| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596200
Identifier: 51596200
GI number: 51596200
Start: 2212855
End: 2213622
Strand: Reverse
Name: 51596200
Synonym: YPTB1865
Alternate gene names: NA
Gene position: 2213622-2212855 (Counterclockwise)
Preceding gene: 51596201
Following gene: 51596199
Centisome position: 46.65
GC content: 43.36
Gene sequence:
>768_bases ATGACAGAACAAAAAAACAACACTGCGCATATTACCATTTCATATTTGCGTGCTTTCATAAGTAGCAGTCCAGCTATCGC TTTATCAATGCTGACAAGAGAAAGAGCGCTTACCGATCTTGCGCAACTAGAAGGTATGTTAAATAGTCAATCGGCCTCTA TTAGCGCACTGAAAGAGCAGGTAAAAATTGCGTCTGGCGCTGCAATGAAAGCATCGGGCTATTTAGATTCAATAATAGCA GCGATTGAAACGACAACACACGGTAAAAACTGCGCTGCCAATTACGCAGACGAGACTGCTTTCAATGTTATTTCAGCTAT CCATAAAACTGAATCAGCCTATAGAGAAGCCTTGCGCACAGCGGAAGCATTCCAAAAGACAAGATTAAAAGTGGAACCTA CCAGCGATCTATTCGATGCCCATTCATATGCATATTTTACCCATTACGCTCCCTCTCCTGGTATTTATGGACTTACCTCC CGTCGCTCAGGGAAGGCCACTTACGCGCAATATATGACAATTTCATCTGAAATCATTGATGAAGCTATCCGCGCCTCAAA AATACATCCCAAATGGCCGACTGATGTAGTTCACGCTGTCTCTATTCTCACCGAGGAATCAGGCGAGTTAATGAAAGCGG CTATTGAATACCATTATAACAATGGCGATATAGAAGCCGTCCGCGAGGAGGCTATCCAGACGGGTGCAATGGCTTTGCGT GTATTGATGAATATCGATAAATACAACCGTCCGTCTGACGAAAAATAA
Upstream 100 bases:
>100_bases CCGAAAGACTTGTTATAAATAAATCGCATTTTAACGAGTGATTAAATAAGGCGTATTTACTGCGTCGGGCTTCCTATTAT CTAAAATAAGGCCATACAAC
Downstream 100 bases:
>100_bases ACACATATCCCTTTGGCGCATTGCGTTAGAGGGAGTTAATTTTTTAGGGGTGTGAAATGAAAAATAATAAATTAGCTAAA GCCATTGAAGCATTTATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTEQKNNTAHITISYLRAFISSSPAIALSMLTRERALTDLAQLEGMLNSQSASISALKEQVKIASGAAMKASGYLDSIIA AIETTTHGKNCAANYADETAFNVISAIHKTESAYREALRTAEAFQKTRLKVEPTSDLFDAHSYAYFTHYAPSPGIYGLTS RRSGKATYAQYMTISSEIIDEAIRASKIHPKWPTDVVHAVSILTEESGELMKAAIEYHYNNGDIEAVREEAIQTGAMALR VLMNIDKYNRPSDEK
Sequences:
>Translated_255_residues MTEQKNNTAHITISYLRAFISSSPAIALSMLTRERALTDLAQLEGMLNSQSASISALKEQVKIASGAAMKASGYLDSIIA AIETTTHGKNCAANYADETAFNVISAIHKTESAYREALRTAEAFQKTRLKVEPTSDLFDAHSYAYFTHYAPSPGIYGLTS RRSGKATYAQYMTISSEIIDEAIRASKIHPKWPTDVVHAVSILTEESGELMKAAIEYHYNNGDIEAVREEAIQTGAMALR VLMNIDKYNRPSDEK >Mature_254_residues TEQKNNTAHITISYLRAFISSSPAIALSMLTRERALTDLAQLEGMLNSQSASISALKEQVKIASGAAMKASGYLDSIIAA IETTTHGKNCAANYADETAFNVISAIHKTESAYREALRTAEAFQKTRLKVEPTSDLFDAHSYAYFTHYAPSPGIYGLTSR RSGKATYAQYMTISSEIIDEAIRASKIHPKWPTDVVHAVSILTEESGELMKAAIEYHYNNGDIEAVREEAIQTGAMALRV LMNIDKYNRPSDEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28037; Mature: 27906
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQKNNTAHITISYLRAFISSSPAIALSMLTRERALTDLAQLEGMLNSQSASISALKEQ CCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VKIASGAAMKASGYLDSIIAAIETTTHGKNCAANYADETAFNVISAIHKTESAYREALRT HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AEAFQKTRLKVEPTSDLFDAHSYAYFTHYAPSPGIYGLTSRRSGKATYAQYMTISSEIID HHHHHHHCEECCCCHHHHHCCCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHH EAIRASKIHPKWPTDVVHAVSILTEESGELMKAAIEYHYNNGDIEAVREEAIQTGAMALR HHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VLMNIDKYNRPSDEK HHHHHHHCCCCCCCC >Mature Secondary Structure TEQKNNTAHITISYLRAFISSSPAIALSMLTRERALTDLAQLEGMLNSQSASISALKEQ CCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VKIASGAAMKASGYLDSIIAAIETTTHGKNCAANYADETAFNVISAIHKTESAYREALRT HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AEAFQKTRLKVEPTSDLFDAHSYAYFTHYAPSPGIYGLTSRRSGKATYAQYMTISSEIID HHHHHHHCEECCCCHHHHHCCCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHH EAIRASKIHPKWPTDVVHAVSILTEESGELMKAAIEYHYNNGDIEAVREEAIQTGAMALR HHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VLMNIDKYNRPSDEK HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA