| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yddG
Identifier: 51595068
GI number: 51595068
Start: 863522
End: 864409
Strand: Reverse
Name: yddG
Synonym: YPTB0718
Alternate gene names: 51595068
Gene position: 864409-863522 (Counterclockwise)
Preceding gene: 51595069
Following gene: 51595061
Centisome position: 18.22
GC content: 54.05
Gene sequence:
>888_bases ATGAACCGCCTCCCAACCCTGTATGGCATTATTGCGATTTTACTGTGGAGCATGAGTGTCGCCTTAACACGTGGGCTGGC CGAAGCACTGGGGCCATTCGGTGCCGGAGCGGCTATCTACAGTGTCAGTGGGATTCTGGTATGGCTAGTGGCAGGTAAGC CTAGAGTACGTGGGCAGCATCCCGCTTATCTGTATGGCTGCGGTTTACTGTTTGTGGTGTATATGGTGGCCTTCGCTCTG GCAATCGGTATGGCTAATGATCGCCAGCAAACACTGGAGATAGGCTTAATCAATTACCTATGGCCGAGCCTAACGCTGCT ATTGGCGGTACCGTTGCTGAAACTCCGCGCCCGTTGGTGGTTATGGCCGGGGGCGGCTCTCGCTCTATTTGGTGTTATTT GGGTGGTCAGTGGTGGTGAAGGGCTGGACGTTAAAACGCTCGCCGTAAATATCAGCAGCAACCCGCTGGCGTACAGCCTG GCGCTGATTGCAGCATTCACCTGGGCGGGCTACTCCAACTTAGTACGGTTATATAGCCAAGGGCCAGGGGCGCTGCCACT GTTTTTAATCGCCTGCGCCCTGTGCCTGTGGTTGATGTTCTTTATGTGGACTCCGGGCAAATTGCACTTTACCCCACGAG CCATATTTGAATTGTTACTCATGGGCGCGAATACCGCACTGGCCTACCAATGCTGGGATAGCGCAATGAAAAAAGGCAAC GCCACACTGGTCGCGGCCCTATCCTATTTCACGCCATTGTTATCAATATTGATCGCCAGCGTGTGGCTCAATACCTTGCC TTCTGCGGCTTTCTGGCCTGGCGTTGCCATGGTTGTAGCAGGTTCGTTGCTATGCTGGTCAGCCAGCCGAAATCCCCTTC GTACTTGA
Upstream 100 bases:
>100_bases CAACGTATTGAATACATAACCCCTGCAACTTGAAGTATGACAAGTATAAGAAGATGATATTCTTCCCCCCTTTAGCATTG CACAAGGAAGATGCCCCCTA
Downstream 100 bases:
>100_bases AGCCGTAGGGTTGTTAGTGGTGTCCGCTTACCCGAATCACTTACTTATCTAAGCCCATCGGGGCCACTCTCTTACTGCCT ACCTGCAACACCCTTCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MNRLPTLYGIIAILLWSMSVALTRGLAEALGPFGAGAAIYSVSGILVWLVAGKPRVRGQHPAYLYGCGLLFVVYMVAFAL AIGMANDRQQTLEIGLINYLWPSLTLLLAVPLLKLRARWWLWPGAALALFGVIWVVSGGEGLDVKTLAVNISSNPLAYSL ALIAAFTWAGYSNLVRLYSQGPGALPLFLIACALCLWLMFFMWTPGKLHFTPRAIFELLLMGANTALAYQCWDSAMKKGN ATLVAALSYFTPLLSILIASVWLNTLPSAAFWPGVAMVVAGSLLCWSASRNPLRT
Sequences:
>Translated_295_residues MNRLPTLYGIIAILLWSMSVALTRGLAEALGPFGAGAAIYSVSGILVWLVAGKPRVRGQHPAYLYGCGLLFVVYMVAFAL AIGMANDRQQTLEIGLINYLWPSLTLLLAVPLLKLRARWWLWPGAALALFGVIWVVSGGEGLDVKTLAVNISSNPLAYSL ALIAAFTWAGYSNLVRLYSQGPGALPLFLIACALCLWLMFFMWTPGKLHFTPRAIFELLLMGANTALAYQCWDSAMKKGN ATLVAALSYFTPLLSILIASVWLNTLPSAAFWPGVAMVVAGSLLCWSASRNPLRT >Mature_295_residues MNRLPTLYGIIAILLWSMSVALTRGLAEALGPFGAGAAIYSVSGILVWLVAGKPRVRGQHPAYLYGCGLLFVVYMVAFAL AIGMANDRQQTLEIGLINYLWPSLTLLLAVPLLKLRARWWLWPGAALALFGVIWVVSGGEGLDVKTLAVNISSNPLAYSL ALIAAFTWAGYSNLVRLYSQGPGALPLFLIACALCLWLMFFMWTPGKLHFTPRAIFELLLMGANTALAYQCWDSAMKKGN ATLVAALSYFTPLLSILIASVWLNTLPSAAFWPGVAMVVAGSLLCWSASRNPLRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DUF6 domain [H]
Homologues:
Organism=Escherichia coli, GI145693132, Length=286, Percent_Identity=41.6083916083916, Blast_Score=220, Evalue=8e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31942; Mature: 31942
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLPTLYGIIAILLWSMSVALTRGLAEALGPFGAGAAIYSVSGILVWLVAGKPRVRGQH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEECCCCCCCCCC PAYLYGCGLLFVVYMVAFALAIGMANDRQQTLEIGLINYLWPSLTLLLAVPLLKLRARWW CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWPGAALALFGVIWVVSGGEGLDVKTLAVNISSNPLAYSLALIAAFTWAGYSNLVRLYSQ CCCCHHHHHHHHHHHEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHC GPGALPLFLIACALCLWLMFFMWTPGKLHFTPRAIFELLLMGANTALAYQCWDSAMKKGN CCCCHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCC ATLVAALSYFTPLLSILIASVWLNTLPSAAFWPGVAMVVAGSLLCWSASRNPLRT HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCC >Mature Secondary Structure MNRLPTLYGIIAILLWSMSVALTRGLAEALGPFGAGAAIYSVSGILVWLVAGKPRVRGQH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEECCCCCCCCCC PAYLYGCGLLFVVYMVAFALAIGMANDRQQTLEIGLINYLWPSLTLLLAVPLLKLRARWW CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWPGAALALFGVIWVVSGGEGLDVKTLAVNISSNPLAYSLALIAAFTWAGYSNLVRLYSQ CCCCHHHHHHHHHHHEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHC GPGALPLFLIACALCLWLMFFMWTPGKLHFTPRAIFELLLMGANTALAYQCWDSAMKKGN CCCCHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCC ATLVAALSYFTPLLSILIASVWLNTLPSAAFWPGVAMVVAGSLLCWSASRNPLRT HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 1834669; 7567469 [H]