACGGTTCATTGGCCAGC GCCAGTACTTTTTTTGCCGTGCATGCCACTACCGCCGTGGTTTCACGCCTGTTACTTGCACACAAACTATCAAGCTGGCC CCGTACCCCACTCGTAGCGGTACTCTTGTGTTGCCTAATGATCGGCCTTGTGTGCCTGTTAGGAATACCGACGCATGTGA GTTTCCAGATCGCTGCCGCCATGCTAACCGGCGCTGGCTACGGTCTGTTATACCCCGTGATTCAAACTTGGGCGGTCAAT GAATCGGCCCCTGAAAACCGTCACGCCGCTCTGACTTGGTTTGTCGTTGCCTACTTCGTGGGTATTTTTGGTTTTCCGCC TTTTGGGGGCTGGGTACTGGTGACAGTAGGCAAGGTTTGGTTTATCTGGGTGCTGGCTACGTTGGCCACATTAGAGTTAG TGACAGCGATAGTGAAGTGGCCGCAAACCACTCACCACCCGCTATCATCATAG
Upstream 100 bases:
>100_bases AGATTATGTCTGCCAGCGTCTGGAAAATACGGTGAAAATGCTGAGATCAATGGCTCCGCTCTCATCTGCTACAACCACAA ACGAGACAGGAGTCTAAATC
Downstream 100 bases:
>100_bases CAATCTATCATTATAACAATCCATCATCATAACAATGAAGGTAAAGATGGCAGCTTAGGCTGTCATCGGCTAAAGCAAGT TAGACATGCTGCCTTAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Protein; Transporter Facilitator Family; Transmembrane Protein; MFS Transporter Protein
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MRKTSSLFLLFGTLFSAGGYGATFLISAWFHSQGGNDIDAGATLGMALFGTLIGVPLVGWFAGKLDASRLAALAALIQSC GYFLLGSLSGGSGYLPHVAALLIGLGWGMFYIGGPMALSERLTDTERGPGFTRFSAFQMTGICGSPILLTIAVVQGGIPI QAAFLLVGVMGVFASILLMIFGTREPLIRHENSLRPWVKKITVLAKSGVIRPIVMVCLGGAVFSGMMSFQDSLTDGSLAS ASTFFAVHATTAVVSRLLLAHKLSSWPRTPLVAVLLCCLMIGLVCLLGIPTHVSFQIAAAMLTGAGYGLLYPVIQTWAVN ESAPENRHAALTWFVVAYFVGIFGFPPFGGWVLVTVGKVWFIWVLATLATLELVTAIVKWPQTTHHPLSS
Sequences:
>Translated_390_residues MRKTSSLFLLFGTLFSAGGYGATFLISAWFHSQGGNDIDAGATLGMALFGTLIGVPLVGWFAGKLDASRLAALAALIQSC GYFLLGSLSGGSGYLPHVAALLIGLGWGMFYIGGPMALSERLTDTERGPGFTRFSAFQMTGICGSPILLTIAVVQGGIPI QAAFLLVGVMGVFASILLMIFGTREPLIRHENSLRPWVKKITVLAKSGVIRPIVMVCLGGAVFSGMMSFQDSLTDGSLAS ASTFFAVHATTAVVSRLLLAHKLSSWPRTPLVAVLLCCLMIGLVCLLGIPTHVSFQIAAAMLTGAGYGLLYPVIQTWAVN ESAPENRHAALTWFVVAYFVGIFGFPPFGGWVLVTVGKVWFIWVLATLATLELVTAIVKWPQTTHHPLSS >Mature_390_residues MRKTSSLFLLFGTLFSAGGYGATFLISAWFHSQGGNDIDAGATLGMALFGTLIGVPLVGWFAGKLDASRLAALAALIQSC GYFLLGSLSGGSGYLPHVAALLIGLGWGMFYIGGPMALSERLTDTERGPGFTRFSAFQMTGICGSPILLTIAVVQGGIPI QAAFLLVGVMGVFASILLMIFGTREPLIRHENSLRPWVKKITVLAKSGVIRPIVMVCLGGAVFSGMMSFQDSLTDGSLAS ASTFFAVHATTAVVSRLLLAHKLSSWPRTPLVAVLLCCLMIGLVCLLGIPTHVSFQIAAAMLTGAGYGLLYPVIQTWAVN ESAPENRHAALTWFVVAYFVGIFGFPPFGGWVLVTVGKVWFIWVLATLATLELVTAIVKWPQTTHHPLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41319; Mature: 41319
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTSSLFLLFGTLFSAGGYGATFLISAWFHSQGGNDIDAGATLGMALFGTLIGVPLVGW CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FAGKLDASRLAALAALIQSCGYFLLGSLSGGSGYLPHVAALLIGLGWGMFYIGGPMALSE HHHCCCHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH RLTDTERGPGFTRFSAFQMTGICGSPILLTIAVVQGGIPIQAAFLLVGVMGVFASILLMI HHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FGTREPLIRHENSLRPWVKKITVLAKSGVIRPIVMVCLGGAVFSGMMSFQDSLTDGSLAS HCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ASTFFAVHATTAVVSRLLLAHKLSSWPRTPLVAVLLCCLMIGLVCLLGIPTHVSFQIAAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MLTGAGYGLLYPVIQTWAVNESAPENRHAALTWFVVAYFVGIFGFPPFGGWVLVTVGKVW HHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH FIWVLATLATLELVTAIVKWPQTTHHPLSS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRKTSSLFLLFGTLFSAGGYGATFLISAWFHSQGGNDIDAGATLGMALFGTLIGVPLVGW CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FAGKLDASRLAALAALIQSCGYFLLGSLSGGSGYLPHVAALLIGLGWGMFYIGGPMALSE HHHCCCHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH RLTDTERGPGFTRFSAFQMTGICGSPILLTIAVVQGGIPIQAAFLLVGVMGVFASILLMI HHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FGTREPLIRHENSLRPWVKKITVLAKSGVIRPIVMVCLGGAVFSGMMSFQDSLTDGSLAS HCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ASTFFAVHATTAVVSRLLLAHKLSSWPRTPLVAVLLCCLMIGLVCLLGIPTHVSFQIAAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MLTGAGYGLLYPVIQTWAVNESAPENRHAALTWFVVAYFVGIFGFPPFGGWVLVTVGKVW HHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH FIWVLATLATLELVTAIVKWPQTTHHPLSS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA