| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is 51595394
Identifier: 51595394
GI number: 51595394
Start: 1249789
End: 1250421
Strand: Direct
Name: 51595394
Synonym: YPTB1046
Alternate gene names: NA
Gene position: 1249789-1250421 (Clockwise)
Preceding gene: 51595393
Following gene: 51595395
Centisome position: 26.34
GC content: 49.13
Gene sequence:
>633_bases ATGAACCGTATGTTGCGCTGGATTTTTACGCTGTGCATCGCTTATCCCGTGGTCTGGATTTGGCTCGGTGTCCGGGTTGC TGGCCGCAAAAAGTTACCAAGAGACGGCCCGGCGATTATTGTAGCGAACCACAACAGCCATCTGGACGTACTGACGTTAT TCACCCTGTTCCCGCTCTCGACGCTGGTGAAAGTGCAACCCGTTGCTGCAGCAGATTATTTTCTGAAGAATAAAGTGATT AGTTGGTTTGCCCTGAAGGTGATTGGCATTATTCCGGTTTATCGCGGCGCTCATCAGGCGAATCCATTGCAGGCCTGTGT GGATGCTCTGGCGGAAAAAAAGATCGTGATTATTTTTCCCGAAGGTACGCGGGGAGAGCCGGGTAAATTCTCGGAGATAA AATCCGGTATCTGGCATTTAAGTCAGCGGTGCCCGGAAGTCCCCATTATTCCTGTCTACATGCACGGCCTTGACCGTTCG ATGGGTAAAGGCCAGAAAATCCCCGTCCCGTTTTTCATCGACATATTTATCGACGACCCGCTGTTTTACGATGCGGAGAA AGTGACTTTTAAGCAATTACTCTTAAATCGTTTTGTCGCTTTACAGCAACTTGCCACAAGGAAAACCTCATGA
Upstream 100 bases:
>100_bases GCCAGGGCACGGCGGTATTCTCGATCGTCTGGACTCCCTGATTTATACCGCGCCGCTGTTCTTCCACTTCTATCACTACT TCTACGTTTAAGGCGCGCTG
Downstream 100 bases:
>100_bases GTCAGGAAGTGCGTTTATTTCAAGAAGGCATGTTCACCGCCAGCGATGAAACATCGTTGTATTTTCGCCACTGGTCTGCC ACGGAAGGTAACAGCAAGAA
Product: acyltransferase
Products: NA
Alternate protein names: Phospholipid/Glycerol Acyltransferase; 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferase; Acyltransferase Protein; 2-Acylglycerophosphoethanolamine Acyltransferase; Phospholipd Biosynthesis-Like Protein; Acyltransferase Family Protein; Acyltransferase Domain Protein
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MNRMLRWIFTLCIAYPVVWIWLGVRVAGRKKLPRDGPAIIVANHNSHLDVLTLFTLFPLSTLVKVQPVAAADYFLKNKVI SWFALKVIGIIPVYRGAHQANPLQACVDALAEKKIVIIFPEGTRGEPGKFSEIKSGIWHLSQRCPEVPIIPVYMHGLDRS MGKGQKIPVPFFIDIFIDDPLFYDAEKVTFKQLLLNRFVALQQLATRKTS
Sequences:
>Translated_210_residues MNRMLRWIFTLCIAYPVVWIWLGVRVAGRKKLPRDGPAIIVANHNSHLDVLTLFTLFPLSTLVKVQPVAAADYFLKNKVI SWFALKVIGIIPVYRGAHQANPLQACVDALAEKKIVIIFPEGTRGEPGKFSEIKSGIWHLSQRCPEVPIIPVYMHGLDRS MGKGQKIPVPFFIDIFIDDPLFYDAEKVTFKQLLLNRFVALQQLATRKTS >Mature_210_residues MNRMLRWIFTLCIAYPVVWIWLGVRVAGRKKLPRDGPAIIVANHNSHLDVLTLFTLFPLSTLVKVQPVAAADYFLKNKVI SWFALKVIGIIPVYRGAHQANPLQACVDALAEKKIVIIFPEGTRGEPGKFSEIKSGIWHLSQRCPEVPIIPVYMHGLDRS MGKGQKIPVPFFIDIFIDDPLFYDAEKVTFKQLLLNRFVALQQLATRKTS
Specific function: Unknown
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17564032, Length=135, Percent_Identity=28.8888888888889, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23780; Mature: 23780
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRMLRWIFTLCIAYPVVWIWLGVRVAGRKKLPRDGPAIIVANHNSHLDVLTLFTLFPLS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH TLVKVQPVAAADYFLKNKVISWFALKVIGIIPVYRGAHQANPLQACVDALAEKKIVIIFP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEC EGTRGEPGKFSEIKSGIWHLSQRCPEVPIIPVYMHGLDRSMGKGQKIPVPFFIDIFIDDP CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCEEEEEEECCC LFYDAEKVTFKQLLLNRFVALQQLATRKTS CEECHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRMLRWIFTLCIAYPVVWIWLGVRVAGRKKLPRDGPAIIVANHNSHLDVLTLFTLFPLS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH TLVKVQPVAAADYFLKNKVISWFALKVIGIIPVYRGAHQANPLQACVDALAEKKIVIIFP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEC EGTRGEPGKFSEIKSGIWHLSQRCPEVPIIPVYMHGLDRSMGKGQKIPVPFFIDIFIDDP CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCEEEEEEECCC LFYDAEKVTFKQLLLNRFVALQQLATRKTS CEECHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA