| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is cutC
Identifier: 51596357
GI number: 51596357
Start: 2395220
End: 2395984
Strand: Direct
Name: cutC
Synonym: YPTB2031
Alternate gene names: 51596357
Gene position: 2395220-2395984 (Clockwise)
Preceding gene: 51596356
Following gene: 51596362
Centisome position: 50.48
GC content: 48.89
Gene sequence:
>765_bases ATGACTAAATTGGAAGTTTGTTGCTATAGCGTTGATTGTGCACAAATAGCAGAAAAGGCAGGAGCCGACCGGGTTGAATT GTGCTGTGGTCAGTCTGAAGGGGGGTTGACGCCGAGTGTCGGCGCATTAATGCAGGCCAGAGAAACCGTGACTATCCCGG TTCATCCGATAGTTCGGCCACGTGGTGGTGATTTTTGTTACAGCAGCAATGATTTTACTATTATGAAAAATGATATTGCG CGGATCCGTGACTTGGGCTTTGCTGGCGTCGTCGTTGGCGTACTGGATACGGATGGGCATATCGATATGCCACGGATGCG GGAGATTATGTCAGTAAGTGGTTCACTGGCGGTAACCTTCCATCGCGCATTTGATATGTGCCAAAATCCGATGATTGCCT TAAAGCAATTGGCTGAACTTAATGTGGCGCGTATTTTAACCTCAGGGCAGCAGCAAAATGCTGAATTGGGTTTAGCTCTG TTGAAAGATTTGGTTGCAGCAACCAAGGATCAAGGCCCGATTATTATGGCAGGGGCCGGGGTGCGGTTGACGAATATGCA GAAGTTTATTGATGCAGGGATTCGTGAATTACACAGTTCTGCCGGGCGGACGGTGCCATCAACCATGCGATACCGTAAAG CCGGGGTGACGATGTGCGCCGACAGTGATGTCGATGAGTTTTCTCACTATTGTGTTGATGGTGAGGTCGTTGAAGCTATG AAGAGTTTATTGGTTATGGGATCGCCTCTTGCCAAGCACACCTAG
Upstream 100 bases:
>100_bases GAGAGAGATATTCGGCATTTTGTTAATTTGCCAGTGAATCATTAATTTTCAGGTGATTTACACTCACTGTCGCAGTGAAA TCTGTCAAACGGGGGAGATA
Downstream 100 bases:
>100_bases TGCGCCTAATTCAGTACACGATATATTGATATCTATCCCTCTTACGTGAAGTTGCAGGGTGGTTAGCTGCTCTCAATTAT CTGAGTTACGGGGGTGTCAA
Product: copper homeostasis protein CutC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTKLEVCCYSVDCAQIAEKAGADRVELCCGQSEGGLTPSVGALMQARETVTIPVHPIVRPRGGDFCYSSNDFTIMKNDIA RIRDLGFAGVVVGVLDTDGHIDMPRMREIMSVSGSLAVTFHRAFDMCQNPMIALKQLAELNVARILTSGQQQNAELGLAL LKDLVAATKDQGPIIMAGAGVRLTNMQKFIDAGIRELHSSAGRTVPSTMRYRKAGVTMCADSDVDEFSHYCVDGEVVEAM KSLLVMGSPLAKHT
Sequences:
>Translated_254_residues MTKLEVCCYSVDCAQIAEKAGADRVELCCGQSEGGLTPSVGALMQARETVTIPVHPIVRPRGGDFCYSSNDFTIMKNDIA RIRDLGFAGVVVGVLDTDGHIDMPRMREIMSVSGSLAVTFHRAFDMCQNPMIALKQLAELNVARILTSGQQQNAELGLAL LKDLVAATKDQGPIIMAGAGVRLTNMQKFIDAGIRELHSSAGRTVPSTMRYRKAGVTMCADSDVDEFSHYCVDGEVVEAM KSLLVMGSPLAKHT >Mature_253_residues TKLEVCCYSVDCAQIAEKAGADRVELCCGQSEGGLTPSVGALMQARETVTIPVHPIVRPRGGDFCYSSNDFTIMKNDIAR IRDLGFAGVVVGVLDTDGHIDMPRMREIMSVSGSLAVTFHRAFDMCQNPMIALKQLAELNVARILTSGQQQNAELGLALL KDLVAATKDQGPIIMAGAGVRLTNMQKFIDAGIRELHSSAGRTVPSTMRYRKAGVTMCADSDVDEFSHYCVDGEVVEAMK SLLVMGSPLAKHT
Specific function: Involved in copper homeostasis [H]
COG id: COG3142
COG function: function code P; Uncharacterized protein involved in copper resistance
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutC family [H]
Homologues:
Organism=Homo sapiens, GI148596990, Length=241, Percent_Identity=42.3236514522822, Blast_Score=184, Evalue=6e-47, Organism=Escherichia coli, GI87081995, Length=244, Percent_Identity=56.5573770491803, Blast_Score=297, Evalue=4e-82, Organism=Caenorhabditis elegans, GI17556905, Length=202, Percent_Identity=31.1881188118812, Blast_Score=104, Evalue=4e-23, Organism=Drosophila melanogaster, GI21355415, Length=251, Percent_Identity=37.0517928286853, Blast_Score=140, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005627 [H]
Pfam domain/function: PF03932 CutC [H]
EC number: NA
Molecular weight: Translated: 27341; Mature: 27210
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLEVCCYSVDCAQIAEKAGADRVELCCGQSEGGLTPSVGALMQARETVTIPVHPIVRP CCCEEEEEEECCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCEEEEECCCCCCC RGGDFCYSSNDFTIMKNDIARIRDLGFAGVVVGVLDTDGHIDMPRMREIMSVSGSLAVTF CCCCEEECCCCCEEEHHHHHHHHHCCHHHEEEEEEECCCCCCCHHHHHHHHCCCCEEEHH HRAFDMCQNPMIALKQLAELNVARILTSGQQQNAELGLALLKDLVAATKDQGPIIMAGAG HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCC VRLTNMQKFIDAGIRELHSSAGRTVPSTMRYRKAGVTMCADSDVDEFSHYCVDGEVVEAM EEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCHHHHHHHCCCHHHHHHH KSLLVMGSPLAKHT HHHHHHCCCHHCCC >Mature Secondary Structure TKLEVCCYSVDCAQIAEKAGADRVELCCGQSEGGLTPSVGALMQARETVTIPVHPIVRP CCEEEEEEECCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCEEEEECCCCCCC RGGDFCYSSNDFTIMKNDIARIRDLGFAGVVVGVLDTDGHIDMPRMREIMSVSGSLAVTF CCCCEEECCCCCEEEHHHHHHHHHCCHHHEEEEEEECCCCCCCHHHHHHHHCCCCEEEHH HRAFDMCQNPMIALKQLAELNVARILTSGQQQNAELGLALLKDLVAATKDQGPIIMAGAG HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCC VRLTNMQKFIDAGIRELHSSAGRTVPSTMRYRKAGVTMCADSDVDEFSHYCVDGEVVEAM EEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCHHHHHHHCCCHHHHHHH KSLLVMGSPLAKHT HHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA