| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is 51595833
Identifier: 51595833
GI number: 51595833
Start: 1794681
End: 1795193
Strand: Direct
Name: 51595833
Synonym: YPTB1496
Alternate gene names: NA
Gene position: 1794681-1795193 (Clockwise)
Preceding gene: 51595832
Following gene: 51595834
Centisome position: 37.83
GC content: 28.46
Gene sequence:
>513_bases ATGAAATCATTCAAACTAATAATGTTTTTTTTTATTTTATTATCTAGTTTTTCTGGATATTCAGGTGAACGCGGATATTT TGTTTTTGTATGGGGAGATGATATAAGTAAAAAAACGTTTATCGAATATCGTGAAAATAGTAATGAGTATATAAAAAATA AAGAATGTTGGGCTAAAAGATATGGGGACGGGATATCAATAGCCTATGTTAATTTAGTTCCAAATGGAATTAATATAGAG TTAGTGAATCGAGCATTGTCTGGAGATGCGAGTTCTATTTCCCAAATACAATATATACTTAAAAACTATAGAGATGACCA GATAACGCATGGTTTTGATGGTATGCTTATTATGAAAGAAAATAATAACATGATGAGTGTTTTATCCATACCATTATATG GAAGTTTAAATAAAGTTCAACAGGAATATAAGGCTAATATAAATAAATACGAATTCATAGATAAACTATTATGTGAATCA CTTTCACCATTTGATCGTCACTTTATCCCATGA
Upstream 100 bases:
>100_bases GATGAGTATGATATTGTTGAGTTAAACAAAGAGTTTGGTATAACCTATGCCAGAAAATCCAAAGGTAAAGTTAAAAAACC AGTTAAGGATCGTTAATGAT
Downstream 100 bases:
>100_bases TTATTTTACTTATTTAACTATATAAGGGAGTCAATGTAAGGTGTAGATCTTTTGGGGGTGATAAGTAAACTATAATGAAG GGTGTATGTTGAGTCGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKSFKLIMFFFILLSSFSGYSGERGYFVFVWGDDISKKTFIEYRENSNEYIKNKECWAKRYGDGISIAYVNLVPNGINIE LVNRALSGDASSISQIQYILKNYRDDQITHGFDGMLIMKENNNMMSVLSIPLYGSLNKVQQEYKANINKYEFIDKLLCES LSPFDRHFIP
Sequences:
>Translated_170_residues MKSFKLIMFFFILLSSFSGYSGERGYFVFVWGDDISKKTFIEYRENSNEYIKNKECWAKRYGDGISIAYVNLVPNGINIE LVNRALSGDASSISQIQYILKNYRDDQITHGFDGMLIMKENNNMMSVLSIPLYGSLNKVQQEYKANINKYEFIDKLLCES LSPFDRHFIP >Mature_170_residues MKSFKLIMFFFILLSSFSGYSGERGYFVFVWGDDISKKTFIEYRENSNEYIKNKECWAKRYGDGISIAYVNLVPNGINIE LVNRALSGDASSISQIQYILKNYRDDQITHGFDGMLIMKENNNMMSVLSIPLYGSLNKVQQEYKANINKYEFIDKLLCES LSPFDRHFIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19757; Mature: 19757
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFKLIMFFFILLSSFSGYSGERGYFVFVWGDDISKKTFIEYRENSNEYIKNKECWAKR CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHEEECCCCCCHHCCHHHHHHH YGDGISIAYVNLVPNGINIELVNRALSGDASSISQIQYILKNYRDDQITHGFDGMLIMKE CCCCEEEEEEEECCCCCCCEEEHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC NNNMMSVLSIPLYGSLNKVQQEYKANINKYEFIDKLLCESLSPFDRHFIP CCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCC >Mature Secondary Structure MKSFKLIMFFFILLSSFSGYSGERGYFVFVWGDDISKKTFIEYRENSNEYIKNKECWAKR CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHEEECCCCCCHHCCHHHHHHH YGDGISIAYVNLVPNGINIELVNRALSGDASSISQIQYILKNYRDDQITHGFDGMLIMKE CCCCEEEEEEEECCCCCCCEEEHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC NNNMMSVLSIPLYGSLNKVQQEYKANINKYEFIDKLLCESLSPFDRHFIP CCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA