| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596113
Identifier: 51596113
GI number: 51596113
Start: 2130242
End: 2130580
Strand: Reverse
Name: 51596113
Synonym: YPTB1778
Alternate gene names: NA
Gene position: 2130580-2130242 (Counterclockwise)
Preceding gene: 51596114
Following gene: 51596112
Centisome position: 44.9
GC content: 42.77
Gene sequence:
>339_bases TTGAGCAAATTATTAAATATCAAGGATCAAGGTAGACCGGGGAACCGTCAAGTTAAACGCAGTCTTAAAAATGCTGCCCG TTCCCGCTATCACTACACAAAAGAAGAAGCATTAAAGGCTTTTATTTACCGCAAACAATATCAGTTAGAACGAATCCGGC TAACAAGCGAAACCGTGTCGCTTTGCCTTAAAGGGATAGGTGAGGCTGGTTTTGTTGAAATCAGTAAAGACGGTGAATTC AACAGTTTTAGCAACATTCTATCTGTTCCCGAAAAAGACTTTCGCGCGGCAGAAGAAGCTGGAGAAGTAGCCTCGACGTA TCGCTGGGGAGAATATTGA
Upstream 100 bases:
>100_bases GACTCGAAAGGCCGACCAATCGTAATGCTGTGGCAAATGGTAATTCTACGGGAGACAGAAAAGACATTTTGGTACTGCCC TGACTACCCGAACATGAGTC
Downstream 100 bases:
>100_bases TGAATAACATCGACGAAGAGACAGAACCATTTTTCATCTATGGAGATGACTTAACGGACATGGTTCTGACCGTACAACAG GCCGGAGAGGGGAATGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSKLLNIKDQGRPGNRQVKRSLKNAARSRYHYTKEEALKAFIYRKQYQLERIRLTSETVSLCLKGIGEAGFVEISKDGEF NSFSNILSVPEKDFRAAEEAGEVASTYRWGEY
Sequences:
>Translated_112_residues MSKLLNIKDQGRPGNRQVKRSLKNAARSRYHYTKEEALKAFIYRKQYQLERIRLTSETVSLCLKGIGEAGFVEISKDGEF NSFSNILSVPEKDFRAAEEAGEVASTYRWGEY >Mature_111_residues SKLLNIKDQGRPGNRQVKRSLKNAARSRYHYTKEEALKAFIYRKQYQLERIRLTSETVSLCLKGIGEAGFVEISKDGEFN SFSNILSVPEKDFRAAEEAGEVASTYRWGEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12871; Mature: 12739
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLLNIKDQGRPGNRQVKRSLKNAARSRYHYTKEEALKAFIYRKQYQLERIRLTSETVS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LCLKGIGEAGFVEISKDGEFNSFSNILSVPEKDFRAAEEAGEVASTYRWGEY HHHHHCCCCCEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKLLNIKDQGRPGNRQVKRSLKNAARSRYHYTKEEALKAFIYRKQYQLERIRLTSETVS CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LCLKGIGEAGFVEISKDGEFNSFSNILSVPEKDFRAAEEAGEVASTYRWGEY HHHHHCCCCCEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA