| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is yjgN [H]
Identifier: 51594890
GI number: 51594890
Start: 637364
End: 638560
Strand: Reverse
Name: yjgN [H]
Synonym: YPTB0539
Alternate gene names: 51594890
Gene position: 638560-637364 (Counterclockwise)
Preceding gene: 51594893
Following gene: 51594889
Centisome position: 13.46
GC content: 44.11
Gene sequence:
>1197_bases ATGGCAGATAACGCCTCACAAAATAAATCGCTACATAGAATGGCCTTCAAAGGCGAAGGTGGCGAGTATTTCTCTATCTG GTTAGTGAATTTATTACTAACGATAATTACACTGGGTGTTTATTCTGCCTGGGCTACCGTACGTCGTCGCCGTTACTTTT ATGGCAATACTGAGCTAAACGGTGATCGTTTTGATTATCACGCAGAGCCAATCGAGATCCTTAAAGGGCGCTTGATGGTT ATTGGTGGTGTGATTTTATTCTATATATTATTAGCAATTGCCCCAACACTTGGCCTTTTGGTTGCACTGGTGTTGCTGGC ATTGATTCCATGGATTATTATCCGTAGCTGGCGCTACAATGCCATTATGACCAGCTATCGTGGTGTTCGTTTTAATTATC ACTGCCAGACTGGACAGGCTTATTGGGCGTTACTGTTTTGCCCACTGCTGTTAATTCTGGGGCTCTATGCCGTTATGATC GTCATGGCGATGTTTCTAGGTTCTGTTGCCAGCACCCCTTCTACGGCTATAACACTCATTGTTGTTTCTGCGATTCTTCT GGTCCCGCTGCTGGCAGTGATCAATGGCATTGTGAGCACGTTGCAACACAGCCTGTACGTTAATAACCTCTCTTTTGGTA ATTCATCTTTTATTAGTACGTTAAAAAAATCAGCATTTATTAAAATCGCCTTTTTCAGTGTGTTGATTTTTATCCCCTTC TTTTTTGTTGCTATGATGTTCGCAGGTGCGTTTTTTGCCGATCTGTTCCAATCTGCCCTGAATGGTTCCATCGCCAACGA AAATAAGACAGCTATGCTGATAATTCAGAATTTCAGCAACCTGCTATTCATGATGCTGATATTGCTACTCGGCACCATGG TTTCCAGCAGCTACCGCATCGTTGCCCAACGTAATTACCTGTTTAGTCAAACAACATTACAAGGTGACATCAAGCTACGT TCTTCCATGAAACTCCTGTCTTATATGGGCCTGTTAATGACCAACAGCCTGATCACTGTGTGCTCATTGGGGCTTGCCAC ACCAATTGCAGAAGTACGCCATGCACGCTATATGGCTAATGCAACTGAGATTGAAGGTGACTTGTCTTTACTGAATATCC ACGCTCATCAGGACACAGCGAATAGCGCCCTCGCCGAAGAAGCAGTACAAGCACTCGATCTGGGCACTGGCTTTTGA
Upstream 100 bases:
>100_bases TTGTGATTATTATGTGGATATCGTCTATCTCCATAACACCTATTGTGAATAAAAATAGGAACATATAGGCAAATTATATT ACCTATAGGATGAAAGGTTT
Downstream 100 bases:
>100_bases GTAGCTATCAGTGTTTGAGTAACTATCAGTGTTTGAGTAGCTATCAGTGATCGTTGAAGGATATTATCAGTACCCAGGTC GGGCCGCCCGCGAGGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MADNASQNKSLHRMAFKGEGGEYFSIWLVNLLLTIITLGVYSAWATVRRRRYFYGNTELNGDRFDYHAEPIEILKGRLMV IGGVILFYILLAIAPTLGLLVALVLLALIPWIIIRSWRYNAIMTSYRGVRFNYHCQTGQAYWALLFCPLLLILGLYAVMI VMAMFLGSVASTPSTAITLIVVSAILLVPLLAVINGIVSTLQHSLYVNNLSFGNSSFISTLKKSAFIKIAFFSVLIFIPF FFVAMMFAGAFFADLFQSALNGSIANENKTAMLIIQNFSNLLFMMLILLLGTMVSSSYRIVAQRNYLFSQTTLQGDIKLR SSMKLLSYMGLLMTNSLITVCSLGLATPIAEVRHARYMANATEIEGDLSLLNIHAHQDTANSALAEEAVQALDLGTGF
Sequences:
>Translated_398_residues MADNASQNKSLHRMAFKGEGGEYFSIWLVNLLLTIITLGVYSAWATVRRRRYFYGNTELNGDRFDYHAEPIEILKGRLMV IGGVILFYILLAIAPTLGLLVALVLLALIPWIIIRSWRYNAIMTSYRGVRFNYHCQTGQAYWALLFCPLLLILGLYAVMI VMAMFLGSVASTPSTAITLIVVSAILLVPLLAVINGIVSTLQHSLYVNNLSFGNSSFISTLKKSAFIKIAFFSVLIFIPF FFVAMMFAGAFFADLFQSALNGSIANENKTAMLIIQNFSNLLFMMLILLLGTMVSSSYRIVAQRNYLFSQTTLQGDIKLR SSMKLLSYMGLLMTNSLITVCSLGLATPIAEVRHARYMANATEIEGDLSLLNIHAHQDTANSALAEEAVQALDLGTGF >Mature_397_residues ADNASQNKSLHRMAFKGEGGEYFSIWLVNLLLTIITLGVYSAWATVRRRRYFYGNTELNGDRFDYHAEPIEILKGRLMVI GGVILFYILLAIAPTLGLLVALVLLALIPWIIIRSWRYNAIMTSYRGVRFNYHCQTGQAYWALLFCPLLLILGLYAVMIV MAMFLGSVASTPSTAITLIVVSAILLVPLLAVINGIVSTLQHSLYVNNLSFGNSSFISTLKKSAFIKIAFFSVLIFIPFF FVAMMFAGAFFADLFQSALNGSIANENKTAMLIIQNFSNLLFMMLILLLGTMVSSSYRIVAQRNYLFSQTTLQGDIKLRS SMKLLSYMGLLMTNSLITVCSLGLATPIAEVRHARYMANATEIEGDLSLLNIHAHQDTANSALAEEAVQALDLGTGF
Specific function: Unknown
COG id: COG4269
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48995003, Length=362, Percent_Identity=32.3204419889503, Blast_Score=119, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010295 [H]
Pfam domain/function: PF05987 DUF898 [H]
EC number: NA
Molecular weight: Translated: 44065; Mature: 43934
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNASQNKSLHRMAFKGEGGEYFSIWLVNLLLTIITLGVYSAWATVRRRRYFYGNTELN CCCCCCCCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC GDRFDYHAEPIEILKGRLMVIGGVILFYILLAIAPTLGLLVALVLLALIPWIIIRSWRYN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AIMTSYRGVRFNYHCQTGQAYWALLFCPLLLILGLYAVMIVMAMFLGSVASTPSTAITLI HHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VVSAILLVPLLAVINGIVSTLQHSLYVNNLSFGNSSFISTLKKSAFIKIAFFSVLIFIPF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FFVAMMFAGAFFADLFQSALNGSIANENKTAMLIIQNFSNLLFMMLILLLGTMVSSSYRI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEE VAQRNYLFSQTTLQGDIKLRSSMKLLSYMGLLMTNSLITVCSLGLATPIAEVRHARYMAN EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ATEIEGDLSLLNIHAHQDTANSALAEEAVQALDLGTGF CHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ADNASQNKSLHRMAFKGEGGEYFSIWLVNLLLTIITLGVYSAWATVRRRRYFYGNTELN CCCCCCCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC GDRFDYHAEPIEILKGRLMVIGGVILFYILLAIAPTLGLLVALVLLALIPWIIIRSWRYN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AIMTSYRGVRFNYHCQTGQAYWALLFCPLLLILGLYAVMIVMAMFLGSVASTPSTAITLI HHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VVSAILLVPLLAVINGIVSTLQHSLYVNNLSFGNSSFISTLKKSAFIKIAFFSVLIFIPF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FFVAMMFAGAFFADLFQSALNGSIANENKTAMLIIQNFSNLLFMMLILLLGTMVSSSYRI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEE VAQRNYLFSQTTLQGDIKLRSSMKLLSYMGLLMTNSLITVCSLGLATPIAEVRHARYMAN EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ATEIEGDLSLLNIHAHQDTANSALAEEAVQALDLGTGF CHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 8253666 [H]