| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596165
Identifier: 51596165
GI number: 51596165
Start: 2174583
End: 2175974
Strand: Direct
Name: 51596165
Synonym: YPTB1830
Alternate gene names: NA
Gene position: 2174583-2175974 (Clockwise)
Preceding gene: 51596164
Following gene: 51596166
Centisome position: 45.83
GC content: 46.98
Gene sequence:
>1392_bases ATGGGCGTACAAGGTTTAGCGGACGGTTTTCTTGCTGGCTTCAATACTGCGGATCAGGCGGTAAGTCGCAATCGTGAATT GGGTTTACGTGATGCAGCGCAGCAGCAGCAGATTAAAGATTCTGAGCGTAATTATGGCTTAGCTAAAGATCAGGTGGACT GGCGGAAAGAAACTGATGACCGGGATCACAAGTATAAAGCGCAGCGCGATAGCGCAAGTGATGAGCAGTGGAATAAAAAC TATGGTCTGGCGCAGGCAAATCAGCGTACAGCAAATGCGAGCCTTGGTCTCCGCGCCGAAGAAATCAATATGCGAAAGAA TGAGTTTAATTACCAGCGGTCACAAGCCGAGCGCCAGCAGCGAATGCAAGAAGAAATGCCCGTTGTTCAGACGCTGTATA AACAAATTGAAACGACGGGGCAGGTTGATCCTGAGCTGTTCGGGCAAATTTCAAAGGATAATCCACTTAACCCATCCCGT TTTTTTGGGCAGGAAGCCATCAACAATGTAATGGAAATTAACCAGATTATGCCGAAAGTGCTTTCTGGAGAGGTGAGCTA CAACGACCCTAAAGTTTTGAAGGCGATGAATACCGTACTGGCCCCTCACATCCAACGCAATATTGATGAAGTCGATCCGG AGTCTGGCAAGAAGATTAAGAGTAAGGAATTGGGTCACATTGGTATCAGTGAAGATGGTAAGTTTGTTATTCCCGGCCTG AAAGTCACTTATAGCGATGGCTCGACCGCCAATAAACCTATGACCCAGTTCGGTTCTGCTGATGTGAGTGATAACCAGGT AGCGAAAATCCCTATCGATCAGTTTATGAATCAGATACGTGGCTACGGACAGATGGTTGGGCAACTCAATCAGCCCGATC GAGCCAAGTTTATTGGCAGCATGGTTAACCCGCCGGATAAAGCTGCGATGCGTCAGGAGAGTGAAGGCTACCGCAAGGAG TTACTGGATATAGGCAAAGACGAAGGCAAACAATTGGCTGCGCTGAATAAAGATGGTGCAATGATGGATGAAAAACAATT ATCTTCGGCAAGGCAGGAAATTAAAAACAACTCTGAGCAACGCCGTCAGCAAGCCTCGGAACTCTATGGTGTTGGTGGGG GACGTAGTTCACAAAATCAACCAGGCATTGACCCTGCAGAGTTGGAAGCATTTGTGGGTGAATATCAAAAAGAATTTGGT GAAGCGCCGGACCTGAGTAGTCCACAAGATCAGCAATTCTTTATAGCGTGGAAGCAGAAGCAACTACAGCAAATGAAAGA ACACTCACCGAGTGCACAACCTGGTACAACTCAAAGTAATTCAGCTCTTGATAGCAATACAGCGCAGCAGCTAAGGGGAC TGAAGCGCATTAATGGATCCATACCACGATAA
Upstream 100 bases:
>100_bases GTTGGTGCGGGTACGGGTATGGCGATGGGTGGGCCGCTCGGGGCAGGAATAGGGGCGGCCGTAGGTTTGCTGGCGGGCAG TATTTTCTAAAGGAATTATC
Downstream 100 bases:
>100_bases CGCTGACAGGCACCCACGAATCAATAAGTAGGCTATGTCATTAATAAAAATTATATTTTATAAGGATAATATTAATGAAA ATGAATACTGAAGATACATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MGVQGLADGFLAGFNTADQAVSRNRELGLRDAAQQQQIKDSERNYGLAKDQVDWRKETDDRDHKYKAQRDSASDEQWNKN YGLAQANQRTANASLGLRAEEINMRKNEFNYQRSQAERQQRMQEEMPVVQTLYKQIETTGQVDPELFGQISKDNPLNPSR FFGQEAINNVMEINQIMPKVLSGEVSYNDPKVLKAMNTVLAPHIQRNIDEVDPESGKKIKSKELGHIGISEDGKFVIPGL KVTYSDGSTANKPMTQFGSADVSDNQVAKIPIDQFMNQIRGYGQMVGQLNQPDRAKFIGSMVNPPDKAAMRQESEGYRKE LLDIGKDEGKQLAALNKDGAMMDEKQLSSARQEIKNNSEQRRQQASELYGVGGGRSSQNQPGIDPAELEAFVGEYQKEFG EAPDLSSPQDQQFFIAWKQKQLQQMKEHSPSAQPGTTQSNSALDSNTAQQLRGLKRINGSIPR
Sequences:
>Translated_463_residues MGVQGLADGFLAGFNTADQAVSRNRELGLRDAAQQQQIKDSERNYGLAKDQVDWRKETDDRDHKYKAQRDSASDEQWNKN YGLAQANQRTANASLGLRAEEINMRKNEFNYQRSQAERQQRMQEEMPVVQTLYKQIETTGQVDPELFGQISKDNPLNPSR FFGQEAINNVMEINQIMPKVLSGEVSYNDPKVLKAMNTVLAPHIQRNIDEVDPESGKKIKSKELGHIGISEDGKFVIPGL KVTYSDGSTANKPMTQFGSADVSDNQVAKIPIDQFMNQIRGYGQMVGQLNQPDRAKFIGSMVNPPDKAAMRQESEGYRKE LLDIGKDEGKQLAALNKDGAMMDEKQLSSARQEIKNNSEQRRQQASELYGVGGGRSSQNQPGIDPAELEAFVGEYQKEFG EAPDLSSPQDQQFFIAWKQKQLQQMKEHSPSAQPGTTQSNSALDSNTAQQLRGLKRINGSIPR >Mature_462_residues GVQGLADGFLAGFNTADQAVSRNRELGLRDAAQQQQIKDSERNYGLAKDQVDWRKETDDRDHKYKAQRDSASDEQWNKNY GLAQANQRTANASLGLRAEEINMRKNEFNYQRSQAERQQRMQEEMPVVQTLYKQIETTGQVDPELFGQISKDNPLNPSRF FGQEAINNVMEINQIMPKVLSGEVSYNDPKVLKAMNTVLAPHIQRNIDEVDPESGKKIKSKELGHIGISEDGKFVIPGLK VTYSDGSTANKPMTQFGSADVSDNQVAKIPIDQFMNQIRGYGQMVGQLNQPDRAKFIGSMVNPPDKAAMRQESEGYRKEL LDIGKDEGKQLAALNKDGAMMDEKQLSSARQEIKNNSEQRRQQASELYGVGGGRSSQNQPGIDPAELEAFVGEYQKEFGE APDLSSPQDQQFFIAWKQKQLQQMKEHSPSAQPGTTQSNSALDSNTAQQLRGLKRINGSIPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51790; Mature: 51659
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVQGLADGFLAGFNTADQAVSRNRELGLRDAAQQQQIKDSERNYGLAKDQVDWRKETDD CCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC RDHKYKAQRDSASDEQWNKNYGLAQANQRTANASLGLRAEEINMRKNEFNYQRSQAERQQ HHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHH RMQEEMPVVQTLYKQIETTGQVDPELFGQISKDNPLNPSRFFGQEAINNVMEINQIMPKV HHHHHCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LSGEVSYNDPKVLKAMNTVLAPHIQRNIDEVDPESGKKIKSKELGHIGISEDGKFVIPGL HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEECCE KVTYSDGSTANKPMTQFGSADVSDNQVAKIPIDQFMNQIRGYGQMVGQLNQPDRAKFIGS EEEECCCCCCCCCHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MVNPPDKAAMRQESEGYRKELLDIGKDEGKQLAALNKDGAMMDEKQLSSARQEIKNNSEQ HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHCCCCCCCCCHHHHHHHHHHHHCCHHH RRQQASELYGVGGGRSSQNQPGIDPAELEAFVGEYQKEFGEAPDLSSPQDQQFFIAWKQK HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH QLQQMKEHSPSAQPGTTQSNSALDSNTAQQLRGLKRINGSIPR HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GVQGLADGFLAGFNTADQAVSRNRELGLRDAAQQQQIKDSERNYGLAKDQVDWRKETDD CCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC RDHKYKAQRDSASDEQWNKNYGLAQANQRTANASLGLRAEEINMRKNEFNYQRSQAERQQ HHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHH RMQEEMPVVQTLYKQIETTGQVDPELFGQISKDNPLNPSRFFGQEAINNVMEINQIMPKV HHHHHCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LSGEVSYNDPKVLKAMNTVLAPHIQRNIDEVDPESGKKIKSKELGHIGISEDGKFVIPGL HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEECCE KVTYSDGSTANKPMTQFGSADVSDNQVAKIPIDQFMNQIRGYGQMVGQLNQPDRAKFIGS EEEECCCCCCCCCHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MVNPPDKAAMRQESEGYRKELLDIGKDEGKQLAALNKDGAMMDEKQLSSARQEIKNNSEQ HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHCCCCCCCCCHHHHHHHHHHHHCCHHH RRQQASELYGVGGGRSSQNQPGIDPAELEAFVGEYQKEFGEAPDLSSPQDQQFFIAWKQK HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH QLQQMKEHSPSAQPGTTQSNSALDSNTAQQLRGLKRINGSIPR HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA