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The map label for this gene is ybaW

Identifier: 51595315

GI number: 51595315

Start: 1161145

End: 1161552

Strand: Direct

Name: ybaW

Synonym: YPTB0965

Alternate gene names: 51595315

Gene position: 1161145-1161552 (Clockwise)

Preceding gene: 51595314

Following gene: 51595318

Centisome position: 24.47

GC content: 45.59

Gene sequence:

>408_bases
ATGCACACCCATATTAAAGTCCGGGGTTTCCATATTGATGTTTTTCAACATGTTAATAATGCCCGATACTTAGAGTTTCT
CGAAGAGGCCCGTTGGGAATGGCTGGATGGGCAACCCGTATTCCAATGGATGGTTGAGCACCAAATTGCTTTTATCGTGG
TGAATATCAATATTAGCTACCGTCGGCCTGCTGTATTAGGTGACTTGCTACGTATCGATAGCCAGTTACTTAAACTAAAC
GGTAAAAGTGGTGTGATGAAGCATACGATCACGCTTGAACCAACGGCTATCCCGGTTGTTGATGCGGAACTGACATTTGT
CTGTATTGACCAACGTAGCCAGAAAGCATTGCCGCTGGAAGGTGAGTTGCGTGAAAAACTGGAGGAGCTAGTCAATCGGG
GAGCTTGA

Upstream 100 bases:

>100_bases
GCTATGCAGCAATTTTCGTCTGCTAATCTTGTCTTGAGGTCCTACCAGTTTTGTTGGTAATCCTCTCACATTTATTCACA
GATTGGAGAAGCTCATAGCC

Downstream 100 bases:

>100_bases
TATTAATCCTAAACGGTGGTTGAGAAGGGGAACGGTTATTGAGAGCGTGTGTTGCGGCCATATTATATAGATAGGCCGCT
ATATATCAGGCTAACCCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Acyl-CoA thioester hydrolase ybaW; Thioesterase 3 [H]

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MHTHIKVRGFHIDVFQHVNNARYLEFLEEARWEWLDGQPVFQWMVEHQIAFIVVNINISYRRPAVLGDLLRIDSQLLKLN
GKSGVMKHTITLEPTAIPVVDAELTFVCIDQRSQKALPLEGELREKLEELVNRGA

Sequences:

>Translated_135_residues
MHTHIKVRGFHIDVFQHVNNARYLEFLEEARWEWLDGQPVFQWMVEHQIAFIVVNINISYRRPAVLGDLLRIDSQLLKLN
GKSGVMKHTITLEPTAIPVVDAELTFVCIDQRSQKALPLEGELREKLEELVNRGA
>Mature_135_residues
MHTHIKVRGFHIDVFQHVNNARYLEFLEEARWEWLDGQPVFQWMVEHQIAFIVVNINISYRRPAVLGDLLRIDSQLLKLN
GKSGVMKHTITLEPTAIPVVDAELTFVCIDQRSQKALPLEGELREKLEELVNRGA

Specific function: Long-chain acyl-CoA thioesterase with a preference for 3,5-tetradecadienoyl-CoA [H]

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786647, Length=131, Percent_Identity=69.4656488549618, Blast_Score=195, Evalue=9e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15640; Mature: 15640

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTHIKVRGFHIDVFQHVNNARYLEFLEEARWEWLDGQPVFQWMVEHQIAFIVVNINISY
CCCEEEEEEEEEEHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEEEEECC
RRPAVLGDLLRIDSQLLKLNGKSGVMKHTITLEPTAIPVVDAELTFVCIDQRSQKALPLE
CCCHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCC
GELREKLEELVNRGA
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MHTHIKVRGFHIDVFQHVNNARYLEFLEEARWEWLDGQPVFQWMVEHQIAFIVVNINISY
CCCEEEEEEEEEEHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEEEEECC
RRPAVLGDLLRIDSQLLKLNGKSGVMKHTITLEPTAIPVVDAELTFVCIDQRSQKALPLE
CCCHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCC
GELREKLEELVNRGA
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]