| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is bglB
Identifier: 51595403
GI number: 51595403
Start: 1259575
End: 1261956
Strand: Reverse
Name: bglB
Synonym: YPTB1055
Alternate gene names: 51595403
Gene position: 1261956-1259575 (Counterclockwise)
Preceding gene: 51595404
Following gene: 51595401
Centisome position: 26.6
GC content: 48.61
Gene sequence:
>2382_bases ATGAATCTGAATAAAACAGGTTTTTTCACAGCGTTTACTTTCCTTTCAGCTCCCGTTTGGGCCCCCCCTCAGTTAAAAGA GGCTGAGTCTATTCCCTCTGTCATCGCGGCAATGACACTGGAAGAAAAAGCAGCCTTTGTTTCCGGCACGGGTATGAATA ACGCAGAAAAAGTTGCCGGTGCTGCCGGTTCAACCCTGGCGATACCAAGATTGGGGATACCACAGATTGTTTTTGCCGAT GGGCCGGTAGGGGTCAGGCTGGGGGCAGGACCCACCGGCGGTGAGAAGCGCTTTGCCACAGGGTTCCCAGTGTCGGTGGC AATGGCGGCGACCTGGGACCCCGCCATTATTAAGCGTGTCGGCGGAGCCATTGGTGATGAAGCCAAACGATATGGTGTGG ATTTAATTCTCGGTCCTGCGATTAATATTCAGCGCCACCCATTGAATGGGCGTAATTTCGAATATTTCACAGAAGACCCC TTACTCAATGCCATCATGACGGCCAGTTATATTGACGGTATGCAGACCGAGGGCGTGGGCGCAGTGCTCAAACATTTTGC CGCCAACAATCAGGAAACACGCCGTCAGATAGTCAACGAGATTATTTCAGACCGTGCGCTACATGAAATCTATTTCCCCG GTTTCGAATATGCCATGGAAAAGGCGCAACCTTGGGCAGTAATGAGCTCTTATCCATCAATTAATGGGACACCATCCTCG CAAAATCCCTGGTTATTAAAGGATGTCTTGCGCCAACAATGGAAGTTCGATGGCTTTGTCATGTCAGATTGGTATGGTGT GGCCGATCCGGTCAGCGCATTGAAAGGGGGTAACGATCTCAATATGCCGGGTGGGCGCACACCAGACGACTCACTATTCC TGACACCCAATACCGATCCTAAAGACGTGGTGTTAGCGGCGCTAAAATCTGGTGAGCTAACCCAAGACCAGATAGACGAA AATATTCGCAATATCCTCAATGTCGTGATCAAAACTCACCGGTTCAAAAACGGGGACGCGGCCGTGATGCCAGAACCTGT CGATCATTCAGCATTGGCGCGACAAATTGCAGCAGATTCAATGGTATTACTAAAAAATGATGCACAAACCCTCCCAATGA AAGCCACCTTCCGCGTTGCCGCTTTCGGTCAAAATATTGACAATTTCTTTGTAACCGGAGGGGGGAGTGCGGAGGTCAAT ATTGATCCCAAACGCTTGGTAACACTGCCACAGGGCCTGAAAAACGCAGGGATAGCGCTCATCAGGCAGATTGGGGATCA AACGTTGGATGAACCGGTTAACCAGCCTGTTATCACTAAAGCAGCACAACAGAGTGATATCGCCCTGATTTCGATCGGCC GCAGTTCAACAGAGGGGGCTGATCGCTACTCTATGGCGATGCATACCGCTGAAGTGGCAATGATTCAAAAGGTGGCCTCA GCGTTCCATCAGCAGAATAAAAAGGTGGTGGTTCTGCTCAATATTGGTTCGCCGATAGAAATGGCCTCTTGGGAACAATA TGCTGATGCCATTCTTCTCACCTGGCAACCCGGTGAACAGGCAGGAAATGCGGTTGCCGATATTCTGCTTGGTAAGGTAA ATCCTTCGGGTAAATTGCCGCTAACCTTCCCGAAACGGCTCGAAGATTCACCAAGCTTTGGTAACTACCCTGGTAACGCT AAAACAGTTATCTATGGTGAAGGGATCTATGTCAGCTATCGCTACTTTGATACCAAGCGCATTGCCCCGATGTATCCATT CGGTTATGGCCTTTCTTATTCCACAGTGAATTATGGGAAAATCAGCCCAGAAAAACCGGTATTCAACATCGATACAGAGA ATAGTATTGAGGTCAGTATCCCTGTACGTAATACCTCCGGTATCGATACAAAAGAGGTTGTGCAGCTTTATGTTCATGAC AATGCCTCACGCCTTGATCGGCCAGAACAGGAACTGAAAGCATTTGAAAAAGTCAGCCTGTCGGCGGGAGAGGAAAAACG CGTGGCCTTCAAACTGGATAAACGCGCGTTCTCTTATTACGATGAGGATAAAAACAACTGGGTGCTTGAACCGGGGCTCT TCACACTGCGCATTGGTCGTTCGTCAAGAGATATCCATGCAGAAACACCTCTGATTGTGAAATCCTCGACCCCAGCTTTC TCGTTTGATACCCCCTGGATTGACATCCAGACGTATGAAAAAGCGGCCACGATCGTCGCCCGTTTTATCGGTGATGAGCA AACTAACGCTTGGATTTATGGCAACCCAACACTGGGTGATAAACTGGAAGATGCCCTGAAACTGAAACCTGAATTCGCTA AAGATGAGGCGAAAAGGCAGAAACTGAAGCAGGAAATCTTACAAGAAATCAATTCATTGTAA
Upstream 100 bases:
>100_bases ATATTCACGGATGGTCTACCCCGTATTGATGGGTATACCACCACTGGCGGGCCTATGTGAGCATAAATCACTTCACTTTC ATTAGTACAATGGATGATAT
Downstream 100 bases:
>100_bases TGACTGAGCTTTCAATGCTTTGCTAACGCCCTGCTGCTTTTCCATCTCTGCCAGGGCGTTTTTCAAAAACTATCTGGGTC AGCCCGTGGTGATCCCAAGA
Product: beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 793; Mature: 793
Protein sequence:
>793_residues MNLNKTGFFTAFTFLSAPVWAPPQLKEAESIPSVIAAMTLEEKAAFVSGTGMNNAEKVAGAAGSTLAIPRLGIPQIVFAD GPVGVRLGAGPTGGEKRFATGFPVSVAMAATWDPAIIKRVGGAIGDEAKRYGVDLILGPAINIQRHPLNGRNFEYFTEDP LLNAIMTASYIDGMQTEGVGAVLKHFAANNQETRRQIVNEIISDRALHEIYFPGFEYAMEKAQPWAVMSSYPSINGTPSS QNPWLLKDVLRQQWKFDGFVMSDWYGVADPVSALKGGNDLNMPGGRTPDDSLFLTPNTDPKDVVLAALKSGELTQDQIDE NIRNILNVVIKTHRFKNGDAAVMPEPVDHSALARQIAADSMVLLKNDAQTLPMKATFRVAAFGQNIDNFFVTGGGSAEVN IDPKRLVTLPQGLKNAGIALIRQIGDQTLDEPVNQPVITKAAQQSDIALISIGRSSTEGADRYSMAMHTAEVAMIQKVAS AFHQQNKKVVVLLNIGSPIEMASWEQYADAILLTWQPGEQAGNAVADILLGKVNPSGKLPLTFPKRLEDSPSFGNYPGNA KTVIYGEGIYVSYRYFDTKRIAPMYPFGYGLSYSTVNYGKISPEKPVFNIDTENSIEVSIPVRNTSGIDTKEVVQLYVHD NASRLDRPEQELKAFEKVSLSAGEEKRVAFKLDKRAFSYYDEDKNNWVLEPGLFTLRIGRSSRDIHAETPLIVKSSTPAF SFDTPWIDIQTYEKAATIVARFIGDEQTNAWIYGNPTLGDKLEDALKLKPEFAKDEAKRQKLKQEILQEINSL
Sequences:
>Translated_793_residues MNLNKTGFFTAFTFLSAPVWAPPQLKEAESIPSVIAAMTLEEKAAFVSGTGMNNAEKVAGAAGSTLAIPRLGIPQIVFAD GPVGVRLGAGPTGGEKRFATGFPVSVAMAATWDPAIIKRVGGAIGDEAKRYGVDLILGPAINIQRHPLNGRNFEYFTEDP LLNAIMTASYIDGMQTEGVGAVLKHFAANNQETRRQIVNEIISDRALHEIYFPGFEYAMEKAQPWAVMSSYPSINGTPSS QNPWLLKDVLRQQWKFDGFVMSDWYGVADPVSALKGGNDLNMPGGRTPDDSLFLTPNTDPKDVVLAALKSGELTQDQIDE NIRNILNVVIKTHRFKNGDAAVMPEPVDHSALARQIAADSMVLLKNDAQTLPMKATFRVAAFGQNIDNFFVTGGGSAEVN IDPKRLVTLPQGLKNAGIALIRQIGDQTLDEPVNQPVITKAAQQSDIALISIGRSSTEGADRYSMAMHTAEVAMIQKVAS AFHQQNKKVVVLLNIGSPIEMASWEQYADAILLTWQPGEQAGNAVADILLGKVNPSGKLPLTFPKRLEDSPSFGNYPGNA KTVIYGEGIYVSYRYFDTKRIAPMYPFGYGLSYSTVNYGKISPEKPVFNIDTENSIEVSIPVRNTSGIDTKEVVQLYVHD NASRLDRPEQELKAFEKVSLSAGEEKRVAFKLDKRAFSYYDEDKNNWVLEPGLFTLRIGRSSRDIHAETPLIVKSSTPAF SFDTPWIDIQTYEKAATIVARFIGDEQTNAWIYGNPTLGDKLEDALKLKPEFAKDEAKRQKLKQEILQEINSL >Mature_793_residues MNLNKTGFFTAFTFLSAPVWAPPQLKEAESIPSVIAAMTLEEKAAFVSGTGMNNAEKVAGAAGSTLAIPRLGIPQIVFAD GPVGVRLGAGPTGGEKRFATGFPVSVAMAATWDPAIIKRVGGAIGDEAKRYGVDLILGPAINIQRHPLNGRNFEYFTEDP LLNAIMTASYIDGMQTEGVGAVLKHFAANNQETRRQIVNEIISDRALHEIYFPGFEYAMEKAQPWAVMSSYPSINGTPSS QNPWLLKDVLRQQWKFDGFVMSDWYGVADPVSALKGGNDLNMPGGRTPDDSLFLTPNTDPKDVVLAALKSGELTQDQIDE NIRNILNVVIKTHRFKNGDAAVMPEPVDHSALARQIAADSMVLLKNDAQTLPMKATFRVAAFGQNIDNFFVTGGGSAEVN IDPKRLVTLPQGLKNAGIALIRQIGDQTLDEPVNQPVITKAAQQSDIALISIGRSSTEGADRYSMAMHTAEVAMIQKVAS AFHQQNKKVVVLLNIGSPIEMASWEQYADAILLTWQPGEQAGNAVADILLGKVNPSGKLPLTFPKRLEDSPSFGNYPGNA KTVIYGEGIYVSYRYFDTKRIAPMYPFGYGLSYSTVNYGKISPEKPVFNIDTENSIEVSIPVRNTSGIDTKEVVQLYVHD NASRLDRPEQELKAFEKVSLSAGEEKRVAFKLDKRAFSYYDEDKNNWVLEPGLFTLRIGRSSRDIHAETPLIVKSSTPAF SFDTPWIDIQTYEKAATIVARFIGDEQTNAWIYGNPTLGDKLEDALKLKPEFAKDEAKRQKLKQEILQEINSL
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=661, Percent_Identity=30.7110438729198, Blast_Score=263, Evalue=2e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 86904; Mature: 86904
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNKTGFFTAFTFLSAPVWAPPQLKEAESIPSVIAAMTLEEKAAFVSGTGMNNAEKVAG CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHC AAGSTLAIPRLGIPQIVFADGPVGVRLGAGPTGGEKRFATGFPVSVAMAATWDPAIIKRV CCCCEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCEECCCCEEEEEECCCCHHHHHHH GGAIGDEAKRYGVDLILGPAINIQRHPLNGRNFEYFTEDPLLNAIMTASYIDGMQTEGVG CCCCCCHHHHHCCEEEECCCCCEEECCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCHH AVLKHFAANNQETRRQIVNEIISDRALHEIYFPGFEYAMEKAQPWAVMSSYPSINGTPSS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCCC QNPWLLKDVLRQQWKFDGFVMSDWYGVADPVSALKGGNDLNMPGGRTPDDSLFLTPNTDP CCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCH KDVVLAALKSGELTQDQIDENIRNILNVVIKTHRFKNGDAAVMPEPVDHSALARQIAADS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHCCC MVLLKNDAQTLPMKATFRVAAFGQNIDNFFVTGGGSAEVNIDPKRLVTLPQGLKNAGIAL EEEEECCCCCCCCEEEEEEEEECCCCCEEEEECCCCEEEEECHHHEEECCCCCHHHHHHH IRQIGDQTLDEPVNQPVITKAAQQSDIALISIGRSSTEGADRYSMAMHTAEVAMIQKVAS HHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH AFHQQNKKVVVLLNIGSPIEMASWEQYADAILLTWQPGEQAGNAVADILLGKVNPSGKLP HHHHCCCCEEEEEECCCCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHEECCCCCCCCC LTFPKRLEDSPSFGNYPGNAKTVIYGEGIYVSYRYFDTKRIAPMYPFGYGLSYSTVNYGK CCCHHHCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCEEECCC ISPEKPVFNIDTENSIEVSIPVRNTSGIDTKEVVQLYVHDNASRLDRPEQELKAFEKVSL CCCCCCEEECCCCCEEEEEEEECCCCCCCHHHEEEEEECCCHHHCCCCHHHHHHHHHHHC SAGEEKRVAFKLDKRAFSYYDEDKNNWVLEPGLFTLRIGRSSRDIHAETPLIVKSSTPAF CCCCCCEEEEEEHHHHHHHCCCCCCCEEECCCEEEEEECCCCCCCCCCCCEEEECCCCCE SFDTPWIDIQTYEKAATIVARFIGDEQTNAWIYGNPTLGDKLEDALKLKPEFAKDEAKRQ ECCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHH KLKQEILQEINSL HHHHHHHHHHHCC >Mature Secondary Structure MNLNKTGFFTAFTFLSAPVWAPPQLKEAESIPSVIAAMTLEEKAAFVSGTGMNNAEKVAG CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHC AAGSTLAIPRLGIPQIVFADGPVGVRLGAGPTGGEKRFATGFPVSVAMAATWDPAIIKRV CCCCEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCEECCCCEEEEEECCCCHHHHHHH GGAIGDEAKRYGVDLILGPAINIQRHPLNGRNFEYFTEDPLLNAIMTASYIDGMQTEGVG CCCCCCHHHHHCCEEEECCCCCEEECCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCHH AVLKHFAANNQETRRQIVNEIISDRALHEIYFPGFEYAMEKAQPWAVMSSYPSINGTPSS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCCC QNPWLLKDVLRQQWKFDGFVMSDWYGVADPVSALKGGNDLNMPGGRTPDDSLFLTPNTDP CCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCH KDVVLAALKSGELTQDQIDENIRNILNVVIKTHRFKNGDAAVMPEPVDHSALARQIAADS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHCCC MVLLKNDAQTLPMKATFRVAAFGQNIDNFFVTGGGSAEVNIDPKRLVTLPQGLKNAGIAL EEEEECCCCCCCCEEEEEEEEECCCCCEEEEECCCCEEEEECHHHEEECCCCCHHHHHHH IRQIGDQTLDEPVNQPVITKAAQQSDIALISIGRSSTEGADRYSMAMHTAEVAMIQKVAS HHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH AFHQQNKKVVVLLNIGSPIEMASWEQYADAILLTWQPGEQAGNAVADILLGKVNPSGKLP HHHHCCCCEEEEEECCCCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHEECCCCCCCCC LTFPKRLEDSPSFGNYPGNAKTVIYGEGIYVSYRYFDTKRIAPMYPFGYGLSYSTVNYGK CCCHHHCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCEEECCC ISPEKPVFNIDTENSIEVSIPVRNTSGIDTKEVVQLYVHDNASRLDRPEQELKAFEKVSL CCCCCCEEECCCCCEEEEEEEECCCCCCCHHHEEEEEECCCHHHCCCCHHHHHHHHHHHC SAGEEKRVAFKLDKRAFSYYDEDKNNWVLEPGLFTLRIGRSSRDIHAETPLIVKSSTPAF CCCCCCEEEEEEHHHHHHHCCCCCCCEEECCCEEEEEECCCCCCCCCCCCEEEECCCCCE SFDTPWIDIQTYEKAATIVARFIGDEQTNAWIYGNPTLGDKLEDALKLKPEFAKDEAKRQ ECCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHH KLKQEILQEINSL HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2505054 [H]