| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596084
Identifier: 51596084
GI number: 51596084
Start: 2106455
End: 2107363
Strand: Reverse
Name: 51596084
Synonym: YPTB1749
Alternate gene names: NA
Gene position: 2107363-2106455 (Counterclockwise)
Preceding gene: 51596085
Following gene: 51596083
Centisome position: 44.42
GC content: 59.96
Gene sequence:
>909_bases ATGGCAACCATTGACCTGAGCCTGTTACCGCCGCCGTTTGTGGTGGAAGAACTGGATTATGAAACCTTGCTGGCCGAGCG CAAAGCGACGCTGATGTCTCTTTACCCGGAGGAACAGCGCGCCGCCGTGGCCCGTACCCTGTCGCTGGAATCTGAGCCAC TGGTCAAGCTGTTGCAGGAAAACGCCTACCGTGAAGTGATCTTGCGCCAACGCGTCAATGATGCCGCCCGCGCGGTGATG GTGGCCTATGCCGTCGGCAGTGACTTAGACCAGCTCGGCGCAAATAACAATGTTGAGCGATTGGTGATCACCCCGGCAGA CCCCACCGCGATTCCACCAATTGAGGCAGTGATGGAATCGGACAGTGATTTCCGCGTGCGTATCCCGCAAGCCTTTGAGG GCTTGAGCGTCGCCGGGCCAACCGGGGCTTATGAATATCACGCCAAAAGCGCTGACGGCCGGGTGGCCGATGCCTCGGCA ATCAGTCCGACCCCGGCCTGTGTCACCGTCACGGTGTTGTCGCGGGAGGGTAACGGCGCAGCATCAAGCGAACTGTTGGC GGTGGTGGAAGCCGCGCTCAATGATGAGAACACACGACCAGTGGCTGACCGGGTGACAGTGCAATCCGCCCGTATTGAAG ATTATGAGATTGACGCGGTGCTCTATCTGCATCCGGGGCCAGAGGCGGAGCCAATCCGCGCGGCAGCCGAAAAGAAACTG AACGCCTTTGTTACCGCACAGCGCCGCCTTGGCCGCGACATTCGCCTGTCGGCACTGTATGCCGCGCTGCATATCGAGGG TGTCCAGCGGGCGGTGATTAATGCCCCGATAGCTGATGTGGTGCTGGATAAAACCCAAGCCGCATTCTGCACCGGCAGCG CCATCACGGTTGGGGGTACAGATGACTGA
Upstream 100 bases:
>100_bases TTTGAAACCACCTTTGACGGAAAAATGGTGGTTGATATCACTGGCACCCGCAGCGATAGCGCGGCCCCTTTTTCTTTAAC TATTCCTGTGAGCTGACCCT
Downstream 100 bases:
>100_bases CCGTTTATTGCCAGTCGGTTCCTCGGTACTGGAAGTGGCCGCCGCCCGCGCCTGTGCCGAACTGGAAAATACCCCGGTTC CGATTCGCCAGCTCTGGAAC
Product: bacteriophage protein
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Baseplate J-Like Protein; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Bacteriophage Baseplate Assembly Protein; Bacteriophage Tail Fiber Protein; Phage Protein Gp; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate Protein; Phage Baseplate J-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Prophage LambdaW5 Baseplate Assembly Protein J; Baseplate Assembly Protein GpJ; Baseplate Assembly Protein J Prophage; Baseplate Assembly-Like Protein; Baseplate Assembly Protein; Bacteriophage Baseplate Protein; Baseplate Protein Putative Phage Associated Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Baseplate Assembly; Phage Tail Protein; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Baseplate-Like Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MATIDLSLLPPPFVVEELDYETLLAERKATLMSLYPEEQRAAVARTLSLESEPLVKLLQENAYREVILRQRVNDAARAVM VAYAVGSDLDQLGANNNVERLVITPADPTAIPPIEAVMESDSDFRVRIPQAFEGLSVAGPTGAYEYHAKSADGRVADASA ISPTPACVTVTVLSREGNGAASSELLAVVEAALNDENTRPVADRVTVQSARIEDYEIDAVLYLHPGPEAEPIRAAAEKKL NAFVTAQRRLGRDIRLSALYAALHIEGVQRAVINAPIADVVLDKTQAAFCTGSAITVGGTDD
Sequences:
>Translated_302_residues MATIDLSLLPPPFVVEELDYETLLAERKATLMSLYPEEQRAAVARTLSLESEPLVKLLQENAYREVILRQRVNDAARAVM VAYAVGSDLDQLGANNNVERLVITPADPTAIPPIEAVMESDSDFRVRIPQAFEGLSVAGPTGAYEYHAKSADGRVADASA ISPTPACVTVTVLSREGNGAASSELLAVVEAALNDENTRPVADRVTVQSARIEDYEIDAVLYLHPGPEAEPIRAAAEKKL NAFVTAQRRLGRDIRLSALYAALHIEGVQRAVINAPIADVVLDKTQAAFCTGSAITVGGTDD >Mature_301_residues ATIDLSLLPPPFVVEELDYETLLAERKATLMSLYPEEQRAAVARTLSLESEPLVKLLQENAYREVILRQRVNDAARAVMV AYAVGSDLDQLGANNNVERLVITPADPTAIPPIEAVMESDSDFRVRIPQAFEGLSVAGPTGAYEYHAKSADGRVADASAI SPTPACVTVTVLSREGNGAASSELLAVVEAALNDENTRPVADRVTVQSARIEDYEIDAVLYLHPGPEAEPIRAAAEKKLN AFVTAQRRLGRDIRLSALYAALHIEGVQRAVINAPIADVVLDKTQAAFCTGSAITVGGTDD
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32347; Mature: 32216
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIDLSLLPPPFVVEELDYETLLAERKATLMSLYPEEQRAAVARTLSLESEPLVKLLQE CCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH NAYREVILRQRVNDAARAVMVAYAVGSDLDQLGANNNVERLVITPADPTAIPPIEAVMES HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEECCCCCCCCCHHHHHCC DSDFRVRIPQAFEGLSVAGPTGAYEYHAKSADGRVADASAISPTPACVTVTVLSREGNGA CCCEEEECCHHHCCCCCCCCCCCEEEECCCCCCCEECCCCCCCCCCEEEEEEEEECCCCC ASSELLAVVEAALNDENTRPVADRVTVQSARIEDYEIDAVLYLHPGPEAEPIRAAAEKKL HHHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHH NAFVTAQRRLGRDIRLSALYAALHIEGVQRAVINAPIADVVLDKTQAAFCTGSAITVGGT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHEECCCEEEECCC DD CC >Mature Secondary Structure ATIDLSLLPPPFVVEELDYETLLAERKATLMSLYPEEQRAAVARTLSLESEPLVKLLQE CEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH NAYREVILRQRVNDAARAVMVAYAVGSDLDQLGANNNVERLVITPADPTAIPPIEAVMES HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEECCCCCCCCCHHHHHCC DSDFRVRIPQAFEGLSVAGPTGAYEYHAKSADGRVADASAISPTPACVTVTVLSREGNGA CCCEEEECCHHHCCCCCCCCCCCEEEECCCCCCCEECCCCCCCCCCEEEEEEEEECCCCC ASSELLAVVEAALNDENTRPVADRVTVQSARIEDYEIDAVLYLHPGPEAEPIRAAAEKKL HHHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHH NAFVTAQRRLGRDIRLSALYAALHIEGVQRAVINAPIADVVLDKTQAAFCTGSAITVGGT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHEECCCEEEECCC DD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA