| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is phnN
Identifier: 51594861
GI number: 51594861
Start: 599229
End: 599810
Strand: Reverse
Name: phnN
Synonym: YPTB0509
Alternate gene names: 51594861
Gene position: 599810-599229 (Counterclockwise)
Preceding gene: 51594862
Following gene: 51594860
Centisome position: 12.64
GC content: 52.58
Gene sequence:
>582_bases ATGGCGCGTTTAATCTATCTGATGGGGCCTTCTGGCGCGGGTAAGGATTGCCTGTTATCTGCACTGCGAAACGCCACACC GCAAAATAGGGTGGTGGCACATCGCTATATTACTCGCCCGGCAGATGCGGGAGCAGAGAACCATGTGGCGCTGAGCAAAC AGGAATTTATCCAGCGGGCAGAACAGGGCTTATTTGCGCTGCACTGGCAGGCACATCAGCACTGCTATGCCATTGGGATT GAAATCAACCTCTGGCTGCAACACGGGTTAGACGTGTTAGTCAATGGCTCCAGAGCGTATTTACCTGAAGCTCAACGCCG CTATCGCCACCAACTGTTACCCCTCTGTCTCACCGTCTCCCCAGCGATTCTGGCACAACGGTTGCGGCAACGGGGGCGAG AAAATAGCGAACAAATTGATGCCCGCTTGCAACGGGCGCAACACTATCAGCAGCAACTTCCTTCTCACTGTTTGCAACTG TGTAATGACGGTGAGTTACAACACACCCTGAACCAATTACAGCAATTACTGACCCTTGATACGCCGTTATCTGACCCCGT TGAGGATAAACCATGCAACTGA
Upstream 100 bases:
>100_bases TGATTGCCGAAGGTAAACGGGCTGACTTGATTCTGGCCCGCGCACATGGCGAGAACGTTTATGTGCAAAACGTCTGGCGT CAGGGAGCTCGGGTGTTCTG
Downstream 100 bases:
>100_bases CGCTGTTAGGCACCGGATGCGCCCAGCAAGTGCCGGTATTTGGCTGTGACTGTGTGATCTGTACACAAGCTAGCGTGGAC CCCGCACGGCGGCGTAAACC
Product: ribose 1,5-bisphosphokinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MARLIYLMGPSGAGKDCLLSALRNATPQNRVVAHRYITRPADAGAENHVALSKQEFIQRAEQGLFALHWQAHQHCYAIGI EINLWLQHGLDVLVNGSRAYLPEAQRRYRHQLLPLCLTVSPAILAQRLRQRGRENSEQIDARLQRAQHYQQQLPSHCLQL CNDGELQHTLNQLQQLLTLDTPLSDPVEDKPCN
Sequences:
>Translated_193_residues MARLIYLMGPSGAGKDCLLSALRNATPQNRVVAHRYITRPADAGAENHVALSKQEFIQRAEQGLFALHWQAHQHCYAIGI EINLWLQHGLDVLVNGSRAYLPEAQRRYRHQLLPLCLTVSPAILAQRLRQRGRENSEQIDARLQRAQHYQQQLPSHCLQL CNDGELQHTLNQLQQLLTLDTPLSDPVEDKPCN >Mature_192_residues ARLIYLMGPSGAGKDCLLSALRNATPQNRVVAHRYITRPADAGAENHVALSKQEFIQRAEQGLFALHWQAHQHCYAIGIE INLWLQHGLDVLVNGSRAYLPEAQRRYRHQLLPLCLTVSPAILAQRLRQRGRENSEQIDARLQRAQHYQQQLPSHCLQLC NDGELQHTLNQLQQLLTLDTPLSDPVEDKPCN
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3709
COG function: function code P; Uncharacterized component of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790532, Length=177, Percent_Identity=56.4971751412429, Blast_Score=197, Evalue=3e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR012699 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: NA
Molecular weight: Translated: 21918; Mature: 21787
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLIYLMGPSGAGKDCLLSALRNATPQNRVVAHRYITRPADAGAENHVALSKQEFIQRA CCEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEECCHHHHHHHH EQGLFALHWQAHQHCYAIGIEINLWLQHGLDVLVNGSRAYLPEAQRRYRHQLLPLCLTVS HCCCEEEEHHHCCCEEEEEEEEEEHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCC PAILAQRLRQRGRENSEQIDARLQRAQHYQQQLPSHCLQLCNDGELQHTLNQLQQLLTLD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC TPLSDPVEDKPCN CCCCCCCCCCCCC >Mature Secondary Structure ARLIYLMGPSGAGKDCLLSALRNATPQNRVVAHRYITRPADAGAENHVALSKQEFIQRA CEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEECCHHHHHHHH EQGLFALHWQAHQHCYAIGIEINLWLQHGLDVLVNGSRAYLPEAQRRYRHQLLPLCLTVS HCCCEEEEHHHCCCEEEEEEEEEEHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCC PAILAQRLRQRGRENSEQIDARLQRAQHYQQQLPSHCLQLCNDGELQHTLNQLQQLLTLD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC TPLSDPVEDKPCN CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]