| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is 51596187
Identifier: 51596187
GI number: 51596187
Start: 2200185
End: 2200580
Strand: Reverse
Name: 51596187
Synonym: YPTB1852
Alternate gene names: NA
Gene position: 2200580-2200185 (Counterclockwise)
Preceding gene: 51596188
Following gene: 51596186
Centisome position: 46.38
GC content: 52.78
Gene sequence:
>396_bases ATGTTAACCAATAAATTTATTCTCGGCAAAGCCAGCGAAAGTAATCTGATCGGCGTACATCCTGATTTGGTTAAAGTGGT GCGCCGCGCGCTGGAGCTGACCCCGCTTGATTTTAAAGTGATTGAGGGCTGTCGCACGCTGGAACGCCAGCGCGAACTGG TCAAAGTCGGAGCCAGCCAAACCTTAAACAGCCGCCACTTAACCGGCCATGCGGTAGATATTGTACCGCTGCCACGCGGT AAGGTCAGTTGGGAGTGGAAATATTTTTATCCAATGGCTGACGCAATGAAACAGGCCGCTGCCGAGCTGAGGATCGCCGT GGAATGGGGCGGTAACTGGACCACCTTTAAAGACGGCCCACATTTTCAATTGCCCGCCCGTCAATATCCGAGCTGA
Upstream 100 bases:
>100_bases AAAATAGAAATTTTTATCAGTTGTTTGATCGGTCTGATTGGCTTGCAGGCTATCCGCGAGCTGGTATTCAAAATCATCAA TAAAAAGGCAGGAACCACTG
Downstream 100 bases:
>100_bases CACCATGCCACTCTTCAACACCGCTCCGCTCGCATGGGCGATTGCCGCCGCCTTACTGCTTGCCGGTGGCGTACAGACTT ACCGCTTGTCTGAGGCTCGG
Product: bacteriophage P7 related protein
Products: NA
Alternate protein names: Phage Endolysin; Phage-Related Protein; Phage Protein; Bacteriophage P7 Related Protein; Phagelysin; Peptidase; Lysozyme; L-Alanyl-D-Glutamate Peptidase; Phage Capsid Scaffolding Protein
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MLTNKFILGKASESNLIGVHPDLVKVVRRALELTPLDFKVIEGCRTLERQRELVKVGASQTLNSRHLTGHAVDIVPLPRG KVSWEWKYFYPMADAMKQAAAELRIAVEWGGNWTTFKDGPHFQLPARQYPS
Sequences:
>Translated_131_residues MLTNKFILGKASESNLIGVHPDLVKVVRRALELTPLDFKVIEGCRTLERQRELVKVGASQTLNSRHLTGHAVDIVPLPRG KVSWEWKYFYPMADAMKQAAAELRIAVEWGGNWTTFKDGPHFQLPARQYPS >Mature_131_residues MLTNKFILGKASESNLIGVHPDLVKVVRRALELTPLDFKVIEGCRTLERQRELVKVGASQTLNSRHLTGHAVDIVPLPRG KVSWEWKYFYPMADAMKQAAAELRIAVEWGGNWTTFKDGPHFQLPARQYPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14841; Mature: 14841
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTNKFILGKASESNLIGVHPDLVKVVRRALELTPLDFKVIEGCRTLERQRELVKVGASQ CCCCCEEEEECCCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC TLNSRHLTGHAVDIVPLPRGKVSWEWKYFYPMADAMKQAAAELRIAVEWGGNWTTFKDGP CCCCCCCCCCEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHEEEEEEECCCEEECCCCC HFQLPARQYPS CEECCCCCCCC >Mature Secondary Structure MLTNKFILGKASESNLIGVHPDLVKVVRRALELTPLDFKVIEGCRTLERQRELVKVGASQ CCCCCEEEEECCCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC TLNSRHLTGHAVDIVPLPRGKVSWEWKYFYPMADAMKQAAAELRIAVEWGGNWTTFKDGP CCCCCCCCCCEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHEEEEEEECCCEEECCCCC HFQLPARQYPS CEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA