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The map label for this gene is 51595839

Identifier: 51595839

GI number: 51595839

Start: 1804036

End: 1805799

Strand: Direct

Name: 51595839

Synonym: YPTB1502

Alternate gene names: NA

Gene position: 1804036-1805799 (Clockwise)

Preceding gene: 51595838

Following gene: 51595840

Centisome position: 38.02

GC content: 57.65

Gene sequence:

>1764_bases
ATGGACGACTTAACCCTGCGTTATTTTGACGCTGAAATGCGCTACCTGCGTGAAGCGGGCGAAGAGTTTGCCCGCGCGCA
CCCTGATCGGGCTGCCGGATTAAATCTGGATAAAGCCGGGGCGCGTGACCCCTATGTCGAACGCCTATTTGAAGGCTTTG
CCTTTCTGATGGGCCGACTGCGGGAAAAACTGGATGACGACCTGCCGGAACTGACCGAAGGGTTGGTCAGCCTGCTGTGG
CCGCACTACCTGCGTACCATTCCGTCGCTTTCTATTGTGGAGTTCACCCCACAATGGCAGGAGATGAAAGAGCGCATGGG
GGTGAGTAAAGGTTTTGAAGTGCTGTCCCGCCCCATTGGTGAACGTGAAACCCGCTGCCGCTATACCACCACGCAAGATA
TGGACCTGCTCCCGCTGACCCTGCGCCGTGCCGGGCTGGACAGTGAACCCGATGGCCGGTCGGTTATCCGGCTGCGCTTT
GATTGCAGCGCGCTGGCCGACTGGAGCCGTATCAACCTGAGCCGCCTGCCGCTCTATTTTGATGCCGATGCGCCGCTGGC
CTGCGCCCTGCATGAGGCGCTGACCCTGAATACCGCCAAACTCTGGATCCGTTTGCCGGGGCAGGCTGATCGCCAGCCGC
TGGACGGCTATTTCGCGCCGCTGGGGTTCGGGGAGCAGGATACACTGTGGCCGAAGGCCGACAGTGCGTTCAGTGGTTAT
CAGCTCTTGCTGGAGTACTTTACCTTCCGCGAAAAGTTTATGTTTGTCGCGTTGCAGGGGCTGGATGGGATCGAGCTGCC
GGCGGAACTGCCGTGGTTTGAGATTGATGTGGTGCTGGAAAAACGCTGGCAACATGATTTTTCGTTCTCCGAAAAGAACC
TGCGCCTGCATTGTGTGCCGGTGATTAACCTGTTCCCGCTGGAATCGGACCCACTGTCGCTCTCTTCATTACAGACCGAA
TACCTGCTGCGCCCAATGCGCATTCAGGACGGTTATACCGAAGTGTATTCGGTGGACTCGGTGATCTCCTCCCGTCATAC
CGGGCATCAGGTCTATGTCCCGTTCACCAGCTTTCGCCACAAGGGGGGGATGTTGCGCCATGATGCGCCGGAGTATTACT
ACCATACGCGGGTCAAACGCGGGCCTTCGGGGTTACACGATACCTGGCTGGTGCTGGGGGGCGAGGCGTTTGATAACCAC
AGCGTACCGGATAATGAAAATTTGTCGCTGAGCCTGACCGGCACCAACGGGCAGTTACCGCGTAAAGCGCTGCAAAGCAC
GGTGCTGGATACGGCGGTGAAATCCACCGGGGCTCAGGTGCGGGTACGTAATCTCTCCGCGCCGTCATTGCCATGCTACC
CGCCGAACCGCGACCGTTTTCACTGGCGGGTACTGAGCCATCTGGGCAGCAGTTTTCTGTGGATGATGGATAACGCCGAA
GTGCTGCGCGGCACGCTGGCGCTGTATGACTGGACGGACAACGAAATGAACCGCCGTCGGTTGGAGGCGATCGCCGAGGT
CAAACACAGCGAGATTGAACGCTTTGAGCGGGGCTATTTGCTGCGCGGGGTGCACATTGAAATCACCCTCGACAGCAACG
GCTTTACCGGTACCGGCGATATTTGTCTGTTTGGGGAAATGCTCAGTCGCTTCTTTGCCCTGTATACCGATATTCACCTG
TTTAATCGTCTGACTCTGATACTGCAACCGACAGGAGAACGTTTGGAATGGGAAGAGAATCATCAGTCCCGCCTTCCCGG
CTAA

Upstream 100 bases:

>100_bases
TTATCTTTTTTAAAGGCATTATTAGAGTGGATTAATTCTCCGAAATTAAGCCATTCTTTATCTGATTAGTTTCTATTTTA
TTCGTTTCACTGAGAACCCT

Downstream 100 bases:

>100_bases
TCACCCGGCTTAAGCGCGATATCGGCCAGATCAATTTTTACCGTTTCTGTCAGTTGCTGGAGCAACAACCGGGAACCTTG
CCGCTGGGCAGTACCAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Protein ImpG/VasA; Type VI Secretion

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MDDLTLRYFDAEMRYLREAGEEFARAHPDRAAGLNLDKAGARDPYVERLFEGFAFLMGRLREKLDDDLPELTEGLVSLLW
PHYLRTIPSLSIVEFTPQWQEMKERMGVSKGFEVLSRPIGERETRCRYTTTQDMDLLPLTLRRAGLDSEPDGRSVIRLRF
DCSALADWSRINLSRLPLYFDADAPLACALHEALTLNTAKLWIRLPGQADRQPLDGYFAPLGFGEQDTLWPKADSAFSGY
QLLLEYFTFREKFMFVALQGLDGIELPAELPWFEIDVVLEKRWQHDFSFSEKNLRLHCVPVINLFPLESDPLSLSSLQTE
YLLRPMRIQDGYTEVYSVDSVISSRHTGHQVYVPFTSFRHKGGMLRHDAPEYYYHTRVKRGPSGLHDTWLVLGGEAFDNH
SVPDNENLSLSLTGTNGQLPRKALQSTVLDTAVKSTGAQVRVRNLSAPSLPCYPPNRDRFHWRVLSHLGSSFLWMMDNAE
VLRGTLALYDWTDNEMNRRRLEAIAEVKHSEIERFERGYLLRGVHIEITLDSNGFTGTGDICLFGEMLSRFFALYTDIHL
FNRLTLILQPTGERLEWEENHQSRLPG

Sequences:

>Translated_587_residues
MDDLTLRYFDAEMRYLREAGEEFARAHPDRAAGLNLDKAGARDPYVERLFEGFAFLMGRLREKLDDDLPELTEGLVSLLW
PHYLRTIPSLSIVEFTPQWQEMKERMGVSKGFEVLSRPIGERETRCRYTTTQDMDLLPLTLRRAGLDSEPDGRSVIRLRF
DCSALADWSRINLSRLPLYFDADAPLACALHEALTLNTAKLWIRLPGQADRQPLDGYFAPLGFGEQDTLWPKADSAFSGY
QLLLEYFTFREKFMFVALQGLDGIELPAELPWFEIDVVLEKRWQHDFSFSEKNLRLHCVPVINLFPLESDPLSLSSLQTE
YLLRPMRIQDGYTEVYSVDSVISSRHTGHQVYVPFTSFRHKGGMLRHDAPEYYYHTRVKRGPSGLHDTWLVLGGEAFDNH
SVPDNENLSLSLTGTNGQLPRKALQSTVLDTAVKSTGAQVRVRNLSAPSLPCYPPNRDRFHWRVLSHLGSSFLWMMDNAE
VLRGTLALYDWTDNEMNRRRLEAIAEVKHSEIERFERGYLLRGVHIEITLDSNGFTGTGDICLFGEMLSRFFALYTDIHL
FNRLTLILQPTGERLEWEENHQSRLPG
>Mature_587_residues
MDDLTLRYFDAEMRYLREAGEEFARAHPDRAAGLNLDKAGARDPYVERLFEGFAFLMGRLREKLDDDLPELTEGLVSLLW
PHYLRTIPSLSIVEFTPQWQEMKERMGVSKGFEVLSRPIGERETRCRYTTTQDMDLLPLTLRRAGLDSEPDGRSVIRLRF
DCSALADWSRINLSRLPLYFDADAPLACALHEALTLNTAKLWIRLPGQADRQPLDGYFAPLGFGEQDTLWPKADSAFSGY
QLLLEYFTFREKFMFVALQGLDGIELPAELPWFEIDVVLEKRWQHDFSFSEKNLRLHCVPVINLFPLESDPLSLSSLQTE
YLLRPMRIQDGYTEVYSVDSVISSRHTGHQVYVPFTSFRHKGGMLRHDAPEYYYHTRVKRGPSGLHDTWLVLGGEAFDNH
SVPDNENLSLSLTGTNGQLPRKALQSTVLDTAVKSTGAQVRVRNLSAPSLPCYPPNRDRFHWRVLSHLGSSFLWMMDNAE
VLRGTLALYDWTDNEMNRRRLEAIAEVKHSEIERFERGYLLRGVHIEITLDSNGFTGTGDICLFGEMLSRFFALYTDIHL
FNRLTLILQPTGERLEWEENHQSRLPG

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67503; Mature: 67503

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDLTLRYFDAEMRYLREAGEEFARAHPDRAAGLNLDKAGARDPYVERLFEGFAFLMGRL
CCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
REKLDDDLPELTEGLVSLLWPHYLRTIPSLSIVEFTPQWQEMKERMGVSKGFEVLSRPIG
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCHHHHHHHHHCCCC
ERETRCRYTTTQDMDLLPLTLRRAGLDSEPDGRSVIRLRFDCSALADWSRINLSRLPLYF
CCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECHHHHCCHHHCCHHHCCEEE
DADAPLACALHEALTLNTAKLWIRLPGQADRQPLDGYFAPLGFGEQDTLWPKADSAFSGY
CCCCCHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHH
QLLLEYFTFREKFMFVALQGLDGIELPAELPWFEIDVVLEKRWQHDFSFSEKNLRLHCVP
HHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCEEEEEEE
VINLFPLESDPLSLSSLQTEYLLRPMRIQDGYTEVYSVDSVISSRHTGHQVYVPFTSFRH
EEEEECCCCCCCCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHC
KGGMLRHDAPEYYYHTRVKRGPSGLHDTWLVLGGEAFDNHSVPDNENLSLSLTGTNGQLP
CCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCC
RKALQSTVLDTAVKSTGAQVRVRNLSAPSLPCYPPNRDRFHWRVLSHLGSSFLWMMDNAE
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCHH
VLRGTLALYDWTDNEMNRRRLEAIAEVKHSEIERFERGYLLRGVHIEITLDSNGFTGTGD
HHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCC
ICLFGEMLSRFFALYTDIHLFNRLTLILQPTGERLEWEENHQSRLPG
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDDLTLRYFDAEMRYLREAGEEFARAHPDRAAGLNLDKAGARDPYVERLFEGFAFLMGRL
CCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
REKLDDDLPELTEGLVSLLWPHYLRTIPSLSIVEFTPQWQEMKERMGVSKGFEVLSRPIG
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCHHHHHHHHHCCCC
ERETRCRYTTTQDMDLLPLTLRRAGLDSEPDGRSVIRLRFDCSALADWSRINLSRLPLYF
CCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECHHHHCCHHHCCHHHCCEEE
DADAPLACALHEALTLNTAKLWIRLPGQADRQPLDGYFAPLGFGEQDTLWPKADSAFSGY
CCCCCHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHH
QLLLEYFTFREKFMFVALQGLDGIELPAELPWFEIDVVLEKRWQHDFSFSEKNLRLHCVP
HHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCEEEEEEE
VINLFPLESDPLSLSSLQTEYLLRPMRIQDGYTEVYSVDSVISSRHTGHQVYVPFTSFRH
EEEEECCCCCCCCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHC
KGGMLRHDAPEYYYHTRVKRGPSGLHDTWLVLGGEAFDNHSVPDNENLSLSLTGTNGQLP
CCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCC
RKALQSTVLDTAVKSTGAQVRVRNLSAPSLPCYPPNRDRFHWRVLSHLGSSFLWMMDNAE
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCHH
VLRGTLALYDWTDNEMNRRRLEAIAEVKHSEIERFERGYLLRGVHIEITLDSNGFTGTGD
HHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCC
ICLFGEMLSRFFALYTDIHLFNRLTLILQPTGERLEWEENHQSRLPG
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA