| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is 51595868
Identifier: 51595868
GI number: 51595868
Start: 1840695
End: 1841948
Strand: Reverse
Name: 51595868
Synonym: YPTB1531
Alternate gene names: NA
Gene position: 1841948-1840695 (Counterclockwise)
Preceding gene: 51595869
Following gene: 51595867
Centisome position: 38.82
GC content: 48.48
Gene sequence:
>1254_bases ATGGCAACACAAGGTTCCTTGCCGATACCTGAATACAGCCGCAATATGCGGCTGATTGGTCACAGTGACCAAGGTGGCAA ACCAGACGGTGTACAAGTTATGGTGCATAGGGGCTATGCCTATGTCGGCCATATGGTATCGAAAGGCGTATCAATTATTG ACGTAAGGGATGCCAAAAACCCGCGTCCCGCAGGTTTCATCGCTGCGCCTCCGAATACCTGGAATGTGCATCTGCAAACT CATGATGATCTGCTGCTGGTGATTAATGCACGCGACCTATTTGCCGATGCCCGTTTTGCCGAAGAGAAAGTCTATTACAC CCGTTCAGTCGCCGAAACAGTCAGCACGCGTCAGGAAGGCCGCAATTGGAGCGCGGGTTTACGTATTTTTGATATTTCAA CGCCAGACAAGCCACGAGAAATCAGTTTCTTACCGCTTGATGGCATTGGTATCCATCGAATCTGGTATGTCGGTGGGCGT TGGGCGTATGTATCGGCACTGTTAGATGGTTATAGCGATTATATCTTCCTCACCATTGATCTGGCTGATCCGCAAAAGCC ACAGGTTGCCGGGCGCTATGCGTTACCTGGTATGGATACTGCGGCAGGTGAACAGCCTAACTGGCCAGCAGGCAAACGCT ATGCGCTGCATCATGCCATTATTAGTGGCGATACCGCTTACGGCAGTTGGCGTGATGGTGGCCTAACCTTATTGGATGTC AGTGATCGTCACGAACCGAAACTAATAAGCCACCGTAATTGGAGCCCCCCCTTTGGCGGCGGTACTCATACTGCTTTGCC ACTCCCTGATCGTGATTTATTGGTAGTACTGGATGAGGCCGTGCTGGATAACCAAGAAGATGGCGAGAAACATATCTGGG TGTTTGATATTCGTGAACCAAGTAACCCGGTGAGTATTTCAACGTTTCCGGTTCCGGAAGAACGAGATTATATAAAAAAA GGCGCTCATTTTGGCCCACACAATCTGCATGAAAACCGCCCAGGTAGTTTTATCAGTTCATCTCTAATTTTTGCTACTTA CCAAAATGCTGGGGTCCGAGCTTACGATATCAGTAACCCCTATCATCCAAAAGAAACTGGCGCGTTAGTTCCAGCAGCCC CCGAAAAAATGATGGATAAGCGCCCTGGTCGCCCACAAATTATTCAATCATGTGATGTATTTGTTGACACTCAAGGCATC ATCTACAGTACCGATTATAACGGCGGCCTCTCTATCATCGAATATTTAGGTTAA
Upstream 100 bases:
>100_bases GTAAGATTATCCCCGGTTGGGGTCAGTCTGATGATTTCAACTCTCCTTGGTTTGCGACCCTTGCAGCCCAAAATGGTCAA TAGATTTGGAGTAAGTATTG
Downstream 100 bases:
>100_bases CTATCAATCACCCAAGTTAACCATCAAGTAGTTTGGATGTTTATTAACCACTTAGGTTGATCGTAAACTCCTTGAGCTAA CCAGAAAATACTTGGATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MATQGSLPIPEYSRNMRLIGHSDQGGKPDGVQVMVHRGYAYVGHMVSKGVSIIDVRDAKNPRPAGFIAAPPNTWNVHLQT HDDLLLVINARDLFADARFAEEKVYYTRSVAETVSTRQEGRNWSAGLRIFDISTPDKPREISFLPLDGIGIHRIWYVGGR WAYVSALLDGYSDYIFLTIDLADPQKPQVAGRYALPGMDTAAGEQPNWPAGKRYALHHAIISGDTAYGSWRDGGLTLLDV SDRHEPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKHIWVFDIREPSNPVSISTFPVPEERDYIKK GAHFGPHNLHENRPGSFISSSLIFATYQNAGVRAYDISNPYHPKETGALVPAAPEKMMDKRPGRPQIIQSCDVFVDTQGI IYSTDYNGGLSIIEYLG
Sequences:
>Translated_417_residues MATQGSLPIPEYSRNMRLIGHSDQGGKPDGVQVMVHRGYAYVGHMVSKGVSIIDVRDAKNPRPAGFIAAPPNTWNVHLQT HDDLLLVINARDLFADARFAEEKVYYTRSVAETVSTRQEGRNWSAGLRIFDISTPDKPREISFLPLDGIGIHRIWYVGGR WAYVSALLDGYSDYIFLTIDLADPQKPQVAGRYALPGMDTAAGEQPNWPAGKRYALHHAIISGDTAYGSWRDGGLTLLDV SDRHEPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKHIWVFDIREPSNPVSISTFPVPEERDYIKK GAHFGPHNLHENRPGSFISSSLIFATYQNAGVRAYDISNPYHPKETGALVPAAPEKMMDKRPGRPQIIQSCDVFVDTQGI IYSTDYNGGLSIIEYLG >Mature_416_residues ATQGSLPIPEYSRNMRLIGHSDQGGKPDGVQVMVHRGYAYVGHMVSKGVSIIDVRDAKNPRPAGFIAAPPNTWNVHLQTH DDLLLVINARDLFADARFAEEKVYYTRSVAETVSTRQEGRNWSAGLRIFDISTPDKPREISFLPLDGIGIHRIWYVGGRW AYVSALLDGYSDYIFLTIDLADPQKPQVAGRYALPGMDTAAGEQPNWPAGKRYALHHAIISGDTAYGSWRDGGLTLLDVS DRHEPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKHIWVFDIREPSNPVSISTFPVPEERDYIKKG AHFGPHNLHENRPGSFISSSLIFATYQNAGVRAYDISNPYHPKETGALVPAAPEKMMDKRPGRPQIIQSCDVFVDTQGII YSTDYNGGLSIIEYLG
Specific function: Unknown
COG id: COG5276
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46266; Mature: 46134
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQGSLPIPEYSRNMRLIGHSDQGGKPDGVQVMVHRGYAYVGHMVSKGVSIIDVRDAKN CCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCC PRPAGFIAAPPNTWNVHLQTHDDLLLVINARDLFADARFAEEKVYYTRSVAETVSTRQEG CCCCEEEECCCCCEEEEEEECCCEEEEEECHHHHHHHHHHHHHHEEHHHHHHHHHHHHCC RNWSAGLRIFDISTPDKPREISFLPLDGIGIHRIWYVGGRWAYVSALLDGYSDYIFLTID CCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCEEEEEEE LADPQKPQVAGRYALPGMDTAAGEQPNWPAGKRYALHHAIISGDTAYGSWRDGGLTLLDV CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEC SDRHEPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKHIWVFDIREP CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEEEEEECCC SNPVSISTFPVPEERDYIKKGAHFGPHNLHENRPGSFISSSLIFATYQNAGVRAYDISNP CCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHCEEEEEEECCCCEEEEECCCC YHPKETGALVPAAPEKMMDKRPGRPQIIQSCDVFVDTQGIIYSTDYNGGLSIIEYLG CCCHHCCEECCCCCHHHHHCCCCCCHHHHCCCEEEECCCEEEEECCCCCHHHHHHCC >Mature Secondary Structure ATQGSLPIPEYSRNMRLIGHSDQGGKPDGVQVMVHRGYAYVGHMVSKGVSIIDVRDAKN CCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCC PRPAGFIAAPPNTWNVHLQTHDDLLLVINARDLFADARFAEEKVYYTRSVAETVSTRQEG CCCCEEEECCCCCEEEEEEECCCEEEEEECHHHHHHHHHHHHHHEEHHHHHHHHHHHHCC RNWSAGLRIFDISTPDKPREISFLPLDGIGIHRIWYVGGRWAYVSALLDGYSDYIFLTID CCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCEEEEEEE LADPQKPQVAGRYALPGMDTAAGEQPNWPAGKRYALHHAIISGDTAYGSWRDGGLTLLDV CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEC SDRHEPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKHIWVFDIREP CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEEEEEECCC SNPVSISTFPVPEERDYIKKGAHFGPHNLHENRPGSFISSSLIFATYQNAGVRAYDISNP CCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHCEEEEEEECCCCEEEEECCCC YHPKETGALVPAAPEKMMDKRPGRPQIIQSCDVFVDTQGIIYSTDYNGGLSIIEYLG CCCHHCCEECCCCCHHHHHCCCCCCHHHHCCCEEEECCCEEEEECCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA