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The map label for this gene is rcsC

Identifier: 51595231

GI number: 51595231

Start: 1063502

End: 1065355

Strand: Direct

Name: rcsC

Synonym: YPTB0881

Alternate gene names: NA

Gene position: 1063502-1065355 (Clockwise)

Preceding gene: 51595230

Following gene: 51595232

Centisome position: 22.41

GC content: 45.15

Gene sequence:

>1854_bases
ATGGCGGATAAATCAGTTGAATTAACGCCCGTGGTAGAGGCACCCGTTGCGTTTTCATTGCCTTACTTTGAGTTTTTGGT
CTGTACCCGGCGTTATGAAGATGCGGGTAGATTATTGATACTGATGTTGGAGAAGCTAGATACTCAATATGGGCGCTGGG
ATGTTTTTTCTCTGAATAAAGAGCCAATACAGCAACAAGAGTATTATTGTAATCGGCTAGCCGCCGCTATCGGATGCTTA
TTTTCTGATCCCGGATTTGTGATTTCGGAAACAGGTTTCCTTCAGCTAATCAATTTCCACCGTTGGATTGCGTTGATTTT
TGCAGCATCGACTTTTGGTCATGCTGATCATGTGATCACTAACCTTAATGAAGCCGGAGAAGGGTGCTCGCACCCATTGC
GATTCGAGCGAAATAACTTCCTTAAATTTTGTGTGATGTATTTACCCGAATCAGGTATTCCGCTGCAACCGGATATATTA
TGGCAATTTAATCCGCAGGCAACAGCCGCATTATTTCTGGCGTTATTATCTCCCCGAATTTTACCGAGTGCGGCGGGGCA
TGAAAAGCGTGAGACTTTATTAGCGTGGTTACCTGAAAAACTCTTAACACTGATCAGTCTTGAGGGGTTACCTGAGCGTA
TTTTGCATGATGTGTATATGCATTGCAGTTATGCCGACATGGCGAAAAAACACACCATAAAGCGGAGTATTAATTTTCAT
TTACGTAAAACCATGCTCAAAAATGGATTATCTGATATGAATGAACTGCCACCATTGCGTAGCAAACCATTGATGTTAGT
GATTTTAGAGTGGTTTAACAGTGGTCATTCTATCTATCGAACGCACTCCAGTACTCTGCGGGCGGCCCGTGATCAGTTTT
CGACTCATGGTGTTGCGATTGCAGAGGCAACAGATGATATTACCCGAAAAGTATTTGATGATTTCACTGAGGTTAGCCGA
ACGGGGGCGGTCGAAACGATTATGGCGCTGGCACAACAGTTACGCCCGGATGTCATTTATTTTCCCAGTGTGGGGATGTT
CCCGATGACGGTGGCGTTGACTAATTTACGGTTGGCCCCCTTGCAGGTGATGGCGTTAGGCCACCCGGCAACCACCCATT
CTGACTATATTGATGCGGTGTTGGTGGAGGAAGACTATTTGGGCGATATCGCATGCTTCTCCGAGAAGGTGGTTTCTTTA
CCTAAAGATTGCCTACCTTATGTGCCGCCAGCCAATATCACTCAACCGGAACCCATACAGCAATTTGTTCAGCGCGAAGC
GGTACATATTGCCGTTTGTGCTTCAGCGATGAAAATTAACCCTCGTTTTTTAGCTGCCTGTGCCGAAATCGCCTTACGAT
CCCCGCTACCTATCATATTTCATTTTCTGGTTGGTTTTTGCTGGGGTATAACTCATCGGGTTATGGAAAAAGCGGTTAAT
GAGATGGTGACTTCAGCCAAAGTTTATGAACACTTAAATTATCAGAATTATTTACAGGTAATTAATCAGTGCGATCTGTT
TATTAATCCGTTTCCTTTCGGCAATACCAATGGCATCGTCGATACGGTGCGGCAGGGGTTGCCTGGTGTTTGTCTGAGTG
GGGAGGAAGTCCATGAGCATATTGATGAAGGGTTATTTCGCCGTCTGGGTTTGGCTGAAGAACTGATTACACATAATGTG
GAGCAATATATTACGGCGACGGTACGGTTAATTACGGATACAAACTGGCGCAATGGTCTACGCCGTCAGTTGTTACAAAT
TCAACCCGATAATGTGCTGTTTACCGGTAAACCCGAGCAATTCGGGCAGATCGTTCGTGCCTTGCTGGATAACGGCCATC
AGGATGTGAATTAG

Upstream 100 bases:

>100_bases
AACTCGAATTATTTTGGGTATATTAATTTAATACTATTAATGATACAGCGGGGCTTGGCTAAATAGAGGGCAAGCCCTGA
GCTGATAGGGAGATCGGGTA

Downstream 100 bases:

>100_bases
TATGCTGAAATGGCAGGCCACAACTGCATGTGAGGATCCCGCGGAGGGGGAAGAACTTCATCGCTTGGTTGCCGATATCC
CGATCGGCATTTTACAGCAC

Product: accessory processing protein; involved in the adherence of host cells

Products: NA

Alternate protein names: Adhesin Processing HmwC-Like Protein; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Repeat Domain Protein; Adhesin Processing Protein; TPR Repeat-Containing Protein; TPR Domain-Containing Protein; Glycosyltransferase

Number of amino acids: Translated: 617; Mature: 616

Protein sequence:

>617_residues
MADKSVELTPVVEAPVAFSLPYFEFLVCTRRYEDAGRLLILMLEKLDTQYGRWDVFSLNKEPIQQQEYYCNRLAAAIGCL
FSDPGFVISETGFLQLINFHRWIALIFAASTFGHADHVITNLNEAGEGCSHPLRFERNNFLKFCVMYLPESGIPLQPDIL
WQFNPQATAALFLALLSPRILPSAAGHEKRETLLAWLPEKLLTLISLEGLPERILHDVYMHCSYADMAKKHTIKRSINFH
LRKTMLKNGLSDMNELPPLRSKPLMLVILEWFNSGHSIYRTHSSTLRAARDQFSTHGVAIAEATDDITRKVFDDFTEVSR
TGAVETIMALAQQLRPDVIYFPSVGMFPMTVALTNLRLAPLQVMALGHPATTHSDYIDAVLVEEDYLGDIACFSEKVVSL
PKDCLPYVPPANITQPEPIQQFVQREAVHIAVCASAMKINPRFLAACAEIALRSPLPIIFHFLVGFCWGITHRVMEKAVN
EMVTSAKVYEHLNYQNYLQVINQCDLFINPFPFGNTNGIVDTVRQGLPGVCLSGEEVHEHIDEGLFRRLGLAEELITHNV
EQYITATVRLITDTNWRNGLRRQLLQIQPDNVLFTGKPEQFGQIVRALLDNGHQDVN

Sequences:

>Translated_617_residues
MADKSVELTPVVEAPVAFSLPYFEFLVCTRRYEDAGRLLILMLEKLDTQYGRWDVFSLNKEPIQQQEYYCNRLAAAIGCL
FSDPGFVISETGFLQLINFHRWIALIFAASTFGHADHVITNLNEAGEGCSHPLRFERNNFLKFCVMYLPESGIPLQPDIL
WQFNPQATAALFLALLSPRILPSAAGHEKRETLLAWLPEKLLTLISLEGLPERILHDVYMHCSYADMAKKHTIKRSINFH
LRKTMLKNGLSDMNELPPLRSKPLMLVILEWFNSGHSIYRTHSSTLRAARDQFSTHGVAIAEATDDITRKVFDDFTEVSR
TGAVETIMALAQQLRPDVIYFPSVGMFPMTVALTNLRLAPLQVMALGHPATTHSDYIDAVLVEEDYLGDIACFSEKVVSL
PKDCLPYVPPANITQPEPIQQFVQREAVHIAVCASAMKINPRFLAACAEIALRSPLPIIFHFLVGFCWGITHRVMEKAVN
EMVTSAKVYEHLNYQNYLQVINQCDLFINPFPFGNTNGIVDTVRQGLPGVCLSGEEVHEHIDEGLFRRLGLAEELITHNV
EQYITATVRLITDTNWRNGLRRQLLQIQPDNVLFTGKPEQFGQIVRALLDNGHQDVN
>Mature_616_residues
ADKSVELTPVVEAPVAFSLPYFEFLVCTRRYEDAGRLLILMLEKLDTQYGRWDVFSLNKEPIQQQEYYCNRLAAAIGCLF
SDPGFVISETGFLQLINFHRWIALIFAASTFGHADHVITNLNEAGEGCSHPLRFERNNFLKFCVMYLPESGIPLQPDILW
QFNPQATAALFLALLSPRILPSAAGHEKRETLLAWLPEKLLTLISLEGLPERILHDVYMHCSYADMAKKHTIKRSINFHL
RKTMLKNGLSDMNELPPLRSKPLMLVILEWFNSGHSIYRTHSSTLRAARDQFSTHGVAIAEATDDITRKVFDDFTEVSRT
GAVETIMALAQQLRPDVIYFPSVGMFPMTVALTNLRLAPLQVMALGHPATTHSDYIDAVLVEEDYLGDIACFSEKVVSLP
KDCLPYVPPANITQPEPIQQFVQREAVHIAVCASAMKINPRFLAACAEIALRSPLPIIFHFLVGFCWGITHRVMEKAVNE
MVTSAKVYEHLNYQNYLQVINQCDLFINPFPFGNTNGIVDTVRQGLPGVCLSGEEVHEHIDEGLFRRLGLAEELITHNVE
QYITATVRLITDTNWRNGLRRQLLQIQPDNVLFTGKPEQFGQIVRALLDNGHQDVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69702; Mature: 69571

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKSVELTPVVEAPVAFSLPYFEFLVCTRRYEDAGRLLILMLEKLDTQYGRWDVFSLNK
CCCCCCEECEEECCCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCC
EPIQQQEYYCNRLAAAIGCLFSDPGFVISETGFLQLINFHRWIALIFAASTFGHADHVIT
CHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
NLNEAGEGCSHPLRFERNNFLKFCVMYLPESGIPLQPDILWQFNPQATAALFLALLSPRI
CCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCC
LPSAAGHEKRETLLAWLPEKLLTLISLEGLPERILHDVYMHCSYADMAKKHTIKRSINFH
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LRKTMLKNGLSDMNELPPLRSKPLMLVILEWFNSGHSIYRTHSSTLRAARDQFSTHGVAI
HHHHHHHCCHHHHHHCCCCCCCCHHEEEEHHHCCCCCEEEEHHHHHHHHHHHHHHCCEEE
AEATDDITRKVFDDFTEVSRTGAVETIMALAQQLRPDVIYFPSVGMFPMTVALTNLRLAP
EHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCC
LQVMALGHPATTHSDYIDAVLVEEDYLGDIACFSEKVVSLPKDCLPYVPPANITQPEPIQ
EEEEEECCCCCCCCHHHHEEEECCHHCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHH
QFVQREAVHIAVCASAMKINPRFLAACAEIALRSPLPIIFHFLVGFCWGITHRVMEKAVN
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EMVTSAKVYEHLNYQNYLQVINQCDLFINPFPFGNTNGIVDTVRQGLPGVCLSGEEVHEH
HHHHHHHHHHHCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH
IDEGLFRRLGLAEELITHNVEQYITATVRLITDTNWRNGLRRQLLQIQPDNVLFTGKPEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCEEEECCCHH
FGQIVRALLDNGHQDVN
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ADKSVELTPVVEAPVAFSLPYFEFLVCTRRYEDAGRLLILMLEKLDTQYGRWDVFSLNK
CCCCCEECEEECCCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCC
EPIQQQEYYCNRLAAAIGCLFSDPGFVISETGFLQLINFHRWIALIFAASTFGHADHVIT
CHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
NLNEAGEGCSHPLRFERNNFLKFCVMYLPESGIPLQPDILWQFNPQATAALFLALLSPRI
CCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCC
LPSAAGHEKRETLLAWLPEKLLTLISLEGLPERILHDVYMHCSYADMAKKHTIKRSINFH
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LRKTMLKNGLSDMNELPPLRSKPLMLVILEWFNSGHSIYRTHSSTLRAARDQFSTHGVAI
HHHHHHHCCHHHHHHCCCCCCCCHHEEEEHHHCCCCCEEEEHHHHHHHHHHHHHHCCEEE
AEATDDITRKVFDDFTEVSRTGAVETIMALAQQLRPDVIYFPSVGMFPMTVALTNLRLAP
EHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCC
LQVMALGHPATTHSDYIDAVLVEEDYLGDIACFSEKVVSLPKDCLPYVPPANITQPEPIQ
EEEEEECCCCCCCCHHHHEEEECCHHCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHH
QFVQREAVHIAVCASAMKINPRFLAACAEIALRSPLPIIFHFLVGFCWGITHRVMEKAVN
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EMVTSAKVYEHLNYQNYLQVINQCDLFINPFPFGNTNGIVDTVRQGLPGVCLSGEEVHEH
HHHHHHHHHHHCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH
IDEGLFRRLGLAEELITHNVEQYITATVRLITDTNWRNGLRRQLLQIQPDNVLFTGKPEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCEEEECCCHH
FGQIVRALLDNGHQDVN
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA