Click here to switch to the map view.

The map label for this gene is yfeT [C]

Identifier: 51595214

GI number: 51595214

Start: 1040838

End: 1041683

Strand: Direct

Name: yfeT [C]

Synonym: YPTB0864

Alternate gene names: 51595214

Gene position: 1040838-1041683 (Clockwise)

Preceding gene: 51595204

Following gene: 51595215

Centisome position: 21.94

GC content: 52.25

Gene sequence:

>846_bases
TTGGGGAAAGGGATGAAACAAATCGACGAACGTTTGCGGGGACATTACACACAACTCACCCCGCAAGAGCAGCGCGTTGC
TGACTTTATTTTTGCCCATTTTGATGATCTGATCAGCTACAACAGTGCCGAACTGGCGCGATTGAGTGGTGTATCCAAGG
CTACGGTTAGCCGTCTGTTTAAACGCCTTGGCTACGGCAGTTATCGAGAAATGCGCGAAGAGGTGCGGGCCTTGCGCCAA
AGTGGTATGCCACTAACGGATAATCGCGATGCGGTGCAGGGCAATACCTTGCTGGCTCGCCACTATAAACAAGAAATGGC
GAACCTGGCGCATTGGGTCAATCAGTTGGATAGCCAGCAACTTACCGATGTGATCGATGCCATGGCACAAGCGCCGCGTA
TCTTGCTATTGGGGCTGCGTAACAGCTATCCGGTCGCGCTGCATTTACGCCAGCAGTTGTTGCAGGTACGCCAGCAGGTA
CATGTGATCCCACAGGCAGGGCAGACATTGGCTGAGGAATTGGTGGACATTACCCCGCATGATCTGGTGATTGTGGTGGC
ATTTCGCCGTCGGCCCAAGGCGATCCGCGAAATCCTATTACACATGCAGGGTCAGGGCGTACCGACATTGTTGATCTGTG
AGCCGCAAGCTCAGTCATTGCTGTCGCTGGCCCGTTGGCGCTTGACCACCCCACTGGACAGTGTTTCGGCTTTTGATAGC
TATTCTGCGGCGATGAGTTTAGTGAATTTACTGAGCAATGCATTACTGCATAAAATACTGGCAGAAGGCCGCCAGCGGAT
ACATCAAATTGCTAATTTGTATGATTCGTTGGGGGAGTTGGAATAG

Upstream 100 bases:

>100_bases
AGTGAAGAATCTCTTATTATCGGTTGGTGAGAGTGTGTTATGTTCCGCAAAAATGCCTATGCTGAAACGAGAGTTTCATT
AGCGTAATGAGTTTCACTGG

Downstream 100 bases:

>100_bases
TGTGAATCAGTCGTGTGCCGGACACGCCATTCTCTGCGGCACACGCTTTACTCTCCCGCCTATCCCCACCTTTCAGAGCA
CGTCATCGGTGTTTGTTATT

Product: rpiR family transcriptional regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; RpiR-Family Transcriptional Regulatory Protein; Sugar Isomerase; RpiR-Family Transcriptional Regulator; HTH Transcriptional Regulator Sugar Isomerasedomain; Transcriptional Regulator RpiR Family SIS Domain; RpiR Family Transcriptional Regulatory Protein; SIS Domain-Containing Protein; SIS Domain Protein; Transcriptional Regulator Rpir Family; Helix-Turn-Helix Domain RpiR Family

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MGKGMKQIDERLRGHYTQLTPQEQRVADFIFAHFDDLISYNSAELARLSGVSKATVSRLFKRLGYGSYREMREEVRALRQ
SGMPLTDNRDAVQGNTLLARHYKQEMANLAHWVNQLDSQQLTDVIDAMAQAPRILLLGLRNSYPVALHLRQQLLQVRQQV
HVIPQAGQTLAEELVDITPHDLVIVVAFRRRPKAIREILLHMQGQGVPTLLICEPQAQSLLSLARWRLTTPLDSVSAFDS
YSAAMSLVNLLSNALLHKILAEGRQRIHQIANLYDSLGELE

Sequences:

>Translated_281_residues
MGKGMKQIDERLRGHYTQLTPQEQRVADFIFAHFDDLISYNSAELARLSGVSKATVSRLFKRLGYGSYREMREEVRALRQ
SGMPLTDNRDAVQGNTLLARHYKQEMANLAHWVNQLDSQQLTDVIDAMAQAPRILLLGLRNSYPVALHLRQQLLQVRQQV
HVIPQAGQTLAEELVDITPHDLVIVVAFRRRPKAIREILLHMQGQGVPTLLICEPQAQSLLSLARWRLTTPLDSVSAFDS
YSAAMSLVNLLSNALLHKILAEGRQRIHQIANLYDSLGELE
>Mature_280_residues
GKGMKQIDERLRGHYTQLTPQEQRVADFIFAHFDDLISYNSAELARLSGVSKATVSRLFKRLGYGSYREMREEVRALRQS
GMPLTDNRDAVQGNTLLARHYKQEMANLAHWVNQLDSQQLTDVIDAMAQAPRILLLGLRNSYPVALHLRQQLLQVRQQVH
VIPQAGQTLAEELVDITPHDLVIVVAFRRRPKAIREILLHMQGQGVPTLLICEPQAQSLLSLARWRLTTPLDSVSAFDSY
SAAMSLVNLLSNALLHKILAEGRQRIHQIANLYDSLGELE

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31802; Mature: 31671

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKGMKQIDERLRGHYTQLTPQEQRVADFIFAHFDDLISYNSAELARLSGVSKATVSRLF
CCCCHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHH
KRLGYGSYREMREEVRALRQSGMPLTDNRDAVQGNTLLARHYKQEMANLAHWVNQLDSQQ
HHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LTDVIDAMAQAPRILLLGLRNSYPVALHLRQQLLQVRQQVHVIPQAGQTLAEELVDITPH
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
DLVIVVAFRRRPKAIREILLHMQGQGVPTLLICEPQAQSLLSLARWRLTTPLDSVSAFDS
HHEEEHHHHHCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHH
YSAAMSLVNLLSNALLHKILAEGRQRIHQIANLYDSLGELE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GKGMKQIDERLRGHYTQLTPQEQRVADFIFAHFDDLISYNSAELARLSGVSKATVSRLF
CCCHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHH
KRLGYGSYREMREEVRALRQSGMPLTDNRDAVQGNTLLARHYKQEMANLAHWVNQLDSQQ
HHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LTDVIDAMAQAPRILLLGLRNSYPVALHLRQQLLQVRQQVHVIPQAGQTLAEELVDITPH
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
DLVIVVAFRRRPKAIREILLHMQGQGVPTLLICEPQAQSLLSLARWRLTTPLDSVSAFDS
HHEEEHHHHHCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHH
YSAAMSLVNLLSNALLHKILAEGRQRIHQIANLYDSLGELE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA