| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is pstS
Identifier: 51595269
GI number: 51595269
Start: 1108912
End: 1109976
Strand: Direct
Name: pstS
Synonym: YPTB0919
Alternate gene names: 51595269
Gene position: 1108912-1109976 (Clockwise)
Preceding gene: 51595268
Following gene: 51595270
Centisome position: 23.37
GC content: 48.73
Gene sequence:
>1065_bases ATGAAATGGGGAAAACTGGCGCTCTTAAATGTCATTTTATGGCATAGCTATACTGTTTTTGCGCAATCAATAGCTTTAGT ACAGCCAGTGGCTTTAACCCGATCAGTGGCTTTAACTCGATCAGTGGCTTTAGTACTGCCAGTGACGCTAGCCTCTCCCT CAATTACCGTCTCTCCGTCGGTACCAATGCCAGTTGCCAACACCCTATCAGGAAACCTTTCCAGTGTTGGTTCTGACACG TTGGCCAATCTGATGTCATTGTGGGCAAATGATTTCAATCATCACTATCCTGGCGTTAATCTGCAAATACAGGCTGCGGG GTCATCTACCGCTCCTGCTGCGCTGGCTGCCGGGGCAACGCAGCTTGGCCCAATGAGCCGGCCAATGAAAGCTGGCGAGA TTGCTGCTTTTATTCAACGCTATGGCTACCCACCGTTAGCCGTGCCAGTAGCCGTGGATGCGCTAGTGGTGTTTGTTCAT CAGGATAACCCTCTGAATAGGCTGACGTTATCGCAACTGGATGCTATTTTTTCGCAAAATCGCCGTTGTGGAGAACCCCA GAAAATTCAACGCTTCGGTGACTTGGGGTTGAGTGGCGATTGGGCGGCACGCCCCCTGCAACGCTATGGTCGTAATTCTG CATCGGGGACGTATGGCTATTTTAAGCGCCGGGTACTCTGTGATGGTGATTTTATAAATAATATCAACGAATTACCCGGA TCTGCATCCGTGGTGCAAGCGGTGGCGGGTTCATTGAATGGCATCGGTTATTCCAGTATTGGTTTTCGTAACAGTGGTGT TAAATCACTGCCGTTGGCAGCGAGTGGGCAAGATTTTGTTATGCCAACTGCAGAAAATGTCAGTAATGGCCTCTATCCGT TATCACGCTATCTCTATATTTATATTAATAAAGCACCAGGGCAGCCGCTGGAAGCACTCACTGCGGCATTTCTTGAGCGT GCGCTATCCCCCGAAGGGCAAAAGTTGGTCAGCCATGATGGCTATTTGCCATTACCGCCTGCTATGTTGAATAAAACCCG AAAAACATTGGGTTTTACTGACTAA
Upstream 100 bases:
>100_bases GGGTACCCGTTTTATTTTTACCTTACCGAACAGGTTGATTGTTCCAACTGTTTTAGTCGAGAATGCAGTCAAATCTTAAG ACGGTGCGGATAAAAGCCTA
Downstream 100 bases:
>100_bases TCTGCTCTGTATATGTACTCAAAAGTAGGGTATATCGCTGTTTCAACCAACAAAAATAATTTTGGGTTATTCCGGTTGAG TGAAATTGATGGAGCCTGTG
Product: phosphate ABC transporter periplasmic-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALVLPVTLASPSITVSPSVPMPVANTLSGNLSSVGSDT LANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGATQLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVH QDNPLNRLTLSQLDAIFSQNRRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPG SASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYIYINKAPGQPLEALTAAFLER ALSPEGQKLVSHDGYLPLPPAMLNKTRKTLGFTD
Sequences:
>Translated_354_residues MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALVLPVTLASPSITVSPSVPMPVANTLSGNLSSVGSDT LANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGATQLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVH QDNPLNRLTLSQLDAIFSQNRRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPG SASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYIYINKAPGQPLEALTAAFLER ALSPEGQKLVSHDGYLPLPPAMLNKTRKTLGFTD >Mature_354_residues MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALVLPVTLASPSITVSPSVPMPVANTLSGNLSSVGSDT LANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGATQLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVH QDNPLNRLTLSQLDAIFSQNRRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPG SASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYIYINKAPGQPLEALTAAFLER ALSPEGQKLVSHDGYLPLPPAMLNKTRKTLGFTD
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane. Note=Found in the cytoplasmic membrane in a form that is closely associated with the cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37769; Mature: 37769
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALVLPVTLASPSITVSPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCC VPMPVANTLSGNLSSVGSDTLANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGAT CCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCH QLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVHQDNPLNRLTLSQLDAIFSQN HCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCC RRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPG CCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHEEEECCHHHHHHHHCCC SASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYI HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCEEEEE YINKAPGQPLEALTAAFLERALSPEGQKLVSHDGYLPLPPAMLNKTRKTLGFTD EEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALVLPVTLASPSITVSPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCC VPMPVANTLSGNLSSVGSDTLANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGAT CCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCH QLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVHQDNPLNRLTLSQLDAIFSQN HCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCC RRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPG CCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHEEEECCHHHHHHHHCCC SASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYI HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCEEEEE YINKAPGQPLEALTAAFLERALSPEGQKLVSHDGYLPLPPAMLNKTRKTLGFTD EEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7741855 [H]