| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is imp
Identifier: 51594987
GI number: 51594987
Start: 752607
End: 754949
Strand: Reverse
Name: imp
Synonym: YPTB0636
Alternate gene names: 51594987
Gene position: 754949-752607 (Counterclockwise)
Preceding gene: 51594989
Following gene: 51594986
Centisome position: 15.91
GC content: 47.84
Gene sequence:
>2343_bases ATGAAAAAAAGATTCCCAACACTGCTGGCCACATTGATTTGGACGGCACTATATAGTCAACACACACTGGCAGACCTTGC GGAGCAATGTATGCTCGGTGTCCCAACCTATGATCAACCACTGGTCACAGGCGATCCGAATCAACTGCCGGTCCGTATTA ATGCGGATAAAACCGAAGCAAACTATCCGGATAATGCCTTGTTTACTGGCAATGTTATTGTTCAGCAAGGCAATAGCACC CTAACAGCGAACCAAGTGGAACTGACACAGGTACAGAAACCCGGTGAAGTCATTCCCCTTCGTACCGTTACCGCCACCGG CGATGTCAACTACGACGATCCGCAAATCAAGCTGAAAGGACCAAAAGGTTGGTCAAATCTGAACACCAAAGATACTGATA TAGACAAAGGTAAATATCAGATGGTGGGCCGTCAGGGCCGTGGTGATGCAGATTTGATGAAATTGCGCGATCAGAGCCGC TACACCATTTTGAAAAACGGCACATTTACCTCTTGCCTACCCGGAGATAACAGTTGGAGCGTGGTTGGCTCAGAGGTCAT TCATGACCGCGAAGAACAAGTGGTTGAAGTTTGGAATGCTCGTTTCAAGATTGGCAAAGTCCCGGTGTTTTACAGCCCTT ATATGCAATTGCCAGTTGGCGATAAACGCCGTTCGGGGTTCTTGATCCCAAATGCGAAATTTACCAGTAACAATGGTTTT GAGTTTTTACTCCCTTATTACTGGAATATTGCCCCCAACTTTGATGCCACCATTACGCCACACTATATGGAAAGGCGCGG GTTGCAATGGCAAAACGAATTCCGCTATTTGCTGGCGCCGGGTTCAGGCACCATGGCATTAGACTGGTTGCCCAATGACC GTATCTATACGGGGCCTGATGGCACAGATAAAAATGCCACCCGCTGGCTATACTACTGGGGCCATTCCGGTGTAATGGAT CAAGTTTGGCGCTTCAACATCAACTATACCCGTGTCAGCGACCCCGCTTACTTTACGGATTTAACCTCTCAGTACGGTTC GACAACCGATGGCTACGCGACACAAATATTCACCGCCGGTTATGCCAATGAAAACTGGAATGCGACGCTGTCTTCCAAGC AGTTCCAGGTATTTACTGCTGCAGGTAACAGTAATGCCTACCGTGCCCAGCCACAGTTGGACATGAACTACTACAAAAAC GATGTTGGTCCATTTGATATGCATGTCTATGGTCAGGCGGCCAAATTCACCAGTGTCAATCCAACTAACCCGGAAGCCAG CCGTTTCCATATTGAACCTACGGTTAACCTGCCCTTATCCAATAGCTGGGGAAGCATAAATACAGAAGCCAAACTGTTGG CCACCCACTATCAACAGGATATTCCGGCCAGTTTTGCTGACAATGCTAGCAACCCCAAACTGAAAGACTCAGTAAACCGG GTCCTACCACAGTTTAAAGTGGATGGTAAGGTGGTATTCGATAGGTCAATGGACTGGGCGACGGGCTTTACGCAGACATT GGAGCCTCGCGCACAGTATCTCTACGTCCCTTACCGGAACCAAGATGATATCTATATATATGACACCACGTTGATGCAGT CGGATTACTCTGGTCTGTTCCGTGATCGTACCTATAGTGGCTTGGACCGTATTGCATCGGCTAATCAGGTATCTACCGGT TTAACCTCTCGCATATATGATGATGCTCGGGTTGAACGTTTTAATGTTTCTGTAGGTCAAATCTATTACTTCAGTCGATC ACGCACAGGTAATACCGAAGCCATCGATAACAGTAACGATACAGGGAGCCTGGTTTGGGCTGGTGATACTTTTTGGCGGA TCAACGATCAACTGGGCCTGAAGGGCGGCGCACAGTATGATACTCGGCTGGGAAGTTTGACCTTAGGTAACGCTATAATG GAATATAGAAGAGACGCTGATCGTATGATTCAATTGAATTACCGCTACGCGAGCCCAAAATATATTCAGGCGGCTGTCCC TAAAGTATACAACCCTGACTACCAGCAAGGCATCTCTCAGGTAGGTACCACGGCCAGTTGGCCAATTGCTGACCGCTGGG CGATCGTCGGGGCGTATTATTACGATACCAAAGCCAAACAACCTGCCAGCCAGTTAGTTGGCTTGCAATACAACACCTGT TGTTGGGCGGTAAACCTTGGCTATGAACGCAAAATAACTGGCTGGAATGCACAAGGCCAAACCAGTAAGTACGACAACAA AATAGGCTTTAACATCGAATTACGTGGTTTGAGCGGTGGTCATAGCCTTGGTACTGCTCAAATGCTGAACTCGGGCATTC TGCCTTATCAAAGTGCATTCTGA
Upstream 100 bases:
>100_bases AAACGGCCAGATTTAACACTAGCGCAACTGTGATGAGTGATATAGTCTCAAACCGTTTGCCGGCATGATGCCCCCCGATG ACGGAACACCAAAACCACGT
Downstream 100 bases:
>100_bases TACTGTTTAACACACTGAATACAGTGAATCTTAACCCGCGATAGCGGATTACATAAATGGAAAAGGTATGAAGAACTGGA GAACGCTTATTCTCGGATTG
Product: organic solvent tolerance protein
Products: NA
Alternate protein names: Organic solvent tolerance protein [H]
Number of amino acids: Translated: 780; Mature: 780
Protein sequence:
>780_residues MKKRFPTLLATLIWTALYSQHTLADLAEQCMLGVPTYDQPLVTGDPNQLPVRINADKTEANYPDNALFTGNVIVQQGNST LTANQVELTQVQKPGEVIPLRTVTATGDVNYDDPQIKLKGPKGWSNLNTKDTDIDKGKYQMVGRQGRGDADLMKLRDQSR YTILKNGTFTSCLPGDNSWSVVGSEVIHDREEQVVEVWNARFKIGKVPVFYSPYMQLPVGDKRRSGFLIPNAKFTSNNGF EFLLPYYWNIAPNFDATITPHYMERRGLQWQNEFRYLLAPGSGTMALDWLPNDRIYTGPDGTDKNATRWLYYWGHSGVMD QVWRFNINYTRVSDPAYFTDLTSQYGSTTDGYATQIFTAGYANENWNATLSSKQFQVFTAAGNSNAYRAQPQLDMNYYKN DVGPFDMHVYGQAAKFTSVNPTNPEASRFHIEPTVNLPLSNSWGSINTEAKLLATHYQQDIPASFADNASNPKLKDSVNR VLPQFKVDGKVVFDRSMDWATGFTQTLEPRAQYLYVPYRNQDDIYIYDTTLMQSDYSGLFRDRTYSGLDRIASANQVSTG LTSRIYDDARVERFNVSVGQIYYFSRSRTGNTEAIDNSNDTGSLVWAGDTFWRINDQLGLKGGAQYDTRLGSLTLGNAIM EYRRDADRMIQLNYRYASPKYIQAAVPKVYNPDYQQGISQVGTTASWPIADRWAIVGAYYYDTKAKQPASQLVGLQYNTC CWAVNLGYERKITGWNAQGQTSKYDNKIGFNIELRGLSGGHSLGTAQMLNSGILPYQSAF
Sequences:
>Translated_780_residues MKKRFPTLLATLIWTALYSQHTLADLAEQCMLGVPTYDQPLVTGDPNQLPVRINADKTEANYPDNALFTGNVIVQQGNST LTANQVELTQVQKPGEVIPLRTVTATGDVNYDDPQIKLKGPKGWSNLNTKDTDIDKGKYQMVGRQGRGDADLMKLRDQSR YTILKNGTFTSCLPGDNSWSVVGSEVIHDREEQVVEVWNARFKIGKVPVFYSPYMQLPVGDKRRSGFLIPNAKFTSNNGF EFLLPYYWNIAPNFDATITPHYMERRGLQWQNEFRYLLAPGSGTMALDWLPNDRIYTGPDGTDKNATRWLYYWGHSGVMD QVWRFNINYTRVSDPAYFTDLTSQYGSTTDGYATQIFTAGYANENWNATLSSKQFQVFTAAGNSNAYRAQPQLDMNYYKN DVGPFDMHVYGQAAKFTSVNPTNPEASRFHIEPTVNLPLSNSWGSINTEAKLLATHYQQDIPASFADNASNPKLKDSVNR VLPQFKVDGKVVFDRSMDWATGFTQTLEPRAQYLYVPYRNQDDIYIYDTTLMQSDYSGLFRDRTYSGLDRIASANQVSTG LTSRIYDDARVERFNVSVGQIYYFSRSRTGNTEAIDNSNDTGSLVWAGDTFWRINDQLGLKGGAQYDTRLGSLTLGNAIM EYRRDADRMIQLNYRYASPKYIQAAVPKVYNPDYQQGISQVGTTASWPIADRWAIVGAYYYDTKAKQPASQLVGLQYNTC CWAVNLGYERKITGWNAQGQTSKYDNKIGFNIELRGLSGGHSLGTAQMLNSGILPYQSAF >Mature_780_residues MKKRFPTLLATLIWTALYSQHTLADLAEQCMLGVPTYDQPLVTGDPNQLPVRINADKTEANYPDNALFTGNVIVQQGNST LTANQVELTQVQKPGEVIPLRTVTATGDVNYDDPQIKLKGPKGWSNLNTKDTDIDKGKYQMVGRQGRGDADLMKLRDQSR YTILKNGTFTSCLPGDNSWSVVGSEVIHDREEQVVEVWNARFKIGKVPVFYSPYMQLPVGDKRRSGFLIPNAKFTSNNGF EFLLPYYWNIAPNFDATITPHYMERRGLQWQNEFRYLLAPGSGTMALDWLPNDRIYTGPDGTDKNATRWLYYWGHSGVMD QVWRFNINYTRVSDPAYFTDLTSQYGSTTDGYATQIFTAGYANENWNATLSSKQFQVFTAAGNSNAYRAQPQLDMNYYKN DVGPFDMHVYGQAAKFTSVNPTNPEASRFHIEPTVNLPLSNSWGSINTEAKLLATHYQQDIPASFADNASNPKLKDSVNR VLPQFKVDGKVVFDRSMDWATGFTQTLEPRAQYLYVPYRNQDDIYIYDTTLMQSDYSGLFRDRTYSGLDRIASANQVSTG LTSRIYDDARVERFNVSVGQIYYFSRSRTGNTEAIDNSNDTGSLVWAGDTFWRINDQLGLKGGAQYDTRLGSLTLGNAIM EYRRDADRMIQLNYRYASPKYIQAAVPKVYNPDYQQGISQVGTTASWPIADRWAIVGAYYYDTKAKQPASQLVGLQYNTC CWAVNLGYERKITGWNAQGQTSKYDNKIGFNIELRGLSGGHSLGTAQMLNSGILPYQSAF
Specific function: Together with lptE, is involved in the assembly of LPS in the outer leaflet of the outer membrane. Determines N-hexane tolerance and is involved in outer membrane permeability. Essential for envelope biogenesis [H]
COG id: COG1452
COG function: function code M; Organic solvent tolerance protein OstA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lptD family [H]
Homologues:
Organism=Escherichia coli, GI1786239, Length=786, Percent_Identity=66.6666666666667, Blast_Score=1105, Evalue=0.0,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020889 - InterPro: IPR005653 - InterPro: IPR007543 [H]
Pfam domain/function: PF03968 OstA; PF04453 OstA_C [H]
EC number: NA
Molecular weight: Translated: 87964; Mature: 87964
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRFPTLLATLIWTALYSQHTLADLAEQCMLGVPTYDQPLVTGDPNQLPVRINADKTEA CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEEECCCCCC NYPDNALFTGNVIVQQGNSTLTANQVELTQVQKPGEVIPLRTVTATGDVNYDDPQIKLKG CCCCCEEEECEEEEECCCCEEEECEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEC PKGWSNLNTKDTDIDKGKYQMVGRQGRGDADLMKLRDQSRYTILKNGTFTSCLPGDNSWS CCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCEEEEECCCEEEECCCCCCCE VVGSEVIHDREEQVVEVWNARFKIGKVPVFYSPYMQLPVGDKRRSGFLIPNAKFTSNNGF EECHHHHHCHHHHHHHHHCCEEEECCCEEEECCEEECCCCCCCCCCEECCCCEEECCCCC EFLLPYYWNIAPNFDATITPHYMERRGLQWQNEFRYLLAPGSGTMALDWLPNDRIYTGPD EEEEEEEEECCCCCCCEECCHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCEEECCC GTDKNATRWLYYWGHSGVMDQVWRFNINYTRVSDPAYFTDLTSQYGSTTDGYATQIFTAG CCCCCCEEEEEEECCCCHHHHHEEEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEC YANENWNATLSSKQFQVFTAAGNSNAYRAQPQLDMNYYKNDVGPFDMHVYGQAAKFTSVN CCCCCCCEEECCCEEEEEEEECCCCCEECCCCCCHHHHHCCCCCEEEEEEECCEEECCCC PTNPEASRFHIEPTVNLPLSNSWGSINTEAKLLATHYQQDIPASFADNASNPKLKDSVNR CCCCCCCEEEECEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHH VLPQFKVDGKVVFDRSMDWATGFTQTLEPRAQYLYVPYRNQDDIYIYDTTLMQSDYSGLF HCCCEECCCEEEEECCCCCCCCCHHHCCCCCCEEEEEECCCCCEEEEEEEEECCCCCHHH RDRTYSGLDRIASANQVSTGLTSRIYDDARVERFNVSVGQIYYFSRSRTGNTEAIDNSND HCCCHHHHHHHHCCCHHHHCHHHHHHCCCCEEEEECEEEEEEEEECCCCCCCCCCCCCCC TGSLVWAGDTFWRINDQLGLKGGAQYDTRLGSLTLGNAIMEYRRDADRMIQLNYRYASPK CCEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCC YIQAAVPKVYNPDYQQGISQVGTTASWPIADRWAIVGAYYYDTKAKQPASQLVGLQYNTC HHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHCCCEECCE CWAVNLGYERKITGWNAQGQTSKYDNKIGFNIELRGLSGGHSLGTAQMLNSGILPYQSAF EEEEECCCEEEECCCCCCCCCCCCCCEECEEEEEEECCCCCCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure MKKRFPTLLATLIWTALYSQHTLADLAEQCMLGVPTYDQPLVTGDPNQLPVRINADKTEA CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEEECCCCCC NYPDNALFTGNVIVQQGNSTLTANQVELTQVQKPGEVIPLRTVTATGDVNYDDPQIKLKG CCCCCEEEECEEEEECCCCEEEECEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEC PKGWSNLNTKDTDIDKGKYQMVGRQGRGDADLMKLRDQSRYTILKNGTFTSCLPGDNSWS CCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCEEEEECCCEEEECCCCCCCE VVGSEVIHDREEQVVEVWNARFKIGKVPVFYSPYMQLPVGDKRRSGFLIPNAKFTSNNGF EECHHHHHCHHHHHHHHHCCEEEECCCEEEECCEEECCCCCCCCCCEECCCCEEECCCCC EFLLPYYWNIAPNFDATITPHYMERRGLQWQNEFRYLLAPGSGTMALDWLPNDRIYTGPD EEEEEEEEECCCCCCCEECCHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCEEECCC GTDKNATRWLYYWGHSGVMDQVWRFNINYTRVSDPAYFTDLTSQYGSTTDGYATQIFTAG CCCCCCEEEEEEECCCCHHHHHEEEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEC YANENWNATLSSKQFQVFTAAGNSNAYRAQPQLDMNYYKNDVGPFDMHVYGQAAKFTSVN CCCCCCCEEECCCEEEEEEEECCCCCEECCCCCCHHHHHCCCCCEEEEEEECCEEECCCC PTNPEASRFHIEPTVNLPLSNSWGSINTEAKLLATHYQQDIPASFADNASNPKLKDSVNR CCCCCCCEEEECEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHH VLPQFKVDGKVVFDRSMDWATGFTQTLEPRAQYLYVPYRNQDDIYIYDTTLMQSDYSGLF HCCCEECCCEEEEECCCCCCCCCHHHCCCCCCEEEEEECCCCCEEEEEEEEECCCCCHHH RDRTYSGLDRIASANQVSTGLTSRIYDDARVERFNVSVGQIYYFSRSRTGNTEAIDNSND HCCCHHHHHHHHCCCHHHHCHHHHHHCCCCEEEEECEEEEEEEEECCCCCCCCCCCCCCC TGSLVWAGDTFWRINDQLGLKGGAQYDTRLGSLTLGNAIMEYRRDADRMIQLNYRYASPK CCEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCC YIQAAVPKVYNPDYQQGISQVGTTASWPIADRWAIVGAYYYDTKAKQPASQLVGLQYNTC HHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHCCCEECCE CWAVNLGYERKITGWNAQGQTSKYDNKIGFNIELRGLSGGHSLGTAQMLNSGILPYQSAF EEEEECCCEEEECCCCCCCCCCCCCCEECEEEEEEECCCCCCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA