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The map label for this gene is ydcJ [H]

Identifier: 51595762

GI number: 51595762

Start: 1703459

End: 1704904

Strand: Reverse

Name: ydcJ [H]

Synonym: YPTB1422

Alternate gene names: 51595762

Gene position: 1704904-1703459 (Counterclockwise)

Preceding gene: 51595774

Following gene: 51595750

Centisome position: 35.93

GC content: 48.82

Gene sequence:

>1446_bases
ATGACCCCCCAACAGTTTGTGCATCCCGATGAGATACGGGCCAAATTCTCCAGCGCTATGTCGGATATGTATCAGACCGA
AGTCCCCCTATATAGCACATTATTACGGCTCGTTGCGGACACGAATACACAAGAGATGATGCAAGATCAGAAGCTTACCC
GTCATTTGCAGCAAACTGGGGAAATTGAACGCCTAACGATGGAAAGACATGGCGCCATCCGCGTCGGGACAGCCGAAGAA
CTCAAGATGCTGCGGCGCTTGTTTGCAGTCATGGGAATGGTGCCGGTCGGTTATTATGATTTAGCACCAGCGGGTGTCCC
GGTTCACTCCACCGCCTTCCGTGCGGTGCATGAAACCTCACTGCAAGCCTGCCCTTTCAGAGTCTTCACCTCATTACTGC
GTCTGGAGTTGATTGAGCAACCTACACTACGGCAACTGGCTGCGGATATTCTGGCGAAAAGAACAATTTTCACCCCACAG
GCGATTAAACTAATTGTTCAGCATGAAACATCGGGGGGGCTCAATCGCCATCAAGCCGATGATTTCATTGCTCAGTCGCT
GGAAACATTTCGCTGGCATCATCAGGCAACGGTCAGCACTGAAACCTACCAACAGCTACACGATCAACACCGTCTGATTG
CTGATGTGGTCGCTTTCAAAGGTCCGCATATTAACCACCTAACTCCACGGACCTTAAATATCGACGTCGTACAAACAGCA
ATGGCAGAGCATAATATGATGCCCAAAGCCGTTATCGAAGGGCCACCCCCCCGCCACTGCCCAATACTGTTACGCCAAAC
CAGCTTCAAGGCGCTGGAGGAAAAAATCGCGTTTGTATCAAATGGTGGGCAAATAATACCAGGCCACCATACGGCCCGCT
TCGGGGAGATAGAGCAACGAGGAGCCGCTTTGACGGCCAAAGGCCGTAATCTGTATGACCACTTACTGCAAAGCGCACAG
GATCAATTGAACGTTCCTGTAAATGAGAACAATGCGGCGCAATATAGCGCGATCCTGAGCGAGAAATTTAGTCAATTCCC
TGATGATTACCCAACAATGCGAGCAGAGAAACTCGCCTTCTTCCGCTATTTTCCTACAGAAAAAGGCCTTATCACTGCAT
CAATACAGGAAATACAGGAAATACAGGAAATACAGGAAATACAGGAAATACAGGAAATGACATTAGACGAACTTATTGAT
AACGGCTTTATTCAATATGAACCGTTGGTTTATGAAGATTTCCTGCCAGTCAGCGCCGCTGGAATATTCCAGTCAAACTT
AGGCGAGAAAGGGCAGAGTCACTTTACCGGGCACTCCAATAAAGCAGACTTCCAGCGGGATTTGGGGATTGCGGTTATTG
ATGAACTGCAACTCTACGAAGCAACCCAGCAACGTTCCGTTGCTGAATGTGCAGCCGCCCTCAAACTAACGTTGTTAAGC
CAATAA

Upstream 100 bases:

>100_bases
AAACTGTATCAGCGTGATCCGCAACCATGATGGCCTACATTGAAAATTGTCTACATGAAAACCTGTCTACACTGAAAGCG
CCTGAAGGAGTTATCCGATT

Downstream 100 bases:

>100_bases
AAGGGAGCTACTTAGTATCAGGAGATAGCGCCTGAATATTTAACAATAGTTTATCTGCCCTATCGGACGGTAGTTGCGCA
TCGACAGGTAAGTACCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MTPQQFVHPDEIRAKFSSAMSDMYQTEVPLYSTLLRLVADTNTQEMMQDQKLTRHLQQTGEIERLTMERHGAIRVGTAEE
LKMLRRLFAVMGMVPVGYYDLAPAGVPVHSTAFRAVHETSLQACPFRVFTSLLRLELIEQPTLRQLAADILAKRTIFTPQ
AIKLIVQHETSGGLNRHQADDFIAQSLETFRWHHQATVSTETYQQLHDQHRLIADVVAFKGPHINHLTPRTLNIDVVQTA
MAEHNMMPKAVIEGPPPRHCPILLRQTSFKALEEKIAFVSNGGQIIPGHHTARFGEIEQRGAALTAKGRNLYDHLLQSAQ
DQLNVPVNENNAAQYSAILSEKFSQFPDDYPTMRAEKLAFFRYFPTEKGLITASIQEIQEIQEIQEIQEIQEMTLDELID
NGFIQYEPLVYEDFLPVSAAGIFQSNLGEKGQSHFTGHSNKADFQRDLGIAVIDELQLYEATQQRSVAECAAALKLTLLS
Q

Sequences:

>Translated_481_residues
MTPQQFVHPDEIRAKFSSAMSDMYQTEVPLYSTLLRLVADTNTQEMMQDQKLTRHLQQTGEIERLTMERHGAIRVGTAEE
LKMLRRLFAVMGMVPVGYYDLAPAGVPVHSTAFRAVHETSLQACPFRVFTSLLRLELIEQPTLRQLAADILAKRTIFTPQ
AIKLIVQHETSGGLNRHQADDFIAQSLETFRWHHQATVSTETYQQLHDQHRLIADVVAFKGPHINHLTPRTLNIDVVQTA
MAEHNMMPKAVIEGPPPRHCPILLRQTSFKALEEKIAFVSNGGQIIPGHHTARFGEIEQRGAALTAKGRNLYDHLLQSAQ
DQLNVPVNENNAAQYSAILSEKFSQFPDDYPTMRAEKLAFFRYFPTEKGLITASIQEIQEIQEIQEIQEIQEMTLDELID
NGFIQYEPLVYEDFLPVSAAGIFQSNLGEKGQSHFTGHSNKADFQRDLGIAVIDELQLYEATQQRSVAECAAALKLTLLS
Q
>Mature_480_residues
TPQQFVHPDEIRAKFSSAMSDMYQTEVPLYSTLLRLVADTNTQEMMQDQKLTRHLQQTGEIERLTMERHGAIRVGTAEEL
KMLRRLFAVMGMVPVGYYDLAPAGVPVHSTAFRAVHETSLQACPFRVFTSLLRLELIEQPTLRQLAADILAKRTIFTPQA
IKLIVQHETSGGLNRHQADDFIAQSLETFRWHHQATVSTETYQQLHDQHRLIADVVAFKGPHINHLTPRTLNIDVVQTAM
AEHNMMPKAVIEGPPPRHCPILLRQTSFKALEEKIAFVSNGGQIIPGHHTARFGEIEQRGAALTAKGRNLYDHLLQSAQD
QLNVPVNENNAAQYSAILSEKFSQFPDDYPTMRAEKLAFFRYFPTEKGLITASIQEIQEIQEIQEIQEIQEMTLDELIDN
GFIQYEPLVYEDFLPVSAAGIFQSNLGEKGQSHFTGHSNKADFQRDLGIAVIDELQLYEATQQRSVAECAAALKLTLLSQ

Specific function: Unknown

COG id: COG5383

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv3292 [H]

Homologues:

Organism=Escherichia coli, GI1787692, Length=465, Percent_Identity=53.763440860215, Blast_Score=464, Evalue=1e-132,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009770 [H]

Pfam domain/function: PF07063 DUF1338 [H]

EC number: NA

Molecular weight: Translated: 54337; Mature: 54205

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPQQFVHPDEIRAKFSSAMSDMYQTEVPLYSTLLRLVADTNTQEMMQDQKLTRHLQQTG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
EIERLTMERHGAIRVGTAEELKMLRRLFAVMGMVPVGYYDLAPAGVPVHSTAFRAVHETS
CHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHH
LQACPFRVFTSLLRLELIEQPTLRQLAADILAKRTIFTPQAIKLIVQHETSGGLNRHQAD
HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCHHHHH
DFIAQSLETFRWHHQATVSTETYQQLHDQHRLIADVVAFKGPHINHLTPRTLNIDVVQTA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHH
MAEHNMMPKAVIEGPPPRHCPILLRQTSFKALEEKIAFVSNGGQIIPGHHTARFGEIEQR
HHHHCCCCHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEECCCCCCHHHCCHHHC
GAALTAKGRNLYDHLLQSAQDQLNVPVNENNAAQYSAILSEKFSQFPDDYPTMRAEKLAF
CCEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
FRYFPTEKGLITASIQEIQEIQEIQEIQEIQEMTLDELIDNGFIQYEPLVYEDFLPVSAA
HHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHCCCCHHHH
GIFQSNLGEKGQSHFTGHSNKADFQRDLGIAVIDELQLYEATQQRSVAECAAALKLTLLS
HHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q
C
>Mature Secondary Structure 
TPQQFVHPDEIRAKFSSAMSDMYQTEVPLYSTLLRLVADTNTQEMMQDQKLTRHLQQTG
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
EIERLTMERHGAIRVGTAEELKMLRRLFAVMGMVPVGYYDLAPAGVPVHSTAFRAVHETS
CHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHH
LQACPFRVFTSLLRLELIEQPTLRQLAADILAKRTIFTPQAIKLIVQHETSGGLNRHQAD
HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCHHHHH
DFIAQSLETFRWHHQATVSTETYQQLHDQHRLIADVVAFKGPHINHLTPRTLNIDVVQTA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHH
MAEHNMMPKAVIEGPPPRHCPILLRQTSFKALEEKIAFVSNGGQIIPGHHTARFGEIEQR
HHHHCCCCHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEECCCCCCHHHCCHHHC
GAALTAKGRNLYDHLLQSAQDQLNVPVNENNAAQYSAILSEKFSQFPDDYPTMRAEKLAF
CCEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
FRYFPTEKGLITASIQEIQEIQEIQEIQEIQEMTLDELIDNGFIQYEPLVYEDFLPVSAA
HHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHCCCCHHHH
GIFQSNLGEKGQSHFTGHSNKADFQRDLGIAVIDELQLYEATQQRSVAECAAALKLTLLS
HHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]