| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is ogrK
Identifier: 51596073
GI number: 51596073
Start: 2097207
End: 2097422
Strand: Reverse
Name: ogrK
Synonym: YPTB1738
Alternate gene names: 51596073
Gene position: 2097422-2097207 (Counterclockwise)
Preceding gene: 51596074
Following gene: 51596069
Centisome position: 44.21
GC content: 44.91
Gene sequence:
>216_bases ATGATGCATTGCCCACGCTGTAAATTTGCAGCACACGCGAGATCCAGCCGTTACCTTAGTGACGAAACGAAAGAACGCTA TCACCAGTGCACAAATATTAATTGTGGCAAAACCTTTAAGACCCATGAAACTATCGTTGATACGATAATGGAACCGGGAA TAATTAATGCTGTCCCGCCCCACCCTAAAGGGAATCAAGGCGTGTTGTGGATGTAA
Upstream 100 bases:
>100_bases ACAGAGTAGCTATATTCAACTAATTGATATTTAGTTCACAAATCCGAATACTGGTGATAAGATCAGCATAATTACTGAAT ATGCAGTTTCGGAGGTAAAC
Downstream 100 bases:
>100_bases TTGAAGAAGCCTGCAAATTGCAGGTTTTTTTATATCAAAATTCTGTGTAATTAATATTTTGTTGGGGGATAACTAACTGT TTATCGTACTTGCTACTGGA
Product: DNA-binding transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MMHCPRCKFAAHARSSRYLSDETKERYHQCTNINCGKTFKTHETIVDTIMEPGIINAVPPHPKGNQGVLWM
Sequences:
>Translated_71_residues MMHCPRCKFAAHARSSRYLSDETKERYHQCTNINCGKTFKTHETIVDTIMEPGIINAVPPHPKGNQGVLWM >Mature_71_residues MMHCPRCKFAAHARSSRYLSDETKERYHQCTNINCGKTFKTHETIVDTIMEPGIINAVPPHPKGNQGVLWM
Specific function: Cryptic version of the phage P2 OGR protein which acts as an activator of P2 late transcription [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788398, Length=72, Percent_Identity=54.1666666666667, Blast_Score=91, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007684 [H]
Pfam domain/function: PF04606 Ogr_Delta [H]
EC number: NA
Molecular weight: Translated: 8128; Mature: 8128
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 11.3 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 11.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMHCPRCKFAAHARSSRYLSDETKERYHQCTNINCGKTFKTHETIVDTIMEPGIINAVPP CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC HPKGNQGVLWM CCCCCCCCCCC >Mature Secondary Structure MMHCPRCKFAAHARSSRYLSDETKERYHQCTNINCGKTFKTHETIVDTIMEPGIINAVPP CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC HPKGNQGVLWM CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1597424; 1597423; 9097040; 9278503 [H]