| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596096
Identifier: 51596096
GI number: 51596096
Start: 2113301
End: 2114155
Strand: Reverse
Name: 51596096
Synonym: YPTB1761
Alternate gene names: NA
Gene position: 2114155-2113301 (Counterclockwise)
Preceding gene: 51596100
Following gene: 51596095
Centisome position: 44.56
GC content: 51.93
Gene sequence:
>855_bases ATGGCTAAGAAAGTGTCTAAGTATTTCCGTATCGGCGTTGAGGGTGACACCTGTGACGGGCGGAAGATTGAAGCCGACGA TATCAACCAAATGGCCGAGTCATTTGACCCGCGCGTGTACGGTTGCCGCATCAATCTGGAGCATTTGACCAGCTACTTCC CGGACAGCACCTTCCGCCGGTACGGTGACGTGATCGGACTGAAAGCGGAAACCATTGAAGACGACTCTATCCTGAACGGC AAGCGTGCACTGTTCGCGCAAATTAGCCCCACCGATGATTTGGTGTTGATGAATAAAGACCGTCAGAAAATCTACACCTC TATGGAGATCCGCCCAAACTTTGCCAATACCGGTAAAGCTTATCTGGTCGGTCTGGCGGTGACCGATGACCCCGCCAGCC TTGGGACTGAAATTCTGGAATTCAGCGCCAAGGCCAAACACAACCCACTGGCCTCCCGTAAATCTCACCCGGATAACCTG TTTTCTGCAGCGGTTGAAGTGCAACTGGAATTTGAAGACGTGGCCGAGCCGGGTGTCAGCTTACTTGGCATTGTGAAATC GGTATTCAGTCGTAAACAGGCAACCGACGACGCCCGTTTTAATGATGTGCATGAGGCGGTGAATGCCGTGGCAGTGCATG TGCAGGAACAGGGAGAAACCATTGAAGCCCGCTTTGCCATCATTGAGAAACAACTTACTGACCACGTTGTGGAGCTGAAG CAGAGCATCAAACAGGGCAAACAAGGGGTAACTGACCTCGAAAATAAACTTTCTTCCACTGAGAACTTTGGTCAGTCAAA GCGCCCGGAAGCCACCGGCGGCAACAACCAGAACGATGTATTGACCGACTGCTAG
Upstream 100 bases:
>100_bases GTGCCAGCCCCGTCACAACTGGCTTTCGTTGTTGCTGCCGCCATACATCAGGAGACTAAGCCCCGAACGAACAACCCTAA TCACATGAATGGAGCCACAC
Downstream 100 bases:
>100_bases TTGGGATTAATGGCCGCCTGCAGTGCGGTCCGCTTGTTATTTCATTAACACGTTATTTAACTGAATCAGGATTATTATGC GCCCAGCAACCCGTTTTAAA
Product: V protein bacteriophage 186
Products: NA
Alternate protein names: Capsid Scaffolding; Capsid Scaffolding Protein; Phage Capsid Scaffolding; Capsid Scaffolding Protein O; Phage Capsid Scaffolding Protein GpO; Phage-Related Capsid Scaffolding Protein; Scaffold; V Protein Bacteriophage; Capsid Protein; Presumed Capsid Scaffolding Protein; Capsid Scafolding Protein; Scaffold Protein; Phage-Related Capsid Scaffold Protein; Phage-Related Capsid Scaffold Bacteriophage Protein; Presumed Capsid-Scaffolding Protein; Phage P2 Capsid Scaffolding GpO-Like Protein; Capsid Scaffolding Protein Bacteriophage Origin; Bacteriophage Protein; Bacteriophage P2 GPO Capsid Protein; Prophage Capsid Scaffolding Protein; Flagellar Biosynthesis/Type III Secretory Pathway Protein
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MAKKVSKYFRIGVEGDTCDGRKIEADDINQMAESFDPRVYGCRINLEHLTSYFPDSTFRRYGDVIGLKAETIEDDSILNG KRALFAQISPTDDLVLMNKDRQKIYTSMEIRPNFANTGKAYLVGLAVTDDPASLGTEILEFSAKAKHNPLASRKSHPDNL FSAAVEVQLEFEDVAEPGVSLLGIVKSVFSRKQATDDARFNDVHEAVNAVAVHVQEQGETIEARFAIIEKQLTDHVVELK QSIKQGKQGVTDLENKLSSTENFGQSKRPEATGGNNQNDVLTDC
Sequences:
>Translated_284_residues MAKKVSKYFRIGVEGDTCDGRKIEADDINQMAESFDPRVYGCRINLEHLTSYFPDSTFRRYGDVIGLKAETIEDDSILNG KRALFAQISPTDDLVLMNKDRQKIYTSMEIRPNFANTGKAYLVGLAVTDDPASLGTEILEFSAKAKHNPLASRKSHPDNL FSAAVEVQLEFEDVAEPGVSLLGIVKSVFSRKQATDDARFNDVHEAVNAVAVHVQEQGETIEARFAIIEKQLTDHVVELK QSIKQGKQGVTDLENKLSSTENFGQSKRPEATGGNNQNDVLTDC >Mature_283_residues AKKVSKYFRIGVEGDTCDGRKIEADDINQMAESFDPRVYGCRINLEHLTSYFPDSTFRRYGDVIGLKAETIEDDSILNGK RALFAQISPTDDLVLMNKDRQKIYTSMEIRPNFANTGKAYLVGLAVTDDPASLGTEILEFSAKAKHNPLASRKSHPDNLF SAAVEVQLEFEDVAEPGVSLLGIVKSVFSRKQATDDARFNDVHEAVNAVAVHVQEQGETIEARFAIIEKQLTDHVVELKQ SIKQGKQGVTDLENKLSSTENFGQSKRPEATGGNNQNDVLTDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31429; Mature: 31298
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKVSKYFRIGVEGDTCDGRKIEADDINQMAESFDPRVYGCRINLEHLTSYFPDSTFRR CCCHHHHHHEECCCCCCCCCCEECHHHHHHHHHHCCCCEEEEEEEHHHHHHHCCCHHHHH YGDVIGLKAETIEDDSILNGKRALFAQISPTDDLVLMNKDRQKIYTSMEIRPNFANTGKA HCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCHHHHHHHEEECCCCCCCCCE YLVGLAVTDDPASLGTEILEFSAKAKHNPLASRKSHPDNLFSAAVEVQLEFEDVAEPGVS EEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEEEEEHHHHCCCCHH LLGIVKSVFSRKQATDDARFNDVHEAVNAVAVHVQEQGETIEARFAIIEKQLTDHVVELK HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHH QSIKQGKQGVTDLENKLSSTENFGQSKRPEATGGNNQNDVLTDC HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AKKVSKYFRIGVEGDTCDGRKIEADDINQMAESFDPRVYGCRINLEHLTSYFPDSTFRR CCHHHHHHEECCCCCCCCCCEECHHHHHHHHHHCCCCEEEEEEEHHHHHHHCCCHHHHH YGDVIGLKAETIEDDSILNGKRALFAQISPTDDLVLMNKDRQKIYTSMEIRPNFANTGKA HCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCHHHHHHHEEECCCCCCCCCE YLVGLAVTDDPASLGTEILEFSAKAKHNPLASRKSHPDNLFSAAVEVQLEFEDVAEPGVS EEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEEEEEHHHHCCCCHH LLGIVKSVFSRKQATDDARFNDVHEAVNAVAVHVQEQGETIEARFAIIEKQLTDHVVELK HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHH QSIKQGKQGVTDLENKLSSTENFGQSKRPEATGGNNQNDVLTDC HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA