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The map label for this gene is yajR

Identifier: 51595297

GI number: 51595297

Start: 1139788

End: 1141158

Strand: Reverse

Name: yajR

Synonym: YPTB0947

Alternate gene names: 51595297

Gene position: 1141158-1139788 (Counterclockwise)

Preceding gene: 51595298

Following gene: 51595295

Centisome position: 24.05

GC content: 48.29

Gene sequence:

>1371_bases
GTGGCAATGAACGATAATAAAATGACTCCGCTAGAGCTTCGAGCTACCTGGGGGCTAGGTACGGTATTCTCACTACGCAT
GCTGGGCATGTTCATGGTATTACCGGTTCTGACCACCTATGGTATGGCACTTTCCGGTGCCAGTGAGGCATTGATAGGTA
TCGCAATTGGTATCTATGGTTTATCTCAGGCCATTTTTCAGATCCCCTTTGGGCTGCTTTCTGATCGTATCGGTCGTAAA
CCCATGATCATCGGTGGGCTGCTGGTTTTTGCATTAGGTAGCATTATTGCCGCATTAAGTGATTCTATTTGGGGCATTAT
TCTTGGCCGTGCACTGCAAGGCTCCGGTGCAATCGCCGCCGCTGTCATGGCGCTATTGTCTGATTTAACCCGTGAGCAAA
ACCGCACCAAAGCAATGGCATTTATTGGTGTCAGTTTTGGTGTCACCTTTGCTATGGCCATGGTGCTGGGGCCAATTGTG
ACGCATGCTTTTGGTCTGCAAGCTCTGTTTTGGGGGATTGCAATACTGGCGCTGTTAGGCATTGTTATCACATTAACCGT
GGTTCCTTCAGCCAATAGCCACGTCCTCAATCGTGAATCGAGCATGGTTAAAGGCAGCGTGAGTAAGGTGCTCCACAACA
GTCGGTTACTTAAACTCAATTTCGGCATCATGTGCTTGCATATCCTACTGATGTCGAGCTTTGTTGCCTTACCTCAAATG
ATGGCTAATGCTGGGTTAGCGCCCGCTCAACATTGGGTTGTTTATCTGGTAACCATGTTGGTCTCTTTCGCCGCAGTAGT
ACCGTTTATTATTTATGCCGAAATGAAGCGCCGCATGAAGCAGGTCTTTATGGGCTGTGTAGCGGTATTATTTATCGCCG
AGGTCGTATTGTGGTTTGCTGGCCAAGACCTATGGATAATTATTGCCGGTGTGCAGTTATTCTTTATTGCTTTTAATGTG
ATGGAAGCTATTTTGCCATCGCTGATCAGTAAAGAATCACCTGCTGGTTACAAAGGCACTGCCATGGGGATTTATTCCAC
CAGTCAGTTTATTGGCGTAGCGATTGGCGGCAGTCTTGGGGGCTGGATATTTGGCCTTGAAGGTGCCGATATGGTATTTG
CGGCTGGAGCTATTATCGCACTGGTATGGTTCGCCGTCAGTGTCACCATGCAAGAACCGCCTTATGTTAGCAGCCTGCGC
ATCACCTTGTCAGAGTCGGCTGTAAAAAATACAACCTTGGAAGAGCGCCTCAAAGCCCAGCCAGGTGTTACCGAGGCGGT
CGTGGTCACGGCGGAACGCAGTGCTTATGTCAAAGTCGATATTAAACAGACTAATCGCAACCAACTGGAACAGTTGATCA
ATGCGGCTTAA

Upstream 100 bases:

>100_bases
TCTTTTCTCTCTATAGCCTCATCGGTCATACATTCTAAACATCAATAGATTTACCGACTGGCATAAACATCACTACAATA
GCGCAGAATGTTTTTTTGAG

Downstream 100 bases:

>100_bases
AAAAGAATGATTTATAGGGCCAAAATTAAGGGGCAAAGACATGAAAAAGCCGTTGCCCCTTTAGTCGTTATACCGTTTGA
GGCTCAATAGCAAACCCTTG

Product: MFS multidrug efflux pump

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MAMNDNKMTPLELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALSGASEALIGIAIGIYGLSQAIFQIPFGLLSDRIGRK
PMIIGGLLVFALGSIIAALSDSIWGIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGVTFAMAMVLGPIV
THAFGLQALFWGIAILALLGIVITLTVVPSANSHVLNRESSMVKGSVSKVLHNSRLLKLNFGIMCLHILLMSSFVALPQM
MANAGLAPAQHWVVYLVTMLVSFAAVVPFIIYAEMKRRMKQVFMGCVAVLFIAEVVLWFAGQDLWIIIAGVQLFFIAFNV
MEAILPSLISKESPAGYKGTAMGIYSTSQFIGVAIGGSLGGWIFGLEGADMVFAAGAIIALVWFAVSVTMQEPPYVSSLR
ITLSESAVKNTTLEERLKAQPGVTEAVVVTAERSAYVKVDIKQTNRNQLEQLINAA

Sequences:

>Translated_456_residues
MAMNDNKMTPLELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALSGASEALIGIAIGIYGLSQAIFQIPFGLLSDRIGRK
PMIIGGLLVFALGSIIAALSDSIWGIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGVTFAMAMVLGPIV
THAFGLQALFWGIAILALLGIVITLTVVPSANSHVLNRESSMVKGSVSKVLHNSRLLKLNFGIMCLHILLMSSFVALPQM
MANAGLAPAQHWVVYLVTMLVSFAAVVPFIIYAEMKRRMKQVFMGCVAVLFIAEVVLWFAGQDLWIIIAGVQLFFIAFNV
MEAILPSLISKESPAGYKGTAMGIYSTSQFIGVAIGGSLGGWIFGLEGADMVFAAGAIIALVWFAVSVTMQEPPYVSSLR
ITLSESAVKNTTLEERLKAQPGVTEAVVVTAERSAYVKVDIKQTNRNQLEQLINAA
>Mature_455_residues
AMNDNKMTPLELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALSGASEALIGIAIGIYGLSQAIFQIPFGLLSDRIGRKP
MIIGGLLVFALGSIIAALSDSIWGIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGVTFAMAMVLGPIVT
HAFGLQALFWGIAILALLGIVITLTVVPSANSHVLNRESSMVKGSVSKVLHNSRLLKLNFGIMCLHILLMSSFVALPQMM
ANAGLAPAQHWVVYLVTMLVSFAAVVPFIIYAEMKRRMKQVFMGCVAVLFIAEVVLWFAGQDLWIIIAGVQLFFIAFNVM
EAILPSLISKESPAGYKGTAMGIYSTSQFIGVAIGGSLGGWIFGLEGADMVFAAGAIIALVWFAVSVTMQEPPYVSSLRI
TLSESAVKNTTLEERLKAQPGVTEAVVVTAERSAYVKVDIKQTNRNQLEQLINAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=454, Percent_Identity=73.1277533039648, Blast_Score=671, Evalue=0.0,
Organism=Escherichia coli, GI1790146, Length=175, Percent_Identity=29.1428571428571, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48791; Mature: 48660

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMNDNKMTPLELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALSGASEALIGIAIGIYG
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LSQAIFQIPFGLLSDRIGRKPMIIGGLLVFALGSIIAALSDSIWGIILGRALQGSGAIAA
HHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AVMALLSDLTREQNRTKAMAFIGVSFGVTFAMAMVLGPIVTHAFGLQALFWGIAILALLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVITLTVVPSANSHVLNRESSMVKGSVSKVLHNSRLLKLNFGIMCLHILLMSSFVALPQM
HHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHH
MANAGLAPAQHWVVYLVTMLVSFAAVVPFIIYAEMKRRMKQVFMGCVAVLFIAEVVLWFA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQDLWIIIAGVQLFFIAFNVMEAILPSLISKESPAGYKGTAMGIYSTSQFIGVAIGGSLG
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHEEEECCCCC
GWIFGLEGADMVFAAGAIIALVWFAVSVTMQEPPYVSSLRITLSESAVKNTTLEERLKAQ
CEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHCCHHHHHCCC
PGVTEAVVVTAERSAYVKVDIKQTNRNQLEQLINAA
CCCCEEEEEEECCCEEEEEEEECCCHHHHHHHHHCC
>Mature Secondary Structure 
AMNDNKMTPLELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALSGASEALIGIAIGIYG
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH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CCCCEEEEEEECCCEEEEEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]