| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is fabZ [H]
Identifier: 51595809
GI number: 51595809
Start: 1767062
End: 1767520
Strand: Direct
Name: fabZ [H]
Synonym: YPTB1472
Alternate gene names: 51595809
Gene position: 1767062-1767520 (Clockwise)
Preceding gene: 51595808
Following gene: 51595810
Centisome position: 37.24
GC content: 39.87
Gene sequence:
>459_bases TTGAATACATCATTTGGACAAGATATCATTAAAAAAATGATACCGCATCGTGAACCATTTTTAATGGTCGACAACGTAGA GCTGATCAATATTGAATGCAGGTTAATAAAAGCAATAAGAAGAGTTGACGAAAAAGACCCGGTATTTGGTGGTCATTTCC CCAATGACCCTATATATCCAGGTGTATTGCAACAAGAAAGTATGTTTCAAACCGCGCTTATTTTAATGTATTTTCTGCTA AATGAAACGGCTATTCCGCCAGCAGAGGAGAATATCATCCACGCAGTGGGAACACGAGTATACGATGTCTTTCACTTGTC CGCAGTACGCCCAGGAGAATTAATGACAATCCGTTGTTGTATTACAGAATACGACACATTTCTTGCCACCGCCATTGTTC AAATCACGGTTAACGATCAGATCGTAACCGTCGGAAAAGGAGAGTTTCATGTCTTCTGA
Upstream 100 bases:
>100_bases GATACCAAACGATTTTTATGGGCTATATTTAAATATGAAAAATACTGAATTAAATTTTTTAAAAACGAATTTTTTATTTA ACCAAGATATTACTAATGAA
Downstream 100 bases:
>100_bases TCGTATCGTTATCACTGGCGTTGCCATTAATACTCCCATTGGTGACACATTAGATCTAGTGGGTAATAATTTATTATCTG GAAAATCAGCCATCGGCTAC
Product: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydrase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MNTSFGQDIIKKMIPHREPFLMVDNVELINIECRLIKAIRRVDEKDPVFGGHFPNDPIYPGVLQQESMFQTALILMYFLL NETAIPPAEENIIHAVGTRVYDVFHLSAVRPGELMTIRCCITEYDTFLATAIVQITVNDQIVTVGKGEFHVF
Sequences:
>Translated_152_residues MNTSFGQDIIKKMIPHREPFLMVDNVELINIECRLIKAIRRVDEKDPVFGGHFPNDPIYPGVLQQESMFQTALILMYFLL NETAIPPAEENIIHAVGTRVYDVFHLSAVRPGELMTIRCCITEYDTFLATAIVQITVNDQIVTVGKGEFHVF >Mature_152_residues MNTSFGQDIIKKMIPHREPFLMVDNVELINIECRLIKAIRRVDEKDPVFGGHFPNDPIYPGVLQQESMFQTALILMYFLL NETAIPPAEENIIHAVGTRVYDVFHLSAVRPGELMTIRCCITEYDTFLATAIVQITVNDQIVTVGKGEFHVF
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=68, Percent_Identity=47.0588235294118, Blast_Score=64, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 17295; Mature: 17295
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSFGQDIIKKMIPHREPFLMVDNVELINIECRLIKAIRRVDEKDPVFGGHFPNDPIYP CCCCHHHHHHHHHCCCCCCEEEECCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GVLQQESMFQTALILMYFLLNETAIPPAEENIIHAVGTRVYDVFHLSAVRPGELMTIRCC CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE ITEYDTFLATAIVQITVNDQIVTVGKGEFHVF HHHHHHHHEEEEEEEEECCEEEEECCCEEEEC >Mature Secondary Structure MNTSFGQDIIKKMIPHREPFLMVDNVELINIECRLIKAIRRVDEKDPVFGGHFPNDPIYP CCCCHHHHHHHHHCCCCCCEEEECCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GVLQQESMFQTALILMYFLLNETAIPPAEENIIHAVGTRVYDVFHLSAVRPGELMTIRCC CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE ITEYDTFLATAIVQITVNDQIVTVGKGEFHVF HHHHHHHHEEEEEEEEECCEEEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]