| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is pla2
Identifier: 51595610
GI number: 51595610
Start: 1517662
End: 1518597
Strand: Reverse
Name: pla2
Synonym: YPTB1266
Alternate gene names: 51595610
Gene position: 1518597-1517662 (Counterclockwise)
Preceding gene: 51595611
Following gene: 51595609
Centisome position: 32.01
GC content: 40.06
Gene sequence:
>936_bases ATGAATAAAGAAGCACTAGCAAAAAAAGGGGCCGGCGCACTGGCATTACTTATTCTGAGTCATCCTGCCGTGGCCAACAA TAATACGGATACAGCAGGCAACGTGACTGTCAGCACCTCGCTTGGATTATTGAATGCCGAGTCAATCGAATCTGTTTATC AATCCAGTGAACCTAAACAAAAGCTCAGTCAGTTAAACTGGGAAGCCAACAATACACCCATCGTAAAAATGGATATCGCC TGGGATGCGTTACCCCGACTAACCCTAACAGCCAAGGGCTGGAGCACGCTTTCATCAGGTCAGGGAGTGATGGATAATTA TGATTGGCTTACCCCACAACAAACACAGTGGAGTGATTGGTCTCATCACGAAAAAACCAATTTGAATTATGCCAATGAAA TAGACATAAATGCGAAGATTTGGTTTTTAAAACAATACAATTATCGGGTTGGGCCTATTTTAGGTTATCAGGAAAACAAT CAAAGCTGGACAGCTTATGGTGGTAACTTTAATTATAATAATGACACAAATATCTTTACTGCTCCTGACGGCATTGTTGG CGTTGGTTATAAACAAAAATTTGATATGCTTTATATTGGCTTAGCAGGAAGTTATCGCTATCAACAATTAGAATTTAATG CCTTATTGAAATACAGCAATTGGGTTAATGCCAATGCATACGATAATCACTATAACCGCAAAGTTTCATTTAAAGACAGT AGCAAGAATTCAAGTTACTACTCGGCCGTTATTGATGTTGGATATTACTTCACAGAAAATACTAAACTTTTCGTGGAAGC CGCTTGGAACCAATATTCTGAAGGGCGAGGAGAGACACAAACGCTCAACTACGCCACCGGGAATGTTGGCAGTAGTAAAT CAGGTATTGAGTATCAAAGCCAAACCCTTACCGTGGGTTTTCAGTACAAATTTTAA
Upstream 100 bases:
>100_bases ATTAATTTTTTTAAAATTTTTTTAATCTTTAATTTAAAAAATTAAATCTTTATCGATGTTAGTTTTAATCATGATGATTT AAGTGAATTAAAGGTTAAAA
Downstream 100 bases:
>100_bases TCGCATAAAAACACAATAAGCGCCGGAAATCGAAAATCAGGGGTTGTGTACAATTGATCTGTACACAATCGATCTGTACA CAATACATCTGCACACAGTA
Product: outer membrane protease
Products: NA
Alternate protein names: Plasminogen activator [H]
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MNKEALAKKGAGALALLILSHPAVANNNTDTAGNVTVSTSLGLLNAESIESVYQSSEPKQKLSQLNWEANNTPIVKMDIA WDALPRLTLTAKGWSTLSSGQGVMDNYDWLTPQQTQWSDWSHHEKTNLNYANEIDINAKIWFLKQYNYRVGPILGYQENN QSWTAYGGNFNYNNDTNIFTAPDGIVGVGYKQKFDMLYIGLAGSYRYQQLEFNALLKYSNWVNANAYDNHYNRKVSFKDS SKNSSYYSAVIDVGYYFTENTKLFVEAAWNQYSEGRGETQTLNYATGNVGSSKSGIEYQSQTLTVGFQYKF
Sequences:
>Translated_311_residues MNKEALAKKGAGALALLILSHPAVANNNTDTAGNVTVSTSLGLLNAESIESVYQSSEPKQKLSQLNWEANNTPIVKMDIA WDALPRLTLTAKGWSTLSSGQGVMDNYDWLTPQQTQWSDWSHHEKTNLNYANEIDINAKIWFLKQYNYRVGPILGYQENN QSWTAYGGNFNYNNDTNIFTAPDGIVGVGYKQKFDMLYIGLAGSYRYQQLEFNALLKYSNWVNANAYDNHYNRKVSFKDS SKNSSYYSAVIDVGYYFTENTKLFVEAAWNQYSEGRGETQTLNYATGNVGSSKSGIEYQSQTLTVGFQYKF >Mature_311_residues MNKEALAKKGAGALALLILSHPAVANNNTDTAGNVTVSTSLGLLNAESIESVYQSSEPKQKLSQLNWEANNTPIVKMDIA WDALPRLTLTAKGWSTLSSGQGVMDNYDWLTPQQTQWSDWSHHEKTNLNYANEIDINAKIWFLKQYNYRVGPILGYQENN QSWTAYGGNFNYNNDTNIFTAPDGIVGVGYKQKFDMLYIGLAGSYRYQQLEFNALLKYSNWVNANAYDNHYNRKVSFKDS SKNSSYYSAVIDVGYYFTENTKLFVEAAWNQYSEGRGETQTLNYATGNVGSSKSGIEYQSQTLTVGFQYKF
Specific function: Seems to play an essential role in plague transmission by mediating flea blockage in a temperature-dependent fashion. Fibrinolytic activity prevails at 37 degrees Celsius whereas coagulase expression predominates at lower temperatures (<30 degrees Celsius
COG id: COG4571
COG function: function code M; Outer membrane protease
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase A26 family [H]
Homologues:
Organism=Escherichia coli, GI1786777, Length=290, Percent_Identity=39.6551724137931, Blast_Score=222, Evalue=3e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020080 - InterPro: IPR000036 - InterPro: IPR020079 [H]
Pfam domain/function: PF01278 Omptin [H]
EC number: =3.4.23.48 [H]
Molecular weight: Translated: 35013; Mature: 35013
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKEALAKKGAGALALLILSHPAVANNNTDTAGNVTVSTSLGLLNAESIESVYQSSEPKQ CCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHH KLSQLNWEANNTPIVKMDIAWDALPRLTLTAKGWSTLSSGQGVMDNYDWLTPQQTQWSDW HHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC SHHEKTNLNYANEIDINAKIWFLKQYNYRVGPILGYQENNQSWTAYGGNFNYNNDTNIFT CCCCCCCCCCCEEEECCEEEEEEEECCCEECCEEEEECCCCEEEEECCCCCCCCCCEEEE APDGIVGVGYKQKFDMLYIGLAGSYRYQQLEFNALLKYSNWVNANAYDNHYNRKVSFKDS CCCCEEECCCCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCC SKNSSYYSAVIDVGYYFTENTKLFVEAAWNQYSEGRGETQTLNYATGNVGSSKSGIEYQS CCCCCEEEEEEEEEEEEECCCEEEEEEECCHHCCCCCCCEEEEEEECCCCCCCCCCEEEC QTLTVGFQYKF EEEEEEEEECC >Mature Secondary Structure MNKEALAKKGAGALALLILSHPAVANNNTDTAGNVTVSTSLGLLNAESIESVYQSSEPKQ CCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHH KLSQLNWEANNTPIVKMDIAWDALPRLTLTAKGWSTLSSGQGVMDNYDWLTPQQTQWSDW HHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC SHHEKTNLNYANEIDINAKIWFLKQYNYRVGPILGYQENNQSWTAYGGNFNYNNDTNIFT CCCCCCCCCCCEEEECCEEEEEEEECCCEECCEEEEECCCCEEEEECCCCCCCCCCEEEE APDGIVGVGYKQKFDMLYIGLAGSYRYQQLEFNALLKYSNWVNANAYDNHYNRKVSFKDS CCCCEEECCCCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCC SKNSSYYSAVIDVGYYFTENTKLFVEAAWNQYSEGRGETQTLNYATGNVGSSKSGIEYQS CCCCCEEEEEEEEEEEEECCCEEEEEEECCHHCCCCCCCEEEEEEECCCCCCCCCCEEEC QTLTVGFQYKF EEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2526282; 2651310; 9748454; 11586360 [H]