| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yhbT [H]
Identifier: 51594848
GI number: 51594848
Start: 586194
End: 586715
Strand: Direct
Name: yhbT [H]
Synonym: YPTB0496
Alternate gene names: 51594848
Gene position: 586194-586715 (Clockwise)
Preceding gene: 51594845
Following gene: 51594849
Centisome position: 12.35
GC content: 51.72
Gene sequence:
>522_bases GTGTTGGGAAAACTACGAGCACATCTTGTGCGTCAAGGGCCAGCGCTGCTACGAGGTCCATTAAAAGTCACACCATTTGC CTTGCAGCGTCAGGTACTAGAACACGTGTTGGGCTGGCAATTCCGTCAGGCTCTGCTGGACGGTGAGTTGGCGTTTCTTG AGTCTCGTTGGTTAAAAATCGAGGTCCGTGACCTTGCGTTACAATGGTTTGTGACGGTAGAAAATGGCAAGCTGCTCGTG AGCCAACAGGCTGACGCCGATGTCAGCTTTAGCGGTGATGCCAACGATCTGATCTTGATCGCTGCCCGTAAAGAAGATCC GGATACGCTGTTTTTCCAGCGCCGGTTACGTATTGAAGGGGATACCGAATTGGGCCTGTATGTTAAAAATTTAATGGATG CCATTGATTTGGAATCCATGCCGACGCTACTGCGTGTTGGTTTGCAACAGTTGGCTGAGTTTATCGAAGCGGGTCAGCAA GAGGGCGCGGTGGCAACTTCCCGCGGACTGGCATCGTGTTGA
Upstream 100 bases:
>100_bases CCATTTTCATAGGTTAGCAATGTGGCAGAATAGCGGTACTTGGCATTGTCATTTTATTCAGTGCTATCATTTTATTCAGG ATTACAAGGAGTCACTGCCT
Downstream 100 bases:
>100_bases TCCGGGTTGAAATTCCGGTTGATGCGCCGGGGATCGATGCTTTACTGCGTCGGGCATTCCAGCAGGGTGATGAGGCGGAG CTGGTACAACAACTGCGCGA
Product: lipid carrier protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MLGKLRAHLVRQGPALLRGPLKVTPFALQRQVLEHVLGWQFRQALLDGELAFLESRWLKIEVRDLALQWFVTVENGKLLV SQQADADVSFSGDANDLILIAARKEDPDTLFFQRRLRIEGDTELGLYVKNLMDAIDLESMPTLLRVGLQQLAEFIEAGQQ EGAVATSRGLASC
Sequences:
>Translated_173_residues MLGKLRAHLVRQGPALLRGPLKVTPFALQRQVLEHVLGWQFRQALLDGELAFLESRWLKIEVRDLALQWFVTVENGKLLV SQQADADVSFSGDANDLILIAARKEDPDTLFFQRRLRIEGDTELGLYVKNLMDAIDLESMPTLLRVGLQQLAEFIEAGQQ EGAVATSRGLASC >Mature_173_residues MLGKLRAHLVRQGPALLRGPLKVTPFALQRQVLEHVLGWQFRQALLDGELAFLESRWLKIEVRDLALQWFVTVENGKLLV SQQADADVSFSGDANDLILIAARKEDPDTLFFQRRLRIEGDTELGLYVKNLMDAIDLESMPTLLRVGLQQLAEFIEAGQQ EGAVATSRGLASC
Specific function: Unknown
COG id: COG3154
COG function: function code I; Putative lipid carrier protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789547, Length=160, Percent_Identity=72.5, Blast_Score=235, Evalue=1e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003033 - InterPro: IPR016830 [H]
Pfam domain/function: PF02036 SCP2 [H]
EC number: NA
Molecular weight: Translated: 19340; Mature: 19340
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGKLRAHLVRQGPALLRGPLKVTPFALQRQVLEHVLGWQFRQALLDGELAFLESRWLKI CCCHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEE EVRDLALQWFVTVENGKLLVSQQADADVSFSGDANDLILIAARKEDPDTLFFQRRLRIEG EHEEEEEEEEEEECCCEEEEEECCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCC DTELGLYVKNLMDAIDLESMPTLLRVGLQQLAEFIEAGQQEGAVATSRGLASC CCHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCC >Mature Secondary Structure MLGKLRAHLVRQGPALLRGPLKVTPFALQRQVLEHVLGWQFRQALLDGELAFLESRWLKI CCCHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEE EVRDLALQWFVTVENGKLLVSQQADADVSFSGDANDLILIAARKEDPDTLFFQRRLRIEG EHEEEEEEEEEEECCCEEEEEECCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCC DTELGLYVKNLMDAIDLESMPTLLRVGLQQLAEFIEAGQQEGAVATSRGLASC CCHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]